Crotalus tigris (Tiger rattlesnake): 120313827
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Entry
120313827 CDS
T08476
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120313827
Membrane trafficking [BR:
ctig04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
120313827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
120313827
NCBI-ProteinID:
XP_039212103
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MLKMGFLKSADNFCISIDIWNKTGAVKLIRWSPDNCVVMVTWECGGLSLWSVFGAHLICT
LGGDFIHRTDGTKKDPLKISSMSWGSEGYHLWVIDANNFGNSVTESKNKGQHFGILQFQF
IKSALAVNPCISSQEQVLLQGEDRLYLNCGDVVQAQNPRSSSAHAEHKTVRERGQFSYEN
LDSQGLSTLLGHRHWHVVQIHNIYLEINWPIRFSAIDKMGQNVAVVGKYGFAHYSLLSKK
WKLFGNITQEQNMTVTGGLAWWNDFIVIACYNLSDRQEELRVYLRTANLDNAFAHITKVQ
AETLLLSVFRDIIILFRADCSICLYSIKRKSDGPNPTTSIQVLQEVSMSRYIPHPFLVVS
VTLTSVRTETGISLKMPQQACEAESIMLNLAGQLIMVQRDRSGPQIREKESSPNQRKLLP
FCAPVVLAQSVENVWTTCRSNKQKRHILEALWLSCGGSGMKVWLPLFPRDHRKPHSFLSR
RIMLPFHINIYPLAVLFEDALVLGAVNDTVLYDCLYTHSSAVEHLEVLFPFCIVERTSQI
YLHHILRQLLVRNLGEQALLLAHSCAALPYFPHVLELMLHEVLEEEATSRDPIPDPLLPT
VAKFITEFPLFLQTVVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIIL
QNMEVPAVSRQHATLLFNTALEKGKWDLCRHMIRFLKAIGSGESETPPATPTTQEPTSSG
GFEFFRHRSISLSQSGETLPAGKFNLQKTLSMPSGPSGKRLSKESDCAENMYIDMMLWRH
ARRLLEEIRLKDLGCFAAQLGFELIGWLCKERNRAAHVDDFVTALKKLHNDFLWPFPIIP
VCSINSPLKNGKCRTVIGEQLLKSQSADSFLNMEIDSGLPDVPRSHSWFGAISSSQREMD
TASSHGPQMQEAFLSPLLSKVGDEGSIGSATDLTETSSIVDGDWTMVDENYSTLSLTQSE
LEHISLELASKGPHKSQVQLRYLLHIFMEAGCLDWCMVIGLILRESSVVNQVFSLAQSSE
VDGEMLQNIKTGLQAVESWASVDCPGYKPFLTIIKPQLQKLSEISEEQVPLEVFQPTNLS
RVAEQASPRVEENRISANHSASPQNEAGPNTSIRHDEDMLGLEKEDHPLQEGSYDCTVS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatgggttttttaaaatctgccgacaatttttgtatttcaatagatatttgg
aacaaaacaggagctgttaaactcatcagatggtctcctgataattgtgttgttatggtg
acctgggaatgtggaggcctgtctttatggagtgtatttggagcccatcttatttgtact
ctaggaggtgactttattcatcgaactgatggtactaaaaaggaccctttaaagatcagc
tctatgagctggggatcagaaggctatcatttatgggtaatcgatgcaaataattttggg
aattcagtgactgagagcaaaaacaaaggacagcattttggtattttgcaatttcagttc
atcaaaagtgcactcgcagttaatccttgcataagcagccaggagcaggtcctccttcag
ggagaagatcgcttatacttgaactgtggtgatgtagtgcaagctcagaatcctagaagt
tcctcagcacatgctgaacataagactgtcagagaaagaggccaattttcatatgagaac
ttagattctcagggtttaagcactttattagggcacagacattggcatgttgtacagatt
cacaatatatatttagaaatcaactggcctataaggttttcagccattgataagatgggg
cagaatgtagctgtagttggcaaatacggctttgcacattactctctgctttccaaaaaa
tggaaattgtttggcaacattacccaggaacaaaatatgactgttactggaggcttagca
tggtggaatgacttcattgtcattgcatgttacaacttaagtgaccgccaggaagagcta
agagtatatttacgaacagccaatctggacaatgcatttgctcatatcaccaaagtgcag
