Crotalus tigris (Tiger rattlesnake): 120314421
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Entry
120314421 CDS
T08476
Symbol
WNT5B
Name
(RefSeq) protein Wnt-5b isoform X1
KO
K00444
wingless-type MMTV integration site family, member 5
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04150
mTOR signaling pathway
ctig04310
Wnt signaling pathway
ctig04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120314421 (WNT5B)
04150 mTOR signaling pathway
120314421 (WNT5B)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
120314421 (WNT5B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ctig00536
]
120314421 (WNT5B)
Glycosaminoglycan binding proteins [BR:
ctig00536
]
Heparan sulfate / Heparin
Morphogens
120314421 (WNT5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
wnt
DUF6973
ABG_transport
DUF6885
Motif
Other DBs
NCBI-GeneID:
120314421
NCBI-ProteinID:
XP_039213470
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MASSSGNRHETCVSIARARIASAVRRLGPGVLAPLDPGSEPRRAGPALALRPSPDPAFTS
PPPGRARPKRSPSGLGRAAALAPPPPPLAAPRQAGRAAASIPASGGPTPHHAQPRGRVCP
RSSPAAFSLLCLPAGAGERRAACRQVATLAAADLGTRLCPSSSGRQVPTRSLPAGPRRRV
RVGRGREEKEEEAGLGLVGLHHTSLRRLRNGTIRNTPSRRLDNSAPFAPSSPFRLPGRIN
SCDAAQSLEGTGSCAGRMAGRIDFLCPRGWPGVIPPDLETCFNCPQRAVTCQGSQLSLSR
TGQRRESRGKRTMPGMRLLLRLALLCGYTQLLAEASSWWSLAMNPIQRPEIYIIGAQPVC
SQLPGLSPGQRKLCQLYQEHMMYIGEGAKNAIKECQFQFRQRRWNCSTVDNTSVFGRVMS
IGSRETAFAYAVSAAGVVNAISRACREGELSTCGCSRTARPKDLPRDWLWGGCGDNVEYG
YRFAKEFVDARERERNYAKGSEEQARILMNLQNNEAGRRAVYKLADVACKCHGVSGSCSL
KTCWLQLADFRKVGDFLKEKYDSAAAMRIGRKGKLELVNNRFNSPTPEDLVYIDSSPDYC
LRNETTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKSVQVERCHCKFHWCCYVKCKK
CTEIVDQYVCK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagctccgggaacagacacgagacgtgcgtctccatcgcccgggcccggatc
gcctccgccgtgcggcgtctcgggcccggcgtccttgcgccgctcgacccgggctccgag
cctcggcgcgccggccccgcgctcgccctccggccctctcccgacccggcctttacatcg
ccgccgccagggcgggctcggccaaagagaagtccgtcgggcctcggccgcgccgccgcc
ctcgctccgcctccgcctcctctagccgcgccacgccaggcaggccgcgcagccgcctcg
atcccggcctcgggcggccccacgccgcatcatgctcagccccgcgggcgagtctgtcct
cggagctctcctgccgccttttccctcctttgtctcccagccggggcgggcgagaggagg
gcggcctgccgccaagttgcgactcttgccgccgccgatctcgggacccgcctctgcccc
tcttcctccggtcggcaggttccgactcgctcgctgcctgccgggccccggcgccgcgtt
cgagtcgggcgggggagggaggaaaaggaggaggaggctgggctgggcctggttgggctg
caccacacctccctgcgccgcctgcgcaatggtacgatccggaacactccgagccgtcgc
cttgacaacagcgcccccttcgccccctcttctccctttcggctgcccggaaggattaac
tcttgcgacgccgcgcaaagcctggaggggacgggttcctgcgcgggacgcatggcagga
aggatagattttctctgtccccgcggttggccaggggttatcccgcccgatctcgagacg
tgctttaactgtccccaacgcgctgtgacgtgtcagggatcccagctgagtctcagccga
accgggcaaaggcgcgagagccgcgggaagcgcaccatgcctgggatgcgattgctcctc
cgcctggctctcctctgcggctacacgcagctcctggccgaagccagctcttggtggtca
ctggctatgaatccaatccagagacccgagatctacatcattggagcccagccagtgtgt
agccagctaccagggctgtccccaggccagagaaagttgtgccaactataccaggaacac
atgatgtacattggtgagggggctaagaacgccatcaaagagtgtcaattccaattcagg
cagaggcgatggaactgcagcacagtggacaacacatctgtctttggcagagtcatgagc
attggtagccgagaaactgccttcgcgtatgctgtcagtgctgcaggagttgtgaacgcc
atcagccgcgcctgccgtgaaggagagctttccacttgtggctgcagccggacagcccga
cccaaggacctgccccgggactggctttggggtgggtgtggggacaatgtggaatatggc
taccggtttgccaaagagtttgtggatgccagagaaagggagaggaactatgccaaggga
tcagaagagcaggcccgtatacttatgaacctgcagaacaacgaggcagggcgcagggcg
gtgtacaagctggctgatgtggcttgcaagtgtcatggagtctcagggtcctgcagcctc
aagacatgctggctgcagctggctgacttccgcaaagtgggggactttctgaaggagaaa
tatgacagtgctgccgccatgagaatcggccgcaaaggcaagcttgagctagtgaacaac
cgcttcaattcgcccacccctgaggacctggtctacattgactccagtccggactattgc
ctgcgtaatgagaccacgggctccctgggcacacaggggcggttgtgtaataagacttca
gagggcatggatggatgcgagctgatgtgttgtggccggggctatgaccagttcaagagt
gtgcaagtagaacgttgccactgcaagtttcattggtgctgttacgttaagtgtaaaaag
tgcacagagattgtcgaccagtatgtctgtaaatga
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