Crotalus tigris (Tiger rattlesnake): 120314898
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Entry
120314898 CDS
T08476
Symbol
ATG2A
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 2 homolog A
KO
K17906
autophagy-related protein 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04136
Autophagy - other
ctig04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120314898 (ATG2A)
04136 Autophagy - other
120314898 (ATG2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120314898 (ATG2A)
03029 Mitochondrial biogenesis [BR:
ctig03029
]
120314898 (ATG2A)
Membrane trafficking [BR:
ctig04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120314898 (ATG2A)
Mitochondrial biogenesis [BR:
ctig03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120314898 (ATG2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
120314898
NCBI-ProteinID:
XP_039214384
LinkDB
All DBs
Position
Unknown
AA seq
1981 aa
AA seq
DB search
MSRWFFPWSSSIKKRACRYLLQHYLGHFLEERLGLEQLSLDLYAGAGRLTRLHLDVWSVN
EFLQSVGAPLEVLDGFIDSIAVTIPWSALVTENCTVEVSGLQITCRPKYRQGPAGPEGQS
WASSMTTSMQLAQECLKEQTEEPSDPTQPLEGLEMFAQTIETVLRRIEVTFVDTVIRVEH
TPRSGEAPSVALEIHIKRLEYCDEVVRDPGQALTVDIHQLPPFVQKILQLSNVLLYYEEF
GEGSARGPKETEPCDSGGEEARPSPLTQIGSCSGHTEMRIKLKQNEAFPGAKLELDGKIG
SLHLLLAPQQIVHLADLLSSLNLSESGILQEQMSKNRPLDAEDLKLIEQDLSQQLHSGLA
SAPAHLEGMAAGVENGEMFFSMAPMTSSVTSLRSVSDLSDLDSSVHSDISTTPLQPPTFV
PGLMLGSPRRYRRLPFASTLPGLNTVPGKAGPLPPLSLDSQRPEMLLRVTVGGLTLTLLH
QPPGLFPSDVLSLGLAQRFFSQLGGLKDTAFGGRDFHPLRHCFEEAMPRSHVRLTGAAVQ
LTCERRASKQLCRLNWDASFGLLEILECLWPASRGTGKPEYTQLLVFPSLGPVPYSQAPQ
PCARIRSKHLEKLPSSKRGLTRGASSKLTVELMVELANFLCEVDLGTLDRLCSLLHPAMV
PPRPGGYPPEEPVPGFPPAAQWQANVQLVAPKGSLLLPFPVPDLRVWAERRAWAEKAVRR
ERLRLDLAGVELHTDLEPTGPVQLEVTLTDLHGIYEDGGTLSVPCFRVGKAPDLLARGIG
KKYLLPKLILTFCPTPTDAPWDLALAATEEVELSTVESPCELKQPEPSPFSSKRTMYETE
EMVIPGDREEMAEFQSQTLAASHYTLELTFPTVHIYLPSKKFYESIYNRINNDLLMWEPF
SPPPSPTDPPGGAGSASPFASDGLPPAHWENFQMCKSAFKLDSDSEDDDSHFYSADQMGA
QQKRGEQRNPFPLSCISVVLRVGQGRITALCNAKDEGGNKLEAAHGELVLDVENGSLFSV
SHYKGCEDIGYFCIEAEKVALYHKAVVEDYLTAEHLEIPNFLPPEGLHPTIYASQEGSIN
WPLGAKKDVVKMLSVAIKINLDLEKNIKEFLVTLRLEGATIRHRMALAHQSWYSQLIDFL
DVLDDPILGFVPPAIITVLHTHLFNCAMDYRPLYLPLRVLIMAETFTLSSNIIVDTSVFL
LRFILDNSTLFLSNKCEAETGDLNKDYVCVVEMDLLELVITTWKGDITGKLTRPLFELRC
SNNVVHIHTCADSCAALANLIQYVVNNGDLHPPPQHDSPTESAGQKVQLPESPASLPTCP
PAETAAINQRDLTDALMDTERGYLEMTGDSGMRRQPSPVSVYLFPGEKGVAGQGKAPLPP
VIPVGEGLDFTPSEDSEGESEATDGFCILDAPGTGIPPRDGEPVVTKLLDGPVHIQEGHF
SRPLGSTDLLKAPSHFPMPESRVVMREISVVWHLYGGRDFGPGRSASGHMHSPRTKSTLP
GTRSSPSRSSVPGRPQSSGRAQGGPGRIHDLLMEIQLTKVSFQHESYSGDSSEKLSAESE
EQPLARQVFIVQELEIRDRLASSQINKFLYLYSSELLPRRAHSNMLTIKALHVCPEAGGG
GPECCLRVSLMPLRLNIDQDALFFLKDFFTSVVASINPVVPIEAGSEGPAESPGKDSAER
MMATSVETTTSENSSSASSSSEQPIYFREFRFTSEXPIWLDYHGXHVTVDQVGTFAGILI
GLAQLNCSELKLKRLCCRHGLLGVEKVVHYALTEWLTDIRKNQLPGILGGVGPMHSFVQL
FHGLRDLFWLPIEQYRKDGRIIRGLQRGAASFGTSTASAALELSNRLVQAIQATAETVYD
ILSPTAPPSRALPDRKYARKLRRSHQPADLREGVAKAYDTVREGVIDTAQAICDVAARGH
EQKGITGAVGGVLRQIPPTVVKPLIVASEATSNLLGGMRNQIKPDALKEESLKWRLEESQ
D
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggtggttcttcccgtggtcgagctcgatcaagaagcgagcctgccgctacttg
