Crotalus tigris (Tiger rattlesnake): 120314394
Help
Entry
120314394 CDS
T08476
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120314394 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120314394 (TRIP12)
Enzymes [BR:
ctig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120314394 (TRIP12)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
HECT type E3
120314394 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
120314394
NCBI-ProteinID:
XP_039213370
LinkDB
All DBs
Position
Unknown
AA seq
2069 aa
AA seq
DB search
MSNRPNNSPGGSLRRSQRNTVGAQSQDDAVGGRSHLGQAKHKARSPSESRKSISKAPKVQ
SNTTTEQSKGHFSKRGCSSSAIIIPQQEALDTDSTLEQQKTGQVPKRDSSQGVKRSASPD
YNQTNSPSPAKKTKALQHADSSSDLERNKSQTKSKKRHLHQEQESKSSQLPSTSKAHTRK
GGATVSSRSQKRKRTETLTIVKSRSATESTGSEERPAKPTKLASKSVSSAKAGCSTITDS
SSSASTSSSSSVVASASSAVSQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEQNKIGG
SSKFDWAARFSPKVSLPKTKLSLPGSSKPEASKPGPSGLQAKLASLRKSTKKRSESPPAE
LPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARADEA
PQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRT
IGSGASSKAQQLLQGLQATDESQQLQSVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQ
MEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLS
RRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQR
LTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIM
VVRMFSLMCSNCPMLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSL
ICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVG
EDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTSTSGHPESKKDDARAQL
MKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAV
SSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESETLLTSP
PKVCTNGSGTLSATTTVSTGTATSASNAVSDLGSPSLQHSREDSLDLSPQGRLSDVLKRK
RLPKRGPRRPKYSPPRDEDKVDNQAKSPTATQSPKSSFLASLNPKTWGRLSTQSNSNNIE
PARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVDRYFSSENMDGSNPALNVLQRL
CTATEQLNLQVDGGVECLVEIRSIVSESDVSSFEIQHSGFMKQLLLYLTSKGEKDAVSRD
VRLKRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGN
GTGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLV
VRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAV
RQFSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDSNKDCVGGKRGRAQTAP
TKTSPRNAKKHDELWHDGICPSVSNPLEVYLISSPPESITFEDPSLDVVILLRVLHAISR
YWYYLYDNASCKEIISTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKSCPFFFP
FDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAE
SVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGS
QEGTKYIHNIQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFY
KWMLRQETSLTSHDLFNIDSVVAKSVYHLEEIVRQKRRLEQDKSQTKESLQYALETLTMN
GCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRD
GFESVFPLSHLQYFYPEELDQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKFLFEIL
SSFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYL
KLPDYSSIEIMREKLLIAAKEGQQSFHLS
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacagtccaggggggtcactgcgacgttcacaaaggaacaca
gtcggggcccaatcacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacgtagcccttctgaaagtagaaaatctatttcaaaggcacccaaagtgcag
tccaatactactactgaacagtccaaaggacacttttctaaaagaggctgtagctcatct
