Crotalus tigris (Tiger rattlesnake): 120315056
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Entry
120315056 CDS
T08476
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120315056 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120315056 (NUP98)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120315056 (NUP98)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120315056 (NUP98)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120315056 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
120315056
NCBI-ProteinID:
XP_039214662
LinkDB
All DBs
Position
Unknown
AA seq
1794 aa
AA seq
DB search
MFNKSFGTPFGSNAGGFGTTSTFGQNTGFGTTSGGAFGASAFGANNNAGGLFGSTQTKPG
GLFGASTFSQPATSSTNTGFGFGPSTGTSSGLFGTTSTGGGLFSTQTNAFAQNKPAGFGN
FGTSTSSGGLFGTTNTASNPFGGTSGSLFGSTSFSTVPTGTTIKFNAPTGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGATPGLFGSSTATSSTAT
GLFGSSTTNTGFSYGANKTAFGASTTGFGTGTGSLFGSTQPTPTLFNKPFGQPTTAQNTG
FSFTNTSTLGQPNTNTMGLFGAAQPTQTGGLFGTAASTNTAAAFGTGTGIFGQPNAGFGV
GGSSLFSNKPAGFGTTTTSAPSFGTTTTGLFGFNANTTGNSLFGNKPATGTLGPALGAGF
GTALNAGQNSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAAQ
QAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTSGSSKSHLFDGLDDDEPSLTNGAFMPKKSIKKLVLKNLNSTSLFSPGSAE
VDDIASPSIYPENGDQSVNENHQPDEEQEEESYCPEMSRFLANSIAKPLPQTPENAPHKH
HSNSVDDTLVALNVRPGLRNGLENSTEEASYHEDSLQEERDKESEDHFLPAHPAGIVLTR
VGYYTIPSLEELAKMTDDQGECFVTDFTIGRKGYGSIYFEGEVNLTSLNLDEIVHIRRKE
VIVYPDDELKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLEAVSRK
QGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEDEDNLAKVEAKKLKTAPLPLPGQPMSH
QMAAPGKLAPPPKSPEADHLGKVVEFDSDMADVTQELLQDAMAEENLAEEQEPVPASTHI
ASSLDINPHTLQIMKASLLADEEELDWMAERQFGKQAAEKEPSQKICSPRLPISSSRGWK
GRPTGSRLLQSRLSTGSFLLPNASLQDGHSPRTSSLGGALPAPPWPALSPLASAFLVPRS
APEVPLKTVGVRRQAGLVPLKKSVAYGKGRLLKDMALFMGRSFRVGWGPNWILVHSGDRL
GPLSQPEDHGEPAEYGFLPAPMAPKPVSESPFKVHLEKLTLEGKSADLGVYLLPLEIKLK
HSTVHLDDPCPLLAPNPGVAAIHDYAAWASEACEDAEEQEGGVARAWALVWRLCEALWGH
LQELEVRLEEPSDYELLLGRRRAFSRWLSRAAAERIQEEVSLSQNDNPAEAVFSYLTGKQ
IGQACRLAQQSGDLRLSLLLSQLAGSQEVRELLALQLADWHQLQADVFIRDERLRIFCLL
AGKPVWQLSEKRTINVCSQLDWKRSLGIHLWFLLPSTAPLSKALSMYEAAFQDSPDGERY
ACTPLPPYLEDSGCVVEDDNSQRPLRDVCFHLLKLYSDRCYDLHQLLDPRSITADPLDHR
LSWHLWEALRALNYTHLSEQCQGVLNASYAAQLEREGLWEWAVFVLLHTHNAQMRERAVR
ELLSRHCKLLELPESRNKEAFLTEKLCVPPAWIYEAKALWARREGDRPREALYLFKAGHW
NQCHQLVVRHLASDAIINENYTYLKGFLEDLSSPERCSLIQGWDTAGLVFLDYLQVIEMV
NRIQQLDCTRYELEELHSKVISLCSRIELVQCHSAKDRLAQSEMAKRNADILRVVLSLQH
PPDSASGATPDVQRVPLRLLAPHIGRLPMPEDYALEELRGLTQSYLRELMVVAQ
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcgtttggaacgccttttggcagcaatgcgggaggatttggaaccact
tcgaccttcggacagaatactggctttgggaccaccagcggaggagcctttggggcgtcc
gcgttcggagccaataacaatgccgggggactctttggcagcactcagaccaagccagga