ctgcagcattacctgggccacttcctggaggagcggctcggcctggagcagctcagcctc
gacctgtacgcgggcgccggacgcctgacccgtctccacctcgacgtctggtccgtgaat
gagttcctgcagtccgtgggcgccccgttggaggtcctggatggcttcatcgacagcatt
gccgtcaccatcccctggtctgccttggtcaccgagaactgcactgtggaagtcagcggg
ctgcagatcacctgtcggcccaaatatcgccaaggtcctgcaggcccagagggccaaagc
tgggcttccagcatgaccaccagcatgcagttggctcaggagtgcttgaaggagcagacg
gaggagccttcggaccccacccagcccctggagggcttggagatgtttgcccaaaccatt
gaaacagttctgagaaggatcgaagtgacctttgtggacacggtgatacgtgtggagcac
acgcccagaagcggagaggcacccagtgtggccctggaaattcacatcaaaaggttggag
tactgcgatgaggtagtgcgggaccccgggcaggcgctcactgtggacatccatcagctt
ccaccctttgtgcaaaagattcttcagctgagcaacgtcttgctttactatgaggaattt
ggtgagggcagtgcccggggcccgaaggagactgagccatgcgattccggtggggaagaa
gccagacccagccccctgactcagatcggaagctgctctggacacaccgagatgaggatt
aagctcaagcagaacgaggccttccctggagccaagctggagttagatgggaagattgga
tctctgcacctgctgctggctcctcaacagatcgtgcacctggcggaccttctctcatcc
ctgaacctgtctgaatccggcattctgcaggaacagatgagcaaaaaccgccctctggat
gcggaagatctgaagctgattgagcaagacctcagccagcagctgcattcagggttggca
tcggcgcctgcacatctggagggaatggctgctggagtggagaacggagagatgttcttc
tccatggcacccatgacgagcagtgtaacgtctctgcgctcagtcagcgacctctcggat
ctggattcgtcggtccacagtgacattagcaccactcccttgcagcccccaacttttgtc
ccagggctgatgctaggaagcccccggcgttatagacgactgccttttgcctcaaccttg
ccaggtctcaatacggtaccaggcaaggcaggccccctgccgcccctctccttggacagc
cagcgtcccgagatgctgctgcgggtgaccgtcggggggctgaccttgaccctgctccat
cagccacctggacttttcccatcggatgtcctctcgctcggattagctcagcgtttcttc
tcccagctggggggtctgaaggacaccgccttcgggggccgggatttccatcccctgcgc
cactgctttgaggaggccatgccacgcagccatgtcaggctgaccggggctgcggttcaa
ctcacctgcgaacgcagggcttctaagcagctgtgtaggctcaactgggatgcctccttc
ggtcttctggagattttggagtgcctgtggcccgccagcagagggacaggaaaacccgaa
tatactcagctgctggtctttcccagcctgggccccgttccttacagccaggcgcctcag
ccctgcgcacggatccggtccaagcacttggagaagctgccgtcctccaagaggggccta
accagaggagcctcgtccaagctcacggtggaactgatggtggagctggctaatttcctc
tgtgaagtggacctgggtacgctggaccgcctctgctccctgttgcaccccgccatggtg
ccaccccggccaggtggctaccctcccgaggaacccgtgccaggtttccccccggctgcc
caatggcaggccaacgtccagctggtggcccccaaaggttccctccttctcccgttccct
gtcccggacctccgggtctgggcggagaggcgcgcctgggccgagaaggcggtgcgcagg
gagcgcttgcggctggacctggccggtgttgagctgcacacggatctggaaccgacgggt
cccgttcagttagaggtcacgctgaccgacttgcacggcatttatgaagatggtgggacg
ctgtcagtgccttgttttcgggtgggcaaagcccctgacttactggccagaggcataggg
aagaagtatctcctccctaagctcatcttgaccttctgcccaacgcctacggatgcccct
tgggatttggcactggcagccaccgaagaggtggagctgtcaacagttgaaagcccctgt
gagctgaagcagcctgagccttcacccttctcctccaagaggacgatgtatgagacggag
gagatggtcatccccggagaccgcgaggagatggccgagttccagagccagacgctggcc
gcctcccactacactctagagctgaccttccctactgttcacatctacttgccgagcaag
aagttctacgaaagcatatacaacaggatcaataatgacctcctgatgtgggagcccttc
agcccgcccccgagccccacggatcctccaggaggggctggatcagcctccccctttgcc
tctgatgggctcccacccgcccactgggagaacttccagatgtgcaagtcagcctttaag
ctggattcggactccgaggacgacgattcccacttctactcggcggaccagatgggtgcg
cagcagaaaagaggggagcagaggaaccccttcccgctcagctgcatctcggtcgtgctc
cgggtgggccagggacgcattacggcgctctgcaatgccaaagacgaaggaggcaacaag
ctggaagccgctcacggggaactcgtcctggatgtggagaatggaagcctcttcagtgtt
