Crotalus tigris (Tiger rattlesnake): 120313872
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Entry
120313872 CDS
T08476
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120313872 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120313872 (DROSHA)
03009 Ribosome biogenesis [BR:
ctig03009
]
120313872 (DROSHA)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120313872 (DROSHA)
Enzymes [BR:
ctig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
120313872 (DROSHA)
Messenger RNA biogenesis [BR:
ctig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
120313872 (DROSHA)
Ribosome biogenesis [BR:
ctig03009
]
Eukaryotic type
90S particles
RNase
120313872 (DROSHA)
Prokaryotic type
rRNA processing factors
120313872 (DROSHA)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
120313872 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
120313872
NCBI-ProteinID:
XP_039212183
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRGRGGATVRASSQTFRPQNLRQLHPQQSSVQYQYDQPTATTSIYVNTPAA
NYVPPRPDFVPYPPPIPPSAQSSVTQCPPRPPFSGPQMRQTFPLPPCFPPAPPPVPNPGN
PPIVANATGQNTFPYMMPPPSIPHPVPPPVMPQQVNYQPVYSPGYSQQTFSPPNFNSYQH
NANSYQSNSGSASSSGNTSSNLRHPSEYLVEKSQTDWRSPERSKYYDEHRHRDHCHGHGD
RHRSTNHGDRRDRGRSPDRRRAESSRHRSDYVRGRTPPRHRSYEWYREHQRERHRHRDSR
RSPSTEKSYRKDHKRTGSRSPSQDRKRPRWEEDRERWSENANREKSYTSIKDKEPEEAAG
EKNEEEEEDLLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSRLRDLYEKFEEDLGKRQA
KAKAARPPWEPPKTKLDEDVGNSSDSECDSEDDSCSSSSDSEVFDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLFHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFSHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLIGPSSENSDTSCPRFHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCNKPLVPEEEIANMLQWEELEWQKYAEECKGMIVTSSGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
VQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMH
LDRLIGYTFKDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMR
KKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLAT
YRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNNKDLREVWLNYPLHPLQLQESSTDRQLIETSPVLQKLTEFEDAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMCAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWE
REHQEKDLDDSEDMRK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcattctggacgtggatgcccccggggccgaggaggagccactgttcgagct
tcatcacaaacctttcgtccccaaaacttgagacagctacaccctcagcagtcttcagtg
cagtatcagtatgaccagccaactgcaaccacctctatctatgtgaacactccagctgca
aactatgtccctcctaggccagattttgtcccgtatcccccaccaatccccccttcggct
caaagttcagtcacccaatgtccgccccggcctcctttttcaggccctcagatgaggcag
actttcccacttcctccttgttttcccccagctcctccccctgtcccaaaccctggtaac
cctcccattgtagccaatgcaactggacaaaacacattcccttacatgatgccacctccg
tccataccacatcccgtgcctccaccggtaatgcctcaacaagtgaattaccagcctgtg
tattctccaggatactcccagcagaccttttcgcctcctaactttaatagctaccaacac
aacgcaaactcttaccaaagcaacagtggtagcgctagtagcagtggtaacaccagcagt
aacctccggcatccaagtgaatacctggtagaaaaatctcagactgactggaggtctcca
gagaggagtaaatattatgacgaacatcgccatcgggatcactgccacggacatggggat
cggcatcgctccactaatcatggggaccggcgggatcgagggaggagcccagatcgccgg
cgggcagaaagcagtcgtcatagatcagattatgtcagaggaagaaccccaccccgccat
cgaagttatgaatggtacagggaacatcaaagggaaaggcacagacaccgggatagtcga
cgatcaccatctacagaaaagtcctataggaaagatcacaaaaggacaggaagtcgatct
