Crotalus tigris (Tiger rattlesnake): 120314758
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Entry
120314758 CDS
T08476
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04510
Focal adhesion
ctig04512
ECM-receptor interaction
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120314758 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120314758 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120314758 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctig00535
]
120314758 (COL9A3)
Proteoglycans [BR:
ctig00535
]
Extracellular matrix (ECM) proteoglycans
Others
120314758 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
OGFr_N
Motif
Other DBs
NCBI-GeneID:
120314758
NCBI-ProteinID:
XP_039214117
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MAARVRAGKEKDQASEGEEEEEEEEEDGGLWEYDSTWEDEEEGKEEEEEEEGKREKKTRE
PASRAAHLEESKAGEKHSWWPTNPKWASATQSISRRNWNAARDMQKYRRHYPGLTEIEVS
EEEMWNLSFYKNEINFLPRGLYIEDLLENWQDNYGVLEENHSYIQWLFPLREQGMNFHAK
RLTCQEIERPGSRGLPGPRGPPGSPGKDGIDGEPGPPGLPGSPGPKGTRGKPGKKGDAGI
PGLPGVDGLTGLDGPLGPTGSPGDRGSVGPAGSVGPAGKGPAGPPGRSGTSGLPGGNGQK
GSPGPSGLPGFPGSPGPPGPPGLPGVFDHTRDLQCPSLCPPGLPGPPGLPGFKGHTGEKG
EFGEAGKDGEKGSRGLPGPAGPPGNIGLQGSRGLTGGVGPIGLIGDRGDIGFRGQPGMPG
PPGKVGPRGDRGHQGFRGPKGDVGPPGPNGVPGSAGPRGDPGIPGKDGSDGAHGLDGEKG
TAGHSGAPGEKGPHGLPGLPGNMGTKGEKGQAGSPGEMGESGPSGEPGVPGNQGIPGEEG
QPGPRGSPGEAGLQGPIGAAGVRGFQGRRGPSGEMGRPGATGLRGESGEQGPAGILGPKG
NQGIAGADGLPGSKGELGHFGPPGQKGEAGQRGEPGPKGSQGPNGTVGLPGIPGHAGKMG
FQGERGIPGIVGKPGPPGKEASEERIRELCDGMISEHIAQLAANLRKPLAPGLMGKPGPA
GPPGPPGSMGSIGHPGARGPPGYRGSPGHLGTPGPRGDPGEKGDKGLVGKGIDGPVGDQG
PQGAPGVPGIRKDGRNGAPGDPGLPGDPGRPGSAGAQGTPGLCDTSACMGAAARGKFKKS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgggtgagagcggggaaggagaaggatcaagccagcgaaggggaggaggag
gaggaggaagaggaagaagacggaggtctttgggagtacgattccacttgggaagatgaa
gaggagggaaaggaggaagaggaggaggaggaagggaagcgggagaagaagacccgggaa
ccggcttctcgagccgctcacctggaagaatccaaagccggagagaaacacagctggtgg
ccgaccaacccgaagtgggcctccgctacccagagcataagtaggcgtaactggaacgca
gccagagatatgcagaaatataggcggcattacccgggattaacagaaattgaggtcagt
gaggaagaaatgtggaacctgagcttttacaaaaatgagattaattttttgccccgtggt
ctctacattgaagatctccttgagaactggcaagataactacggagttttggaagaaaac
cattcatatattcagtggctgtttcctttacgtgaacaagggatgaattttcatgccaaa
cggctcacatgccaagaaattgagaggccaggatcacgaggattgcccggaccacgagga
cctccagggtcaccgggtaaggatggcattgatggagaacctggccccccaggattgcca
ggatcaccaggacccaaaggaacacgagggaaacctgggaaaaaaggagatgctggtata
ccaggccttcctggggtagatggtttaacaggtttggacggcccacttggaccaacagga
tcccccggagacagaggaagtgtaggaccagcaggatctgttggaccagcaggtaaagga
ccggcagggccaccgggacgttcaggcaccagtggtcttccaggaggaaacggtcagaaa
ggctcaccgggaccgtctggacttccagggtttcctggatcaccaggacctccgggacca
ccgggtctccctggagtgtttgaccacactagagatcttcagtgtccatcgctctgtcca
ccgggccttccgggaccaccgggactacccggattcaaggggcacactggtgagaaagga
gaatttggagaagccggcaaagatggggagaagggttcgagaggactgccaggcccagca
ggacctcctggaaatattggcctgcagggctcccgaggattaaccggaggagttgggcca
atcggtctcattggcgacaggggagacattggattcagagggcaacctggaatgccagga
cctccaggaaaagtggggccccgtggtgataggggccatcaaggtttccgagggccgaaa
ggtgatgtggggccaccaggtccaaacggagttcctgggagtgctggacctcgaggagat
cctggcatacctggaaaagacggaagtgacggagctcatggactggatggtgagaagggc
actgctggccattctggtgctcccggagagaaaggccctcacggactccctggactacct
ggaaacatgggcactaaaggagaaaaaggccaagctggcagccctggagaaatgggagaa
tctggtccttcaggagaaccaggtgtacctggaaatcaaggtatccctggtgaggaaggt
caacctggtccaagaggttctcctggagaagctggtctacaaggacccatcggagcagca
ggtgtaagaggtttccagggtcgcagaggaccaagtggggagatgggccgacctggtgcc
actgggctacggggtgaatccggcgagcagggtcctgctggcattttgggacccaaaggt
aaccagggcattgctggagcagatgggctacctggaagtaaaggagaactgggccatttt
ggacctcctgggcagaaaggagaagctggacagagaggagagcctggcccaaaaggatcc
caaggcccaaatggaactgttggactgccaggaattccaggccatgctggcaaaatgggc
tttcaaggagagcgaggaatccctgggattgtggggaaaccaggccctccgggaaaagaa
gcgagtgaagaacgcatccgagagctctgcgatggaatgatcagcgagcacattgcccag
ctagcggctaatttaaggaaacccttggctcctggactcatggggaagcctgggcccgct
ggccctccaggacctcctgggtcaatgggaagcattggacatcctggggctcgtggccca
cctggctataggggatccccaggacatttaggaactcctggtcccagaggggaccctggt
gagaaaggagacaaagggctcgttggcaaaggcattgatgggcctgttggagatcaagga
ccacaaggagcaccaggtgttcctggaattagaaaagatggtcggaatggtgcacccggt
gatcctgggttaccaggggatcctggaagacccggttcagctggagcacaaggaactcca
ggactctgcgatacatctgcctgtatgggagctgctgctagagggaaattcaagaaatcg
taa
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