Crotalus tigris (Tiger rattlesnake): 120314804
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Entry
120314804 CDS
T08476
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120314804 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120314804 (ARID1B)
03021 Transcription machinery [BR:
ctig03021
]
120314804 (ARID1B)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120314804 (ARID1B)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Helix-turn-helix
ARID
120314804 (ARID1B)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120314804 (ARID1B)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120314804 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
120314804
NCBI-ProteinID:
XP_039214206
LinkDB
All DBs
Position
Unknown
AA seq
2447 aa
AA seq
DB search
MAAQVAAAPISASKSKVKIQSLTGNLNQDLNSGVPVAGTVGAAGSGSLLGVVDGTSSRLN
NVDYHLLHQDNEVNMASNATSAAAAAPNNATSSGRSSSSELVLKDPGSASGLSSSSFPMA
TGLLPNHKLQSVGGDSSTAAPSHHPRAQHQHPAHLRAQHPHVRHYHHHHHHHHHVLQHQQ
LNQFQPQPPPQHHPMQNNNNGGGGGGGSSSNNNGGGAAQPSSTDMEQQQQQQQHGGKDRG
LGVQAEPQNQPQPQPLLNQGGDEEEATPPPDKMGEQHLNSRYDHPSLGPLGGQPPPPPPP
LPPPPPPQGAGGGGTGGGDGRGGGPSAVGVSEFNSYYGNAGSGSSGGGASSASRAGPCFD
QHGGQQSPGMGLMHPAAAPNIMDPLPNSHEGYANSQYNHYSGAYGRPGGGTNVTAGTVAA
AAGGGGGGGGVVYGGSSSAFGVLSSPRQHQQGMMLGPGGGGSLGKISGAAGFQRFSGQNQ
HPSGATPTLNQLLTSPSPMMRSYGTGYPEYSSPSVAPSQQPAQGAAAAAAPGSQQAVMGK
DMGSQYGAANPAWAVAQQRNHPAMSPGSTGQTLSRNQGNPMDPMVMKRPQLFAVGNNPHA
QSQPGSPFPGQSYGPPGPQRFPMGMQSRTPASMGGMQYPQQQMPSQYGPQGVTGYCQQPY
YNQQPQPQHLPPQAQYLSQAQQRYQTQQEMSQEGYGTRSQPPVTQNKPNHEELTLIQQER
PSSLPVEVLASEDASFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSPF
SPHASPHLSSIPGGPSPSPVGSPAGSNQSRSGPISPASIPGSQMPSQTPGTQSESSSHPA
LSQSPMPQDRGFMTGIQRNPQLSQYASQQTGPSMSPHPSPGGQMHSGIGTFPQSNSSGTY
GTQMSQYGPQGSYSRQPTYSGVTNASYSGPGPGMGINISNQMHGQGPGQPCGTIPLGRMP
STGMQSRPFPGNMSSMTPSSPGMTQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSR
PPYIRSPAYPSQSGAGGRPMFSSQHPNYGNAQSPMMHQPDQYGQGSFPVINQSGIMGSSS
PYTQSMNSNSSLMNPQVPPYSLAPNMVNSSTAPMGLADLMTQGESKLPVPLKPDGKEEGP
SQTESKKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSIGSPGWPKTPSSP
KSSSSNTTGEKITKMYELGTEPERKVWVDRYLNFMEERGTPVAGLPAVGKKPLDLFRLYV
CVKEIGGLAQVNKNKKWRELSTSLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPE
VFSTGDTKKQAKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPSDLKPPTPASTPHGQMTP
TQSSRNSSVSVHDPFSDISDSTYPKRNSMTPNAPYQQSMNMPDMMGRMPYEPNKDPFGGM
RKVPGNSETFMAPGQMPNSGMQDMYSQSPAGTMSNMGIGQRQQFPYGSGYDRRSDHGLGP
EGSMGAPGQSNMVPSNSDPSMYSPNCYPGQQRHEPYGPQYPMQAPPSGQPPYGGHQSGMF
PQQQNYKRHMDGIYGPPAKRHDGDMFNMQYSNQQQELFNQYSSAYSGPDRRPIQGQYPYP
YNRERMQGPGQMQQHGIPPQMIAGPMQSSASSESPQQNIWPTRNDMSYPYQNRQGPGVPA
QAPPYPGMNRTDDIMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPP
SMPNHISRAPSPASFPRSHENRMSPSKSPFLSSMKMPKVLPTLPVSQVTGPPTQPPPSLR