cctagccaggaccgaaagagaccccgttgggaagaagacagggagaggtggtcagaaaat
gccaatagagagaaaagttatacctccatcaaggacaaagagccagaagaagctgcaggt
gaaaagaacgaggaagaagaagaggatctactgaagccggtgtgggttcgttgtacccat
tcagaaagctactattcaaatgatcccatggatcaagtgggggattccacagtggtggga
acgagccggctcagagatttgtatgaaaaatttgaagaagacctaggaaagcgtcaagca
aaggccaaagctgccaggcctccatgggagccacctaagactaaactggatgaagatgta
gggaactccagtgattctgagtgtgactcagaagatgacagctgttccagcagttctgac
tcggaggtttttgatgtcattgctgaaattaagcggaagaaggcccaccctgatcgcttg
cacgaggagctgtggtacaatgatcctggacagatgaatgacgggcctctttgcaaatgc
agtgccaaagccaggagaactgggataagacatggaatttatcctggagaagagcctatt
aaaccctgccgtcctatgaccaacaatgctggaagactgttccattaccgcattacggtg
tcacctcctaccaacttcttaacagacagacccaccgtcatagagtacgatgaccatgaa
tacatttttgaaggattttccatgttttcccacgctcctctcacaaatattcctctgtgt
aaagtaatcagatttaacattgattatacaattcatttcattgaggagatgatgcctgaa
aacttttgtgtccgaggcctggaacttttctcttcctatctcttcaaagatattttagaa
ctgtacgattggaatttgattggtccttcatcagaaaacagtgatacttcatgtcctcgg
ttccatttcatgccacgcttcgtaaggtttcttccagatggcggaaaggaagttctgtca
atgcatcagatcctcctgtatttgttacgctgcaataaacctctcgtaccagaagaagag
attgccaatatgctacagtgggaagagctggagtggcagaaatacgccgaagaatgtaaa
gggatgatagtgaccagctctggcatgaaacccagttctgttcgtattgatcagttggat
cgtgaacagttcaaccctgatgtgattacttttcccattatcgtccattttggaatacga
ccagctcaacttagttacgctggagatccacaataccaaaaactctggaaaagttatgtg
aaattacgccacctgctggctaatagtcccaaagtgaaacaagcagataaacagaaatta
gttcagagagaagaagccctgcaaaaaatcagacagaagaataccatgcggcgggaagta
actgttgaactgagcagccaaggattctggaagacgggaattcgttctgacgtctgtcaa
catgccatgatgcttcctgtcttaacacaccacatccgttaccatcagtgtctgatgcat
ttggacagactgataggctacacttttaaagaccggtgtttactgcagcttgccatgact
cacccaagccatcacttgaactttggaatgaatccagaccatgccagaaattctttatca
aattgtggaattcggcaacccaaatatggagataggaaagttcaccatatgcatatgagg
aagaaaggtataaacactttgatcaatattatgtcacgtcttggtcaagatgatccaact
ccttccaggattaaccataatgaacgcttggaatttttgggagatgctgtggttgagttt
ttaacgagtgtccatctgtactatttgtttccaagcttggaggaaggaggattagcaaca
taccgcactgccattgttcagaatcagcatcttgcaatgctggctaagaagctggagctg
gatcgttttatgctttatgctcatggacctgatttatgccgagaatcagacctgcggcat
gcaatggccaactgctttgaagcattgataggggcagtttacctggagggaagtcttgaa
gaagccaaacaattgtttggacgtttgctctttaacaacaaggacctgcgggaagtatgg
cttaattatccgctacaccctctgcaactgcaagaatctagcactgacagacagctaatt
gaaacgtctcctgtcctccagaaattgactgagtttgaagatgcaattggagtaattttt
actcatgttcgcctcttggcacgggctttcactttgagaacagtgggatttaaccatctg
acgttgggccataatcagaggatggagtttttgggtgattccataatgcagttggtggcc
accgagtacttattcatacatttccctgatcatcatgaaggccacttgacgttgctgcga
agctctttggtcaacaacagaacgcaagccaaagtggcagaagaactgggcatgcaggag
tttgccattactaacgataagaccaaacggcctgtggcactgcgaacaaaaacattagct
gatcttttggaatcctttatcgcagctctgtacatagataaagaccttgaatatgtccac
accttcatgaacgtatgctttttcccgcgattgaaagaattcatcttaaatcaggattgg
aatgatccaaagtcccaactccagcaatgctgtttaactctcagaacagaagggaaggag
ccagatattcctctttataaaacactgcaaacagttgggccttctcatgcaaggacatac
accgtggctgtttatttcaaaggcgagagaataggatgtgggaagggaccaagcattcag
caagcggagatgtgtgcagcaatggatgcactggaaaaatataattttcctcagatggcc
catcaaaaacggttcattgaacggaagtaccggcaagagcttaaagaaatgaggtgggaa
cgagaacatcaagaaaaagatctggatgattcagaagacatgagaaaataa
DBGET
integrated database retrieval system