gggctctttggggcaagtaccttcagccagccagccacgtcgtccactaataccggtttt
ggtttcggcccgtccaccggaacttccagcggcctgtttggcactaccagcacaggcgga
ggactcttctcaacccagaccaatgccttcgcccagaacaagccggcggggtttggcaat
tttgggacaagcaccagcagtggagggttgtttggcaccactaacacagcctccaaccca
tttgggggcacgtctggctccctttttgggtcaaccagcttttccaccgtccctaccggc
accacgattaaattcaacgcacccaccggcacggataccatggtcaagtctggcgtcagc
accaacatcagcaccaagcaccagtgcatcactgctatgaaggagtacgagagcaaatcc
ctagaggagcttcgcctggaagactatcaggccaacaggaaaggcccctccaacccagtg
ggagcaggggccaccccgggcttgttcggatcgtccaccgctacgtccagcacagccaca
gggctctttggctcctccaccaccaacacgggcttttcctacggggcaaacaaaacagcg
tttggagccagtaccaccggttttggcacagggaccggaagtctctttggctcgacgcag
ccgacgcccaccctcttcaacaaaccttttggtcagcccaccaccgcccagaatacgggc
ttttcgttcaccaacaccagcaccctcggacagcccaacaccaacacgatgggcctgttt
ggagcggcccagcccacgcagacgggaggcctcttcggcaccgcggccagcaccaacact
gccgccgcctttgggaccgggaccggaatctttggacagcccaacgccggctttggggtc
ggcggctcgtctctcttcagtaacaagcctgctggctttggcaccaccaccaccagtgcc
ccctcctttgggaccacaaccactgggcttttcggcttcaatgcaaacaccacaggaaac
agcctctttggaaacaagcctgcgaccgggacactgggcccagccctcggggcaggattt
gggacagcccttaatgcaggtcagaattcgctgtttggcaacacgcagcccaaactgggg
ggcacgctcgggaccggagcctttggtgcccctggatttaacacctcgaccgccacgctg
ggcttcggagcgccacagcctgccgtggctctgacggatcccaacgcctctgcggcccag
caggccgttctgcaacagcacctcaacagcttgacctactcgcccttcggggactctccg
ctcttccgaaaccccatgtctgacccaaagaagaaggaggagaggctgaagcccaccaac
ccggcggcccagaaggcgctgaccacgcccacgcattacaagctgacgccccgcccggcc
acccgcgtgcgccccaaagccttgcagacgagcggctcttccaaatcccaccttttcgat
ggtctggacgacgacgagccttccctgaccaatggcgccttcatgcccaagaagagcatc
aagaagctggttttgaagaacctcaacagcaccagcctcttctctcccggcagtgccgaa
gtggatgacattgcctcgccttccatctatcccgagaatggggaccagtcggtgaatgag
aaccaccagccggacgaagagcaggaagaggaaagctactgcccggaaatgtccaggttc
ttagccaactccatcgccaagcccctcccccagaccccagagaacgccccgcacaagcac
cacagcaacagcgtggacgacaccctcgtggccctgaatgtgcggccggggctgcgcaac
gggctggaaaacagcacggaggaagcttcctaccacgaggactccctgcaggaggagcgg
gacaaggagagcgaagaccacttcctccccgcccatcccgcaggaattgtcttgacacga
gtgggctactacaccattccctccctggaggagctggccaagatgacggatgaccaagga
gaatgcttcgtgaccgacttcactatcggccgtaaaggctacggctccatctacttcgag
ggcgaggtcaatttgaccagcttgaacctggacgagatcgtgcacatccgcaggaaagag
gtcatcgtctacccggatgacgaactgaagccccccatcggggagggcctgaacaggaga
gccgaagtcaccttagacggggtttggcccacggacaagacctcgcgctgcttgatcaag
agcccagagcggctggcggagatgaactacgagggtcggctggaagccgtctctcggaaa
cagggagcccagttcaaggagtaccgccctgaaaccggttcctgggtgttcaaggtggcc
cacttctcaaagtacggcctgcaggattccgatgaggaagacgaggacaacctggccaaa
gtggaggccaagaaattaaaaactgctccgttgcccctgccgggccagccgatgtctcac
caaatggctgcacctgggaagctggcacctcctcccaagagcccggaggccgaccatctg
gggaaggttgtcgaatttgacagcgacatggcagacgtcacccaagagctgctgcaagac