gctattataattccacaacaagaggctctggacacagacagtactttagagcaacaaaaa
actgggcaggtgcctaaaagagacagctctcaaggagtgaaacgcagtgctagcccagat
tacaaccagacaaattctcctagccctgccaaaaaaaccaaagcacttcagcacgctgat
tcttcttcggacttggaaagaaataaatctcagactaagtctaagaaaagacatttgcat
caagagcaagagtcaaagtcttcacaattgccatcaaccagtaaagctcacaccagaaag
ggtggagctactgttagctccagaagccagaaacggaaaaggaccgaaaccttaactatt
gtaaagagtcgttcagcaactgaatcaactggcagtgaagagagaccagcaaaacccacc
aagctggcttcaaaatcagtgagctcagccaaagctgggtgcagtaccatcacagattcc
tcctcttcagcctctacatcttcctcctcctctgttgttgcttctgcatcttctgctgtt
tctcaaggtgctagagtcaaacagggaaaagaccagagcaaggccaggcgctccagatct
gcatccagtcccagcccacggaggagtagcagggataaagaacaaaataaaataggtggc
tcttcaaagtttgattgggctgctcgttttagccccaaagttagtttgcctaaaacaaaa
ctttctctaccgggctcttctaagccagaggcatcaaaacctgggccttcaggattacaa
gctaaactagcaagcttgagaaaatctacaaaaaagcgcagtgaatcaccacctgctgag
ctccccagtttgaggcggagcacacggcaaaagaccacgggctcctgtgctagtaccagt
cggcgaggctctggcctgggcaaaagaggagcagctgaggctcgccgacaggagaaaatg
gctgatcctgataacaatcaggatggtgttaattcttcagctgcacgagctgatgaggct
ccacaaggagctgcagcttctagttctgttgctggggctgtgggcatgaccacctctggt
gaaagtgaatcagatgattctgagatgggaagattacaagctctgttagaagctagagga
ctccctccacatctatttggtcctcttggtcctcgaatgtctcagctattccaccgaaca
attggaagtggagctagttctaaagctcagcaacttctacaagggcttcaagccacagat
gaaagccagcagttacagtcagtgatagaaatgtgtcagttattggtcatgggtaatgaa
gaaactttaggaggttttccagtcaagagtgttgttccagctctgataactttgctacag
atggagcacaacttcgacattatgaatcatgcttgtcgagccttaacctatatgatggaa
gcacttcccagatcatctgcggttgtggtggatgcaattcctgtttttttggagaagctt
caagttattcagtgtattgatgtggcagagcaagcactgactgccttggaaatgttatca
cgcagacatagtaaagctattttgcaggcagggggcttagcagactgtttgctgtacctg
gagtttttcagcataaatgctcagaggaatgcattagctattgctgccaattgctgccaa
agcatcactcctgatgagtttcactttgttgcagattctcttccactgcttacccaaagg
ctaacccaccaggataaaaaatcagtagaaagcacttgcctttgttttgcacgtttggtg
gacaacttccaacatgaagagaatctgctgcagcaggttgcttctaaggatttgcttaca
aatattcaacaacttctagtagtgactcctccaattttgagctcagggatgttcatcatg
gtggtgcgcatgttttccctaatgtgttccaactgtcctatgctagcagttcagcttatg
aagcaaaatattgcagaaactcttcactttcttctttgtggagcctcaaatgggagttgt
caggaacaaattgatcttgttccaagaagtcctcaagaactgtatgaacttacttcactt
atctgtgaattgatgccatgcttacctaaagaaggaatttttgctgttgacactatgcta
aagaaaggaaatgcgcaaaacacagatggtgcaatatggcagtggcgagatgacaggggt
ctctggcatccctataacagaattgatagccggataattgaggcagctcatcaggttggt
gaagatgaaataagtctatctacattgggacgtgtttatacaattgactttaattctatg
cagcagatcaatgaggatactggaacagctcgtgccattcagagaaaacctaatcctcta
gccaataccagtactagcggacatccagaatcaaagaaagatgatgctcgagcacagcta
atgaaagaagatccagaactagctaaatcttttattaaaaccttatttggtgttctctat
gaagtgtatagttcttcagctggacctgctgttagacacaagtgccttagagcaattctt
agaataatttattttgctgatgctgaacttctgaaagatgtactgaaaaatcatgctgtg
tcaagtcatattgcctctatgctgtcaagtcaagatcttaagatagttgttggagccctt
cagatggcagaaatcttaatgcaaaaattacctgacattttcagtgtttacttcaggaga
gaaggtgtgatgcaccaggtgaagaatttagcagaatcagagactttactgacaagtccc
cccaaagtttgcactaatggctcaggaacacttagtgctactacaacagtaagcactgga
acagccacttctgctagcaatgctgtttcagacttaggttctccaagcttacagcacagt
agggaagactctttggacctgagtccacagggccgattaagtgatgttttgaagagaaaa
