Crotalus tigris (Tiger rattlesnake): 120314253
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Entry
120314253 CDS
T08476
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120314253 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ctig01007
]
120314253 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctig03016
]
120314253 (VARS1)
Enzymes [BR:
ctig01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
120314253 (VARS1)
Amino acid related enzymes [BR:
ctig01007
]
Aminoacyl-tRNA synthetase
Class I (U)
120314253 (VARS1)
Transfer RNA biogenesis [BR:
ctig03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120314253 (VARS1)
Prokaryotic type
120314253 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1_2
tRNA-synt_1g
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
GST_N_5
tRNA-synt_1e
GST_C_3
Jag_N
Motif
Other DBs
NCBI-GeneID:
120314253
NCBI-ProteinID:
XP_039213072
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MPTLYICPHPDNFQNVRVLVSARYGRQELTVVELPPNAEFKNRFFSLPKLPALETRAGVY
VSGPAAVSYLLSPDVMRGHTPEARALVRQWISYADMEIAPAACAVAFSSLRVSKQNKQGL
DRAVAELQHLLGVLDSHLKLRTYLVGETMTLADVTAACSLLLPYKYVLNQTLRTYFINLT
RWFLTCINQPEVQAVLGPVRLCEEAPGGGVLELDFKVSSEAELLEKKQVQEPPPKSESQL
KKEAKKKEKMHKFLQKKEKSLQQQGEKKPKAEKKDKKDLGIITYDVPTKQGEKKDVTGPM
PDSYSPQYVEAAWYSWWESQGFFKPEYGRHSISEPNPKGIFMMCIPPPNVTGSLHLGHAL
TNSIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWKEQGKTRHDLGREPFIEEV
WKWKNEKGDRIYHQLKKLGSSMDWDRACFTMDPKLSYAVQEAFIQLHEKGIIYRSKRLVN
WSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKMEDSDEEVVVATTRI
ETMLGDTAIAVHPKDPRYQHLHGRKVQHPFTGRLLPIVCDDFVDMEFGTGAVKITPAHDQ
NDYEVGLRHGLEFLNIMNENGYLINVPPPFLGMKRFEARQAVLEALKEKKLFKEVKDNPM
VVPVCSRSKDVVEPLLKPQWYVRCDTMAQAAAEAVRRGDLRIVPDFHLKTWFAWMDNIRD
WCISRQLWWGHRIPAYFVTIDDPSVPAGEDVDGKYWVSGRSKEEAKEKAAKAFNISPDKI
SLQQDEDVLDTWFSSGLFPFSIFGWPNLSEDLQVFYPGTLLETGHDILFFWVARMVMLGL
TLTGKLPFREVYLHAVIRDAHGRKMSKSLGNVIDPLDVITGITLQGLHAQLSDSNLDPVE
LERAKKGQKSDYPNGIPECGTDALRFALCAYTTQGRDINLDVNRILGYRYFCNKLWNATR
FAIRGLGEGFQPPASPELSGSESLVDLWILSRLSHAVELCDVGFRAYDFSGITTAVYNFW
LYELCDVYLECLKPVFAGSDQAAIQTAQNVLYTCLDAGLRLLSPFMPFVTEELFQRLPRR
SPSSDPPSICVTPYPTTEQFHWRNEELDHTFDFILNIIKAVRFLRADYNLTKTKADCYLQ
CLDLQTAETVTRCSEYICILSSSKQVLVLEPGQIPPSGCAVAIASDKCIVHLLLKGLIDA
EKEIAKLTGKKAELQKQILLLRQRMVNPEYAVKVPAKVQELDAAKLKQSETELQKADEAL
QNFKKMI
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccctctacatctgcccccatcctgacaacttccagaacgtccgtgtgttggtc
tcagcccgttatggccggcaggagctcacggtggttgaacttcctcccaatgctgaattc
aagaatcgttttttctctctgcccaaactcccagctctggaaaccagagcgggggtttat
gtctcggggcctgccgctgtttcttacctgctgtctccagatgttatgagagggcacact
cccgaagcaagagccttggtgcggcagtggatcagctacgctgacatggaaatcgctccc
gccgcctgtgctgtcgctttctcttccctcagagtttccaagcaaaataaacaggggctg
gatcgtgctgtagcagaactgcagcatctccttggggtgctggacagtcacctgaagctt
cggacgtacctggtgggggaaaccatgaccttggccgatgtgaccgctgcttgttctctt
ttgttgccgtataaatatgtcctcaaccaaacccttcgcacttattttatcaaccttact
cgatggttcctgacatgtatcaaccaaccagaagtccaggctgtcttgggcccagtgagg
ttgtgtgaagaggccccaggaggaggtgttctagaactggactttaaagtttcctctgaa
gctgagttgctggagaagaaacaggtacaggagccccctcccaaaagcgagtcacagctg
aagaaggaggccaaaaagaaagaaaaaatgcacaagtttcttcagaagaaggaaaagagt
