Crotalus tigris (Tiger rattlesnake): 120315104
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Entry
120315104 CDS
T08476
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ctig04990
]
120315104
Domain-containing proteins not elsewhere classified [BR:
ctig04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
120315104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
CarboxypepD_reg
ig
CarbopepD_reg_2
TSP_1
TSP1_spondin
TSP1_CFP_C
TTR_TEN1-4
Ig_6
Motif
Other DBs
NCBI-GeneID:
120315104
NCBI-ProteinID:
XP_039214800
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MTELQRQLLPSFLLLAVACISGEQILKQSVSWISAGRKPYSLLTKHNSDNQEMWTSWFNI
DHPGGNGDYERLDAIHFYYRNRVCPRPIRLEARTTDWVPAASSGQVVHSSVHEGFWCLNK
EQSLGQTCFNYAVRFLCPPGSLAGNSKSVWSSWSTWSPCSGKCDQAGVQSRRRTCLADTF
MDPRCKDISEEERGCLGPPCTVCNMTCSRGWENADCSACFCQEHLLRGTVSLQDGAPAAG
TRLYLQAKPSKFLTESDHNGAFEVPGLCPDGKTTLQIKKSKYTTDVITLSESTENYSTVH
IYLKRAEKPYVTTHPESKARREGQSVSFCCHATGNPPPGRYLWFHNDTLLDPALYKYKSN
LILKNLKMNQAGRYFCKTSNEAGSVKSQSARLSLIAKNEAPCDSRPESYLIRLPNDCVQN
STNPSFYYDVGRCSPTTCSGMLREAFWCKDTIAYCCGVSKMETREITCAGYTLPVKVTVE
CGCQKCTKVKVTVRGRAVASDTGEPMRFGHIYMGNNRISMTGYKGTFSVQVPPDTERLVL
TFVDRLQKFVNTTKVLPFNKNGGTVFHEIRMLRKKPPVTLESTETNMISLGEMEGEDPVA
ELEIPPNTFYRLNGELYAGKVKASVTFLDPRNVSSAATAQSDLNFVDAEGDMLPLRTYGM
FSMDFTDETATESLNAGQVKIHLDSAQIQMPEHLQGMKLWSLNPQTGLWEEEGDFELDHS
RRGKREERTFLVGNMEIRERRLFNLDVPENRRCYIKVRAYRSERYLPSEQVAGVVVSVIN
LEPTPGYSTNPRAWGRFDSAVTGSSGVCVPAFCDDQNPEAYSAYVMASLGAEELEAVASS
PQLNPFAVGVRQPYLNKLKYRRTDHLDPNVKKTAFRISVAKPTPNIAEEGNGPIYPYEKL
YECEVALPTAAHFRFYRVEGDKYDYNTIPFNEDDPMNWTEDYLAWWPKPMEFRACYIKVR
INGPLEVIVRSRNTGGTHPWTVGQLYGIRDVRSIRALDHSNLSTACLEFKCSGMLYDQER
VDRTLVKIIPQGSCYRENVNNMLHEYLVNHLPVAVNNDSSQYTMLAPLDPLGHNYGIYTV
TDQDPRTAKEIALGRCFDGTSDSSSRIMKSNVGIALTFNCHEKDTRENVFQSLRNVPSRF
PASPSRERTGVRRRSEIPLVRVTQKVQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactacagaggcagcttctgccttccttccttcttcttgcagttgcctgcatt
tctggtgaacagattttaaaacaatcagttagctggatctctgctggacgaaaaccctac
agccttttgaccaaacacaattcagacaaccaagaaatgtggaccagctggttcaacatt
gatcatcctggagggaacggtgattacgagcgcctggatgccattcacttctattaccga
aacagggtgtgtccacgacccatccggcttgaagcccggaccaccgactgggtccctgcg
gccagttcaggccaggtggtccactccagtgtccatgaagggttctggtgcctgaataag
gagcagtccctggggcaaacatgcttcaattatgccgtgcgttttctctgtcctccaggt
tctttggctggcaattccaaatcagtttggtcttcgtggtcaacatggagcccctgttct
ggaaaatgtgaccaagctggggtgcagagtcggagaaggacatgccttgcagatactttc
atggatccacgctgcaaggacatcagcgaggaagagaggggttgtctgggacccccttgc
acagtttgcaacatgacttgctccaggggttgggagaatgccgactgcagtgcatgtttc
tgccaagaacatttactccgtggcaccgtttctcttcaagatggtgccccagcagctgga
acccgcctctatctgcaagcgaaaccatcaaagttcttaacagagtcagaccacaatggg
gcatttgaagttcctggcctgtgccccgatggaaaaaccacgctacaaattaaaaaatcc
aagtacacgacagatgtgatcactttgtcagagagcactgaaaattactcgaccgttcat