REVTFPPGSVEASQPVLKPRRKITSKDIVSPEAWRVMMSLKSGLLAESTWALDTINILLY
DDSTVATFNLSQLPGFLELLVEYFRKCLIDIFGILMEYEVGHPGSKLQDHNSSLNEDVHS
ATEDVRKEEENDECIDYFYDLEDEEEEEEEEENENTEEVKSTLVAPPGAILDPSERPKQA
SKFDKLPIKIVKKNNLFVVDRSDRLGHVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIP
PCRRPSLSVSSGKKKNVEGKGESEEQQDKSISATIDDVLSARPGALSEDPDANSQTDSSK
FPFGIHQVKSHRNIKLLEDEPQSRDETPLCTIIHWQDSLAKRCICVSNIVRSLSFVPGND
VEMSKHPGLVLILGKLILLHHEHPERKRTPQTYEKEEEVDKGVACSKDEWWWDCLEVLRD
NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSILSPQRLV
LETLCKLSIQDNNVDLILATPPFSRQEKMYATLVRYVGDRKNPVCREMSMALLSNLARGD
TLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHVQPPPLEPPSVDMMCRAAKAL
LAMARVEENRSEFLLHEGRLLDISISAVLNSMVASVICDVLFQIGQL
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaagtagcagcggctccgataagtgcgagcaagagcaaggtcaaaatccag
agtttgacgggtaacttaaaccaggatcttaactctggggttcccgtggctggcaccgtc
ggagctgctggatctggctccctcctgggggtcgtagatgggacgagcagcagattgaat
aatgtagattaccatcttctccaccaagataatgaagtgaacatggccagtaatgcaact
tctgccgccgccgcggctcctaacaacgcgaccagcagcggccgcagctcttcctcggaa
ctggttctgaaagaccctggaagcgcgtcgggcttatcttcctcttcttttcctatggcg
acagggctgcttcccaatcataagttgcaaagcgttggaggcgattcctctaccgccgca
ccttcacaccacccccgtgcccagcaccagcacccagctcacctccgtgcccagcacccc
cacgttcgccactaccaccaccaccaccaccaccaccaccatgtacttcaacaccaacag
ctaaatcaattccagccacagccgccgcctcagcaccatccgatgcagaataacaacaac
ggcggcggcggcggcggcggcagcagcagcaacaacaacggcggcggcgctgctcagccc
agcagcacagacatggaacagcagcagcagcagcagcaacatggaggaaaagaccgtggc
ttgggggttcaggccgagccccagaaccagccgcagcctcagcccctgctgaatcaaggc
ggggacgaggaagaggcgacgccgccgccggacaaaatgggcgagcagcacctcaacagt
cgctacgaccaccctagtttgggacctttgggcgggcagccgccgccgccgcctccaccg
ctaccaccaccgccaccacctcagggagcgggcggcggcggcactggaggaggagacggc
cgcggcggcggcccctcagcggtgggtgtctcggagtttaatagctattacggcaacgct
ggcagcggcagcagcggcggcggcgcctcctcagcgagccgggccgggccttgctttgat
caacatggcggacaacaaagccccgggatggggctaatgcaccccgcggcggcccccaac
atcatggaccccctgcccaactcgcacgaaggctacgccaacagccagtacaaccactac
tcgggcgcttacggccggcctggcggcggcactaacgtaacagcaggaaccgtggcggcg
gctgcaggaggaggaggaggaggtggcggcgttgtctatgggggctcgtcctctgctttc
ggggtgctgagttcccccaggcagcaccagcagggcatgatgctgggccctggcggcggc
gggagcctggggaagatatctggggctgcgggcttccaaagattctccgggcaaaaccaa
cacccgtctggagccaccccaaccttgaaccagctgctgacttcccccagccccatgatg
aggagctatggcacaggctaccccgaatatagtagccccagcgttgccccatcgcagcag
ccggctcagggagcagccgccgcagccgccccaggaagtcagcaggcagtcatgggcaag
gatatgggctcccagtatggagctgcaaacccagcctgggcagttgcacaacaaagaaat
caccctgctatgagccctggaagcactggacagaccctcagcaggaaccagggcaaccca
atggatccaatggtaatgaaaagacctcagttgtttgcagttggcaacaacccccatgcc
cagtcccagcccggcagtccatttccagggcagtcatacggaccaccaggaccccagcgt
ttcccaatgggaatgcagagccgaactcctgcgtccatgggaggaatgcaatatccacag
caacagatgccatctcagtatggtccacaaggtgtaactggttactgccaacagccatat