gctatggcggaagagaacctggcggaagaacaggagccggtgccggcctcgacccacatc
gcctcctccctggacatcaaccctcacacgctgcagatcatgaaggcttctttgctggcg
gatgaggaagagctggactggatggcggagcgccagtttggcaagcaggctgcagaaaag
gagccttcgcagaagatctgctctccgagactccccatctcctcctcacgaggatggaag
ggccgccccacaggtagccgactgctgcagtccaggctctccaccggctcttttctgctc
ccaaacgcctccctccaggacggccacagtcccaggacttcctcgctgggtggggctttg
cccgccccgccttggcccgccctgtcccccctggcctccgccttcctcgtgccccgctca
gctcccgaagtgcccctgaaaacggtgggggtccgcaggcaggccggcctggtgcccctg
aagaaatccgtcgcctatgggaaaggacggctgctgaaggacatggccctgttcatggga
cgctccttccgcgtcggctgggggcccaactggatcttggtccacagtggggaccggctg
ggccccctgagccagccggaggatcacggggagcccgcagagtacggattcttgccggcc
cccatggcgccaaagccggtctccgagtcccccttcaaggtccacctggagaagctgacc
ttggaaggcaagtcggccgacctcggcgtctacctcctcccgttagagatcaagctgaaa
cacagcaccgtccacctggatgacccctgccccttgctggcccccaaccccggcgtggca
gccatccatgactatgcggcctgggcctcggaggcgtgtgaagacgctgaagaacaggaa
ggcggcgtggcgagggcctgggcgctggtctggcgcctgtgcgaggcgctctggggccac
ctgcaggagctggaggtgcgcctggaggagcccagcgactacgagctgctgctggggcgc
cggagggccttctcccgctggctgtcccgggcggcggccgagcggatccaggaggaggtc
tcgctcagccagaacgacaatcccgccgaggccgtcttcagctacctcaccgggaagcag
atcggccaggcctgccgcctggcgcagcagtcaggggacctccgcctgtctctgctgctg
tcccagctggcgggcagccaggaggtccgggagctgctggccctgcagttggccgactgg
caccagcttcaagcggacgtcttcatccgggacgagcggctgcgcatcttctgcctcctg
gctggcaagccggtgtggcagttgtccgagaagaggaccatcaacgtttgctcccaactg
gactggaaacgctccctgggcatccacctgtggttcctgcttccttccacggcccccctc
tccaaggccctcagcatgtacgaagctgccttccaggactccccagatggagagaggtac
gcctgcactccgctgcccccctacctagaagactccggctgcgtggtggaagacgacaac
tcccagcgcccgctgcgagacgtgtgtttccacctgctgaaattgtacagtgacaggtgc
tacgacttgcatcagctgctcgaccctcgcagcatcaccgccgaccccctggaccaccgt
ctcagctggcacctgtgggaagccctccgtgccttgaactacacccacctgtccgagcag
tgccagggggtgctgaacgccagctacgccgcccagctggagagggaggggctgtgggag
tgggcggtcttcgtcctccttcacacccacaacgctcaaatgcgggaaagggccgtgcgg
gagctgctgagtcgccattgcaagcttctggagttaccagagtcccggaacaaggaggcc
ttcctgacagagaagctgtgcgtccccccggcgtggatctacgaggcgaaggccttgtgg
gccaggagggagggcgacaggccccgcgaggccctctacctcttcaaggctggccactgg
aaccagtgccaccagctggtggtcaggcacttggcctccgacgccattattaacgagaac
tacacctacctgaagggattcttggaagacctgtccagtcctgagcgttgcagcctcatt
cagggctgggacacggccgggctggttttcttagactatctccaggtcatcgagatggtc
aacagaattcagcagctggactgtaccaggtacgagctggaagagctgcactccaaggtg
atctccctctgcagccggatagagctggtccagtgccacagcgccaaggacaggttggct
cagtcagagatggccaagcgcaacgcagacatcctccgtgtggtgctgagcttgcagcac
cctccggactcggcctccggcgccacccccgacgtgcagagagtcccgctgcgcctgctg
gccccccacatcggccggctgcccatgccggaagactacgcgctggaggaactccgcggg
ctgacccagtcctacctgcgggaactgatggtggtggcccagtga
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