atctacttgaaaagagcagaaaaaccatacgtgacgacgcacccagaaagcaaggcgaga
agagaaggtcagagtgtgtcgttctgttgtcatgccactggaaatccaccccctggcaga
tatttgtggttccacaacgatacactgctggaccctgccctctataaatataaaagcaac
ttgattttgaagaatttgaagatgaaccaagccggacggtatttttgtaagaccagcaat
gaagccggttcggtcaagtctcaaagcgcaaggctttctctcatagcaaagaacgaagca
ccctgcgactccaggcctgagagttatcttatccgactgcccaacgattgcgttcagaac
tcaaccaatccttctttctattacgacgttggaagatgttcacccactacatgctccgga
atgttacgcgaggctttctggtgcaaggacactattgcttattgttgtggggtctccaag
atggaaacgcgagaaatcacctgtgccggctatacacttcctgtcaaggtgactgtggag
tgtggctgccagaagtgcaccaaggtcaaggtcactgtgcgaggaagagctgtggcttct
gatacgggagagcccatgcggtttggtcatatctatatggggaacaacaggatcagcatg
acgggctataaaggcaccttttctgtgcaagtgcccccagacaccgagagactggtcctc
acctttgtggaccgcctgcagaagtttgtaaacacaaccaaagtgttgccgttcaacaaa
aatggcgggacggttttccacgagatcaggatgttaaggaaaaagccaccggtcacacta
gaatccacggagaccaatatgatttccttgggagaaatggagggagaagatccagtagct
gaacttgaaatccctcccaatacgttttacagactgaacggagaactctacgccgggaaa
gtgaaagccagcgtgactttcctggaccccagaaatgtctccagtgcagccacggcacag
tctgacttgaattttgtagatgctgaaggagatatgcttcctctgcggacgtacggcatg
ttttctatggacttcacggatgaaacagccacagaatcactcaatgcgggccaagtgaag
atccacctggactctgctcagatccagatgcctgaacatctgcaagggatgaaactttgg
tctctgaatccgcaaacaggtttgtgggaggaagaaggggattttgaactggaccacagc
aggcgtggaaagagagaggagaggacgtttctggtgggcaacatggagatacgagaaaga
aggcttttcaacttggatgttcctgaaaacagacggtgctacatcaaggtgcgtgcttac
cgaagcgagagatacttgcccagtgaacaggttgccggtgtggttgtttctgttatcaac
ttagaaccaaccccaggatattctaccaaccctagagcttggggacgctttgacagtgcc
gtcactggctctagtggtgtttgtgtcccagctttctgtgatgaccaaaatccagaggcc
tacagtgcctacgtcatggctagtcttggggcagaagaacttgaagcagttgcctcctct
ccccaacttaaccctttcgctgtgggagtgcgacaaccgtacctcaacaagctcaagtac
aggagaacagatcatctggatcccaacgtgaagaaaacagcgttcaggatcagtgtggcc
aagcctactcccaacatcgctgaagagggcaacggtcccatatatccatatgaaaagcta
tatgaatgtgaagttgctctccccactgcagctcacttcaggttttacagagtggaagga
gacaaatatgactacaacaccattccttttaatgaagatgacccgatgaactggacggaa
gattacttggcttggtggcccaagccaatggaattcagggcgtgttatattaaagtgagg
atcaacgggccccttgaagtgattgtgagatctcgcaacacagggggcacccatccatgg
actgtcggccagttgtatggcatcagagatgtgaggagcatccgtgctctggatcattct
aacctttcaacagcgtgtctagaattcaagtgcagtggcatgctgtatgaccaagaacgc
gttgatcggacgctggtgaagatcatcccccagggcagctgttacagggagaacgtgaac
aacatgttgcatgaatatctggtaaaccatctcccagttgcagtgaataatgactccagc
caatataccatgttggctcctctcgatccgcttggtcacaactatgggatctataccgtg
actgatcaagatcctcggacagccaaagaaatagctctgggacgatgttttgatgggaca
tctgatagctcttcaagaattatgaagagcaacgtgggcatagcattaacattcaattgt
catgaaaaagacactcgagaaaacgtattccagtctctacggaacgtgcccagcaggttt
ccagcaagcccttctagagagagaactggagtaagaagacgaagtgaaattcctctggtt
agagtcacacaaaaagtccagtaa
DBGET
integrated database retrieval system