tacaaccagcaaccacaacctcagcatctgcctcctcaggcccagtacctctcccaggcc
cagcaaaggtaccagacgcagcaggaaatgtctcaggaaggctacggaaccaggtctcaa
ccccctgtcacccagaacaaacctaaccatgaagaactaaccctaatccaacaagagagg
ccttcaagtttaccagttgaagtcttagcctcggaggatgcttcatttggactcaaggat
ttatcaggctccattgatgacctgcctactggaactgaagcaacattgagttcagctgtt
agcgcatcaggttctactagcagtcaaggggagcagagcaacccagcacagtcacctttc
tcccctcatgcctctccgcatctgtccagcatccctgggggcccatccccttcccctgtg
ggctctccagctggaagcaatcagtcaaggtctggtcccatttctcctgcaagtattcca
ggtagccagatgccatcacagactcctggtacccaatcagaatctagctcccatcctgcc
ttgagccaatctccaatgccacaggatcgaggttttatgacaggcattcaaagaaaccct
cagttgtcacaatatgcatctcagcagactggaccttctatgtcacctcatccttcacct
ggaggtcaaatgcattctggaatcgggacctttccacaaagtaattcaagtggtacttat
ggaactcagatgagccagtatggaccacaaggaagctactccaggcagccaacatattct
ggagtgaccaacgcaagttacagtggcccaggacctggtatgggtataaacatcagcaac
caaatgcatggacagggtccaggccagccttgtggtaccattcccttgggacgaatgcca
tcaactgggatgcagagcagaccgtttcctggaaatatgagcagtatgacacccagttct
ccaggcatgactcagcaaggaggccccgggatgggaccacccatgccaactgtgaatcgt
aaggcccaggaggcagctgcagcagtgatgcaagctgctgccaactcggcccagagcagg
ccaccatacattcggtcgcctgcttatcccagccagtctggggctggcggacgccccatg
ttttcttcacagcatcccaactatggcaacgctcagtctcccatgatgcatcagcctgac
cagtacgggcaaggcagttttcctgtcatcaatcagagtggcattatgggatccagctct
ccttacacccaatcaatgaacagcaactcaagcctgatgaaccctcaagtacctccttac
agcctggcacctaacatggtgaacagttccacagcacctatgggtcttgcagacttgatg
actcaaggcgagtccaaattgcctgttcctctcaaaccggatggaaaagaagaaggacct
tcccagactgagagcaaaaaggatagctacagctctcagggtatttctcagcccccaacc
ccaggcaacctgccagtcccttccccaatgtccccaagttctgctagcatctcctcattt
catggagatgaaagtgatagcattggcagcccaggctggccaaagactccatcaagccct
aaatcaagttcctccaacacaactggggagaagatcaccaaaatgtatgagctgggaact
gagccagagcggaaagtttgggtggatcgctatctcaacttcatggaagaaaggggaaca
cctgtagctggtctccctgctgttggcaagaaaccactggatctttttagactctatgtt
tgtgtaaaggagattggaggcttagcccaggttaataaaaataagaagtggcgtgaactg
tctaccagcttaaacgttggcacttcgagcagtgcagccagctccttgaaaaaacaatat
attcaatacctctttgcctttgaatgcaagattgaacgaggggaggaaccccctccagaa
gtcttcagcaccggagatactaagaaacaagctaagattcagccgccatctcctgctaac
tcgggttctcttcagggtccacagaccccccagtctacggggagcaattctatgacagaa
gtgccaagtgacctcaagcctccaacaccagcatctacgcctcacggacagatgacacct
acacagagcagcagaaatagttcagtcagtgtacatgatcccttttcggatataagtgat
tccacatacccaaagcggaactccatgactccaaatgcaccctatcagcaatcaatgaat
atgccagatatgatgggaaggatgccgtatgagccaaacaaggatccttttggtgggatg
agaaaagtgcctggaaatagtgaaaccttcatggcccctggacaaatgcccaacagtggt
atgcaggatatgtacagccagagtcctgctggaactatgtccaatatgggcatcggccaa
cgccaacagtttccctatggaagtggttatgatcggaggtcggatcatgggctgggtcct
gaaggcagtatgggagcacctggtcaaagcaacatggtgccttcaaacagtgacccaagc
atgtactctcctaactgttatcctgggcaacaaaggcatgaaccatatggaccgcagtat
ccaatgcaagctcctccttctggacagcccccctatggaggacaccaatcaggaatgttt
