Crotalus tigris (Tiger rattlesnake): 120314406
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Entry
120314406 CDS
T08476
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120314406 (TRPC1)
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120314406 (TRPC1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
DUF2157
RIN1
Motif
Other DBs
NCBI-GeneID:
120314406
NCBI-ProteinID:
XP_039213395
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENST
GEMNINCVDVLGRNAITITIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVISVCLLQKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSL
PKPHAVGCECTLCIAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLR
ELSLVEVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTANDEHVDKRGLLEERM
NLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMAGYRRKHTFKKILTVLTVGIFWPLLS
FCYLLAPRSQIGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDY
LLILWLTGMVWSDVKRLWNNGLEDFLEESRNQLSFVMNSLYLATFTLKVVAHNKFHDFAE
RKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGKMLQDFGKFLGMFL
LVLFSFTIGLTQLYDKGFTVNEEKDCTGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVA
VFVTRFNYGEELQSFVGAVIVGTYNIVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARA
KLWLSYFDDKCTLPPPFNIIPSHKTICYIFNSLSKWISSLTSSGKVKRQNSLKEWRILKQ
KRDENYQKVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSK
YAIFYQRN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctataccagagtgcagacccatcggcctcggcttccccgaataagctgctg
gcgttgaaggacgtccggcaagtgaaggaggagactaccctggacgaaaaactgttcctg
ctggcctgcgacaaaggtgattattacatggtgaagaagcttttagaagagaatagtact
ggtgagatgaacataaattgtgtggatgtacttgggagaaatgctattaccataactatt
gaaaatgagaatctagacattctacagcttctgttggattatggctgtcagtctacagat
gcattattggtggccattgactcagaagttgtgggagctgttgatatattgcttaatcat
cgaccaaagagatccagtagaccaacaattgttatttctgtctgtttgttgcagaaatta
atggaacgtattcagaatccagaatactcaacaactatggatgtggcacctgtcatttta
gctgctcaccgtaacaactatgaaattcttacaatgctcttaaaacaggatgtgtcgcta
cccaaacctcatgctgtggggtgtgaatgtacattgtgtatagccaagaacaaaaaagat
agtctacgacactccagatttcgtcttgatatttatcgatgtttggctagtcctgcctta
ataatgttgacagaagaggatccaattctgagagcctttgaacttagtgcagacttaaga
gaattaagccttgtagaagttgaattcagaaatgattatgaagaactggcccagcaatgc
aaaacttttgctaaagatttgcttgctcaggcacggaattcccgggagcttgaagttata
ttgaatcatactgcaaatgatgaacatgtggataaacgaggattactagaagagagaatg
aatttgagtcgcctaaagcttgccattaagtataaccaaaaggaatttgtttctcaatct
aattgccagcagtttctcaatactgtctggtttggacaaatggctggttatcgccgcaag
catacatttaagaagattttgacagtcttgacagttggcatcttttggcctctactatct
ttttgctatttactggcaccaagatctcaaataggcagaataattcatactccttttatg
aaatttatcattcatggcgcttcttattttacatttctgttattgcttaatctgtattca
cttgtctacaatgaagataagaaaaacacaatgggaccagcattggagagaatagactat
cttctaatactgtggctcactggaatggtatggtcagatgttaaaagactttggaataat
ggattggaagactttttagaagaatcacgaaatcaacttagttttgtcatgaattctttg
tatttggcaacttttactctcaaagtagttgcccataataagttccatgattttgctgag
aggaaggattgggatgctttccatcctacacttgtggctgaaggactctttgcttttgct
aatgttctcagttatctccgactgttcttcatgtatacaacaagctccatcctgggtcca
cttcagatttcaatggggaagatgttgcaagattttgggaaatttcttggtatgttcctt
ttggtattgttctcattcacaattgggttgactcaactttatgataaaggatttactgtc
aatgaagagaaggactgcactgggattttttgtgagcagcaaagcaacgacacattccac
tcgtttattggcacctgctttgctctgttttggtatatattctcccttgcacatgtagct
gtatttgtcaccagatttaattatggtgaagaattgcaatcttttgtgggtgctgttatt
gttggcacatacaacatagtagttgtgattgttcttaccaaacttttagtggcgatgctt
cataaaagttttcagctaatagcaaatcatgaggataaggaatggaagtttgctcgtgcg
aagctgtggcttagctatttcgatgacaaatgcacactacctccacctttcaatattatt
ccttctcacaaaacaatctgctacatatttaacagtctcagtaaatggatttcttctctt
acatcatcgggcaaagttaagcggcagaacagtttaaaggaatggagaattttgaagcaa
aagagagatgaaaattaccaaaaggtgatgtgttgtttagtccatcgttacttgacttcc
atgagacagagaatgcaaagtactgatcaggcaacagtagaaaacctgaatgaacttaga
caagatttatccaaattccgaaatgaaatgagagacttgcttggttttcgaacatcaaaa
tatgccatattttatcaaagaaactaa
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