tctcactacaaaggctgtgaggacattggctacttctgcatcgaagccgagaaggtggca
ctttatcacaaagctgttgtggaggactaccttacagctgagcacctggagattcccaat
ttcctgccccccgaagggctacaccccaccatctacgcctcccaagagggctccatcaac
tggcctctgggggccaagaaggatgttgtcaagatgttgtctgtggccatcaagatcaac
ctggatttggagaagaacataaaggagttcctggtgacgctgcgccttgagggcgccacc
atacggcaccgcatggcgctggcccaccagagctggtactcgcagttgatcgacttcctg
gatgtcctggacgaccccatcctgggcttcgtgccccccgccatcatcaccgttttgcac
acccacctcttcaactgtgccatggattacaggcctctctatttacccctccgggttctc
atcatggcagagaccttcaccctttccagcaacatcattgtggacacctcggtcttcctc
ctccggttcattttggataactccactctgttcctctccaacaaatgtgaagcagagact
ggtgacctgaataaagattatgtttgcgtggtggaaatggatctcctggaactggtcatc
accacgtggaaaggagacataactggcaaactgacccggcccctctttgagttacgctgc
tccaacaacgtggtccacatccacacgtgcgctgactcttgtgcagcccttgccaacctc
atccagtacgtggtcaacaacggggacctgcacccgccacctcagcacgacagccccact
gagagtgcggggcagaaggtgcagttgcccgagagcccagcttctctgcccacctgtccc
ccggctgagacggcggccatcaaccagcgggacctcacagacgccctaatggataccgaa
cgtggatacctagagatgaccggggactccgggatgaggcggcagccttcaccagtctcg
gtgtatctcttccccggtgagaaaggagtggcaggccagggcaaagcccccctgccccca
gtgatcccggtgggtgaggggcttgacttcaccccttcggaggacagtgaaggcgagagc
gaagccacggatggtttctgcattttggatgcgccaggaacgggcattccgccgcgggat
ggggaaccggtggtgacaaagctcttggacggcccggttcacatccaggagggccacttc
tctcggcccctgggcagcacggatttattgaaggccccctcgcacttcccgatgccggag
agccgagtcgtgatgcgggaaatttcagtggtctggcatctctatgggggcagagatttt
gggccagggcgctcggcctctggccacatgcattcacccaggacgaaatcaacccttccc
ggcacccgttcctccccctctcggtcttccgtgcccggccgaccgcagagctccgggcgg
gcgcaaggaggccctggccgtatccatgacctgctgatggagatccagcttacaaaggtg
agcttccagcacgaatcctactcgggggattcatccgagaagctgtccgcggaatcggag
gagcagccattagccaggcaggtgttcattgtccaggagctggagatccgagaccgactg
gcctcctcgcagatcaacaagttcctctacctgtacagcagcgaactcctgccccgacgt
gcccattctaacatgcttaccatcaaagcgcttcacgtctgccctgaagctggtgggggg
ggtcccgagtgctgcttgagggtctccctgatgcctctccgactcaacatagaccaggac
gccttgtttttcctcaaagactttttcaccagcgtagtggccagcatcaatcctgtcgtg
cccattgaggctggatctgaaggtcctgctgaatcccccgggaaggactcagccgagagg
atgatggcgacttcggtggagaccacgaccagcgaaaacagctccagtgcctcctcttct
tccgagcagcccatttatttccgagagttccggttcacctccgagngtcccatttggctg
gattaccacgganaacacgtcaccgtggaccaggtgggcacctttgccggcatcctgatc
ggattggctcaactcaactgctccgagctgaaactgaagagactctgctgtcgccacggg
ctgctgggggtggagaaggtggtccactacgccctgaccgagtggctgaccgacattcgc
aaaaaccagctgccgggcatcctgggcggggtgggacccatgcactccttcgtgcagttg
ttccacggcctgcgggacctcttctggctgcccatcgagcagtaccgcaaggacgggcgc
atcatccgtggtctgcaacgtggcgccgcctcctttggcacctccaccgcctcggcggcc
ctggaactcagcaaccgcctagtgcaggctattcaggccaccgccgagaccgtctacgac
atcctgtcccccacggctcccccgtcacgcgctctaccagataggaagtacgcccgcaaa
ctacgacggagccatcagccggcagatctacgtgaaggggtggccaaggcctacgacacc
gtgcgcgagggcgtcatagacacggcccaggccatctgcgatgtggctgcccgtgggcac
gagcagaagggcatcacgggggccgtgggcggcgtcctgcggcagatccctcccaccgtg
gtcaagccgctgatcgtggcgtccgaggccacctccaacctcctgggcgggatgcgcaac
cagatcaaacccgatgcgctgaaagaagaatccctcaagtggcgcttggaagagagccag
gattag
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integrated database retrieval system
