Crotalus tigris (Tiger rattlesnake): 120313546
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Entry
120313546 CDS
T08476
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120313546 (DDX4)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120313546 (DDX4)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120313546 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120313546
NCBI-ProteinID:
XP_039211503
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MERAFCMAERRLLSWWEVSGHIKGCVLSLLSFSLSLRVYFPSWQEGVELADAAMDDENWD
TEFTKGVSGEESRAMPVFQPSFQKPGSTPMRTNETLCNFTQSVKQPENRNGEEKQTGRFG
SGRIFGNRGNRFEERKSSSFERGFQRMNDDVGVLRRPGRGSFRNDRVGFGQFTNDVNVNQ
DGKQNSVSLGFKRRGFGTSSGDFESRRGFEARGDYKGSSEENVASERNPKVTYVPPPPPD
DENSIFAHYQTGINFDKYDNILVEVSGLDPPPAILTFEEADLCETLIKNIARAGYFKLTP
VQKYSIPIVLAGRDLMACAQTGSGKTAAFLIPILAHMMRDGVTASQFKGEQEPECIIIAP
TRELINQIFLESRKFSYGTCIRPVVIYGGIQMSHTIHQIKQGCNILCATPGRLLDIIGRQ
KIGLSKLKYLVLDEADRMLDMGFGPDIKKLISSPGMPSKDKRQTLMFSATFPDEIQRLAG
EFLKTDYLFVVVGQVGGACSDVQQTILQVKQYDKKDKLVEILNEIGNKRTMVFVETKKKA
DFFATLLCQENISTTSIHGDREQREREEALHYFRTGRCPVLVATSVAARGLDIENVQHVI
NVDLPSTIDEYVHRIGRTGRCGNIGKAISFFDLQADSAIAQPLIKVLADAQQEVPAWLEE
IACGSGGIGFSNPKENVFAAVDSRKVFHGKDNPHSGGFAASNILVADESWD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggccttctgtatggcagagcggcgtctcttgagttggtgggaggtctccggc
catattaagggctgcgttttgtctctcctcagtttcagtttgtcgcttcgagtgtatttc
ccctcttggcaggaaggcgtggagttggccgacgctgccatggatgacgagaactgggat
acggagtttacaaaaggtgttagtggagaggaaagccgggccatgcccgtcttccagccc
agcttccagaagccgggcagcacacccatgagaacaaatgaaaccttgtgcaatttcact
cagagtgtaaaacagccagagaatcgtaatggtgaagagaaacaaacaggtagatttgga
agtggaagaatttttggaaacagaggaaatagatttgaagaacgaaaatcttcaagtttt
gaaagaggttttcagagaatgaatgatgatgttggtgttcttcgtagacctgggagagga
tcattcagaaatgatagagtaggatttgggcaatttacaaatgatgtaaatgtgaaccaa
gatggaaaacaaaattctgtcagcttaggttttaaaagaagaggctttggtacttcatca
ggtgattttgaaagtagaagaggctttgaagccagaggggattacaaaggaagcagtgaa
gaaaatgtagcttctgaaagaaatccaaaggtgacatacgtaccaccacctccaccagat
gatgaaaatagtatctttgcacattaccagacaggaataaattttgataaatacgataat
attcttgtggaagtttcagggcttgatcctccaccagcaatattgacttttgaagaagct
gatctgtgtgaaaccttaataaaaaacattgctagagctggatattttaaacttactcct
gtgcaaaaatatagtattcctattgtgctggcaggacgtgacttaatggcatgtgcacaa
acaggatctggaaaaacagcagcttttcttataccaattttagctcatatgatgcgagat
ggagtgactgctagtcaattcaaaggggaacaagaaccagaatgcataataatagcacca
actagagaactgataaatcagatctttctggaatcaagaaaattttcatacggaacttgt
ataaggcctgttgtgatttatggaggtatacaaatgagccatacaattcatcagataaag
caagggtgtaatatattgtgtgctaccccaggaagacttttggatatcataggcagacaa
aagattgggctcagcaaattaaaatatttggtgttagacgaagctgatcgtatgctggat
atgggatttggccctgatataaagaaattaatttcatctccaggcatgccctcaaaagac
aaacgccaaacattaatgtttagtgccacttttcctgatgaaatccaaaggctcgctgga
gaatttttgaagacagattatttatttgttgttgttggacaagtgggaggagcatgcagt
gatgttcagcagaccatacttcaagtgaaacagtatgacaagaaagataaacttgttgaa
attcttaatgaaataggcaataaaagaaccatggtgtttgtggaaacaaagaaaaaagca
gatttttttgcaactttactttgccaagaaaacatatcaaccacaagtattcatggtgac
cgggaacagagagagagagaggaagcacttcattattttcgtactggaagatgtcctgtt
cttgttgctacatctgtagcagcaagaggtctggatatagaaaatgttcaacatgttata
aatgttgatctcccttccacaattgatgaatatgttcataggattggacgaactggccgt
tgtggtaatataggcaaagcaatttctttctttgatcttcaagcagacagtgccattgca
cagcctctaatcaaagtgcttgcagatgctcagcaagaggttccagcatggttagaagaa
attgcttgtggttcaggtgggattggttttagtaatccaaaggaaaatgtgtttgcagct
gttgattcccgaaaggttttccatggcaaagacaatcctcacagtggaggatttgcagca
tcaaatatacttgtagcagatgagtcctgggattaa
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