agattgccaaaacgtgggcccagaagaccaaaatattcacctcccagagatgaggacaaa
gtagacaatcaagcaaaaagccctactgctacgcaatctcccaaatcttccttcttggca
agtttgaatcctaaaacgtggggaagattaagcacacagtcaaacagcaacaacattgaa
ccagcacgtacagctggtgtgagtggcctggcaagagctgcttcaaaagatacaatatcc
aacaacagagagaaaattaagggttggattaaagagcaggctcacaaatttgtggaccgt
tattttagttcggagaatatggatggaagtaaccctgcactaaatgtgttacagagactt
tgcactgcaactgaacaactcaaccttcaggtggatggtggagttgagtgccttgtagaa
atccgtagtatagtctctgagtctgatgtctcttcatttgagatccagcacagtggtttt
atgaaacagctgctgctttacttgacgtcaaagggtgaaaaagatgctgtaagccgagat
gtcagattgaaaaggttccttcatgtatttttttcttctcctcttcctggagaagaaccc
cttggaagattggaacctctagaaaacgcacctttgttagcattggtccataaaatgaat
aattgtctcagtcaaatggagcaatttccagttaaagtccatgactttccaagtggaaat
ggaacagggagtagtttttctcttaacagaggatcacaagctttaaaatttttcaacacg
catcagttaaaatgccagctgcaaagacatccagattgtgctaatgtgaaacagtggaaa
ggaggacctgtgaagatagatcctctagcgttggtacaagccattgaaagataccttgta
gttagaggttatggcagagtgagagaagatgatgaagatagtgatgatgatggatcagat
gaggaaatagatgaatctctggctgctcagtttctaaattcaggaaacgtgaggcaccgg
cttcaattctatattggagatcatctcttgccatacaatatgacagtttatcaagcagtt
agacaatttagtttgcaagctgaagaagagagggaatctacagatgatgaaagcaatcca
ttgggaagagctggcatatggaccaaaactcataccatttggtacaagccagtacgagaa
gatgaagacagtaataaagattgtgttggtggtaagagaggaagagcacaaactgctcct
acaaaaacatctcccagaaatgcaaaaaaacatgatgaattgtggcatgatggtatatgt
ccttctgtctcaaatcctttggaagtttatctcatatcttcccctcctgaaagtataact
tttgaagatccttcattagatgttgttatacttttaagagttttacatgccatcagtcgc
tattggtattacctatatgataatgcaagctgtaaagaaattatttcaacatctgaattt
atcaacagtaagctaacagcaaaagctaacagacagcttcaagatcctttggtaataatg
acaggaaacataccaacatggctgacagagcttggaaaatcatgtccttttttctttcca
tttgacactcggcaaatgctgttctatgtaactgcgtttgatcgtgatcgagccatgcag
agactgctggacactaatccagaaatcaatcagtctgattctcaggatagcagagtagca
ccccggctggatcggaagaagcgcacagtgaatagagaggaattgttaaaacaagcagaa
tcggtgatgcaagatcttggcagttcaagagctatgttggaaatccaatatgaaaatgaa
gttggcacaggtttaggccccacactggagttttatgcacttgtatctcaggaattacaa
agagcagacttgggcctgtggagaggtgaagaagttactcttgccaatcctaaaggaagc
caagaagggaccaaatatattcataatattcaaggactctttgcacttccatttggtaga
actgctaagcctgcccatattgctaaagttaaaatgaagttccgttttctggggaaatta
atggcaaaagcaatcatggattttagactggttgaccttccacttggccttcccttttac
aaatggatgctgcgacaagaaacatctctaacatctcatgacttgttcaatattgactct
gtagtagccaaatctgtgtatcatcttgaagaaattgtgagacagaagagaagacttgaa
caagataaatcacagaccaaagaaagtctacaatatgcactggagacccttacaatgaat
ggctgttcagtagaagatctaggattggatttcacattgccagggtttccaaatatagaa
ctgaaaaaaggagggaaagacatacctgtcactattcacaatttagaagaatatctcaga
ctagttatattctgggcactaaatgaaggtgtttctagacaatttgactcattcagagat
ggatttgaatctgtttttccccttagtcatcttcagtacttctatcctgaggagctggat
cagttgctgtgtggtagcaaaacagatacttgggatgcaaagacactaatggaatgttgt
aggccagatcatggatatacacatgacagtcgtgctgtgaaattcctgtttgaaattctt
agtagttttgatagtgaacagcagagattatttcttcagtttgtgactggtagccctaga
ctgccagtaggaggctttcgaagtttgaatcctcctcttacgattgtacggaagacattt
gaatctacagaaaatccagatgacttcttaccctcagtaatgacctgtgtaaactatctc
aagttgccagactattcaagtattgagataatgcgtgaaaaacttttgatagctgcaaaa
gaagggcagcagtcattccacctttcctga
DBGET
integrated database retrieval system