ctgcagcaacagggagagaagaagccaaaagctgagaagaaagacaagaaggatctcggg
atcatcacctatgatgtccccaccaaacaaggggagaaaaaagatgtgacgggtccaatg
cctgactcttacagcccacaatatgtcgaagcagcttggtactcatggtgggagagccag
ggtttctttaaacccgagtatggccgtcacagcatctccgagccaaaccccaaaggcatc
ttcatgatgtgtattcctccacccaatgttaccggatcgctacatcttggccatgccctc
accaactccatccaggactctctgacaagatggcacagaatgaggggggagaccaccttg
tggaatcctggctgcgaccacgcaggcattgccacccaggtggtggtagagaaaaagctt
tggaaggagcaagggaaaacacggcatgacctcggccgtgagccgttcattgaggaagtc
tggaaatggaaaaatgagaaaggggatcggatctaccatcagctgaagaaattgggttcc
tccatggactgggacagagcttgtttcacgatggaccctaaactctcctatgctgtccaa
gaagcctttatccaattgcacgagaaagggatcatctatcgaagcaagcgtctggtcaac
tggtcctgcactctcaactcggccatttctgacatagaggtggataagaaagaattaaca
ggccggaccctcttgcctgtcccgggctacaaagagaaggttgagtttggggtgctggtc
tccttcgcttacaagatggaggactcagatgaggaagtggtggtggctaccacccgtatt
gagacgatgctgggagacacagcaattgcagtccatcccaaggacccccgataccagcat
ctgcatggccggaaagtccagcatcctttcacaggacgcctcctgcctattgtctgcgat
gattttgtagatatggaatttggaactggtgccgtaaagatcacgccagctcatgatcag
aacgactatgaagttggcctgcgtcacggactcgagttcctcaatattatgaatgagaac
ggctacctcatcaacgttcctccacccttcttgggcatgaagcgttttgaagcccgtcaa
gcagtgctggaagctttgaaggaaaagaagcttttcaaggaggtgaaggacaaccccatg
gtggtcccggtgtgcagtcgctccaaagacgtagtggaacccctgctgaagccccagtgg
tacgtgcgctgcgacacgatggcccaggctgcagccgaggccgtgcgccggggtgacctg
cgcattgtgccagacttccatctcaaaacctggttcgcttggatggacaatatcagggat
tggtgtatttctcggcagctctggtggggccatcgtattccagcatattttgtgactatt
gatgacccctctgtgccagcaggagaggatgtggatggcaaatactgggtgagcggtcgg
agcaaagaagaagccaaagaaaaggcagccaaagccttcaacatcagcccggataaaatc
tccctccagcaagatgaggacgtcctggacacctggttctcctccggcctgttccctttc
tccatctttgggtggcccaatttaagtgaagatcttcaggtcttttacccaggaaccctc
ctggagaccggacatgatattctgttcttttgggtggcccgaatggttatgttgggcctc
acgctgacaggaaagttacccttcagagaggtttaccttcacgcggtcattcgggatgct
catggcaggaagatgagcaaatcattgggaaatgtcatagatccattggatgtgatcacc
ggcattactctgcagggtctacatgctcagttatcagacagcaatttggacccagttgag
ctggagcgagccaaaaagggacagaaatcagattaccccaacgggatcccagaatgcggg
actgatgcccttcggtttgctctttgtgcttacacaactcaaggccgggatataaacctg
gacgtgaatcggattctgggctaccgctatttctgcaacaaactctggaatgccaccaga
tttgccatccgtggtcttggggagggcttccaaccacccgccagtccagagctcagtggc
tccgagagcctggtggacctctggatcttgagtcgcctcagccacgccgtggagttatgc
gatgtgggatttcgggcctacgacttctctggcatcaccaccgcagtgtacaatttctgg
ctgtatgagctgtgtgatgtctacctggagtgcctaaagcctgtgtttgccggatcagac
caggctgcgattcagacggcccagaacgttctttacacctgcttggatgctggccttcgt
ctcctcagtcctttcatgccttttgtcaccgaggaactctttcagcgtctgcctcgacgg
tctccttcctctgaccctcccagcatctgtgtcactccttaccccactactgagcagttc
cattggaggaatgaagaactggaccatacctttgacttcatattgaacatcattaaggct
gtgcgttttctccgggcggactacaaccttaccaaaaccaaagctgactgttacctgcag
tgtttggatcttcagacagcggagaccgtgactcgttgctctgaatatatctgcattctt
tcctcctccaagcaagttttggtactagaacctgggcagattcctccttctggctgtgct
gtagctatagcttccgacaaatgcattgtccatcttctgctgaagggtttgattgatgcg
gagaaggagatagccaaactgacagggaaaaaggcagagctgcagaaacaaatcctatta
ttacgccagcgtatggtgaatccagagtatgctgtgaaagtaccggccaaagtccaagaa
ttggatgcagccaagctgaaacaaagcgagacagaactgcagaaggcggacgaagctctt
cagaatttcaagaagatgatctga
DBGET
integrated database retrieval system