ccacagcagcagaattacaaacgccatatggatggtatatatggacctccagcaaaacgt
catgatggagatatgtttaacatgcaatacagcaatcaacagcaggagttgtttaaccag
tacagcagtgcttactctggaccagataggagacccatccagggacaatatccatatcct
tataacagagagaggatgcaaggtcctggacaaatgcaacaacatggaatacctccacag
atgattgctggccctatgcagtcatcagcttccagtgaaagccctcaacaaaatatatgg
cccacaagaaatgatatgtcttatccatatcagaacaggcaaggccccggggtccctgca
caggccccaccttatccagggatgaatcgtactgatgatataatggtacctgaccagaga
ataaaccatgaaagtcagtggccttctcatgtcaaccagcgacagccttcttacatgtca
tcttctgcttccatgcagcctattactcgacctcctcagtcttcctatcagacaccacca
tcaatgccaaaccacatatctcgagctcctagccctgcatctttcccacgttctcatgaa
aatcgtatgtctcccagcaaatctcctttcctatcctctatgaagatgcctaaagttttg
cccactcttccagtctcgcaggtcacaggtcctccaacacagccaccaccctctcttagg
cgggaagtcacttttcctccaggttcggtagaagcatcccagccagttttaaaaccaagg
cgaaagattacctcaaaagatattgtgagtccggaagcctggcgagtgatgatgtctctt
aaatcaggccttcttgcagaaagtacttgggcattagacactattaacattcttctgtac
gatgacagtacagtggctactttcaatctctcgcagttacctggttttcttgagctgttg
gtggaatattttagaaaatgcctgattgatatttttgggatccttatggaatatgaagtg
ggacatccaggatcaaaactgcaagatcataattcatctctgaatgaggacgtgcactct
gcaacagaggatgtcaggaaagaggaagaaaacgatgaatgtatcgattacttttatgac
ctggaagatgaggaggaagaagaggaagaagaggaaaatgagaatacagaagaagtaaag
agcactcttgttgctccacctggtgccattcttgatccaagcgagaggccaaaacaagcc
agtaagtttgacaagttgccaataaaaattgtaaagaaaaacaacttatttgttgttgac
cgatctgataggctgggccatgttcaggaattcaacagtggacttcttcattggcaactt
ggcgggggtgatacaaccgaacacattcagacccactttgagagtaagatggagattcct
ccttgcaggcggccatctctatcagtctcctcaggtaaaaagaagaatgtagagggcaaa
ggagaatctgaggaacaacaagacaaaagcatatcagccactattgatgatgtcttgtca
gctcgtccgggagcattgtctgaagaccccgacgctaactctcagacagatagtagtaaa
tttccatttgggatccatcaagtgaaaagtcatcgaaatatcaaactgctggaagatgag
ccacaaagtcgagatgaaactcctctatgcaccattatccactggcaagattctttggcc
aagcgttgcatctgtgtgtcaaatattgttcgcagcttatcttttgtgcctggcaatgat
gtggaaatgtccaaacatccaggcttggtgttaatcttgggaaagttgattcttctccat
catgagcacccagaaagaaagcgtacaccacagacgtatgaaaaagaggaagaagtggac
aaaggggtggcctgcagcaaggatgaatggtggtgggactgccttgaggttttgagggat
aatacattggtcacactagccaacatttctgggcagctagacttatctgcttatacagaa
agcatctgtttgccaattttggatggcttactgcactggatggtgtgcccctcagcagag
gcacaagatccttttccaactgtggggcccaactcaatcctttcgcctcagagacttgta
ctggaaaccctgtgtaaactcagtatccaagacaataatgtggaccttatattggccaca
cccccattcagtcgtcaggagaaaatgtatgctactttggttaggtacgttggggaccgc
aaaaatcctgtctgccgagaaatgtcaatggcgctcttatcaaacctcgcccgaggggac
acgttagcagcaagggcaatagctgtgcagaagggaagcattggaaacttgataagcttc
ctggaggacggggtcaccatggcccagtatcagcagagccagcataaccttatgcacgtg
cagcctccacctctggagccacctagcgtggacatgatgtgcagggcagccaaggccttg
ttggccatggctcgggtggaggaaaaccgctccgaattccttttacatgagggccgcttg
ctggatatctcgatatcagctgtcctgaactctatggttgcatctgtcatctgtgatgta
ctctttcagatagggcagttatga
DBGET
integrated database retrieval system