gcagaaacattattgctcagcgtctttcgggacatcataattttgttcagagcagactgt
tccatttgcctttatagtattaaaagaaaatctgatggccctaatcccactacaagtatt
caggttctgcaagaggtgtctatgtcacgttatattcctcaccctttccttgttgtgtct
gttactttaacatcagtaagaacagagacaggtatcagcttgaaaatgccacagcaggcc
tgtgaagcagagagcattatgttaaatttagcaggacagttaatcatggtacagagggat
cgatcaggtcctcagatacgagaaaaggagagtagtcccaaccaaaggaaacttctgcca
ttttgtgctcctgttgtacttgcccagtctgtagaaaatgtttggacgacctgccgttct
aacaaacagaaacggcacatattggaggctctatggctcagctgtgggggatcaggtatg
aaggtctggcttcctttgtttcccagggaccatcgcaaaccacattcctttctttcaaga
cggatcatgctgcctttccacattaatatctaccccttggctgttttgtttgaagatgcc
ttggttcttggtgctgtcaatgacactgtgctttacgactgtttatacactcacagcagt
gctgttgaacatttagaggtcctcttccccttctgtattgttgagagaacatctcagatc
tacctccatcacattttacgccagcttttggtgaggaacctaggtgaacaagccttgctt
ttggctcactcttgtgccgcattaccgtattttcctcatgtactagaactgatgctccac
gaagtgctggaagaagaagctacctcgcgggatcccattcccgatcctctccttcccact
gtggctaaatttattacagagttccccctcttcctacagactgttgttcattgtgctaga
aaaacagaatatgccctgtggaattatctctttgctgctgttggaaatccaaaagacttg
tttgaagagtgtttaatggcccaggatttagacacagctgcatcttaccttattattctg
cagaatatggaagttccagcagttagtaggcagcatgcaactctgctattcaatacagct
ttggagaaaggaaagtgggatctttgtcggcacatgatcagatttctgaaagccattggc
tctggagaatccgaaactcctcctgctacaccaacaactcaggaacctacttcaagtggt
ggctttgaattcttcagacatcgcagtattagcttgtctcaatctggagagacacttcca
gctggcaaatttaacttgcaaaaaaccttgagcatgccatctggcccgtctgggaaaaga
ttgagtaaggaaagtgattgtgctgagaacatgtatattgacatgatgttgtggagacat
gctcgacgtcttctggaagaaatcaggcttaaggatcttggttgttttgctgcgcagctg
ggctttgagttgataggctggttgtgcaaagagcgtaaccgagctgcccatgtggacgat
tttgtgactgccttgaagaaattacacaatgattttctttggccatttcccattatccca
gtgtgctccataaattcacctctgaagaatggaaaatgtaggacagtaataggtgaacaa
ctcttaaaatcacagtctgctgacagctttttaaacatggaaatagacagtggcctccca
gatgtaccaaggagtcatagctggtttggtgccatcagctcctcccaaagagagatggat
acagcatcctcccacggccctcaaatgcaggaggcatttctctcacctttgttaagtaaa
gtgggtgacgaggggagcattggctctgccacggacctgacagaaacaagctctattgtg
gatggagactggactatggtggatgaaaattattccaccttgagtctgacgcaatctgaa
ttggaacatatctctttggagctggccagcaaagggccacacaaatcacaagttcagctg
cggtatttgcttcatattttcatggaagcaggatgcctggactggtgcatggtcataggc
ctcatccttcgagaatcctcagtcgtcaatcaagtgtttagtctagcgcagtcttcagag
gtcgatggggagatgttgcagaacattaagacaggactgcaggcagtagaaagctgggct
tctgtagactgtcctggctataagccatttttaaccattatcaagccacaactgcagaaa
ctgagtgagatatcagaggaacaggtgccactggaagtctttcagcctacaaatctatca
agggtggctgaacaagccagtccaagggtggaagagaaccggatttcagctaaccacagc
gctagccctcaaaatgaggctggtcctaatacttcaattcgacatgatgaggacatgctt
ggactggagaaggaagaccatccccttcaggaaggcagttatgattgtactgtctcctga
DBGET
integrated database retrieval system
