Crotalus tigris (Tiger rattlesnake): 120315253
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Entry
120315253 CDS
T08476
Symbol
ACAN
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctig00535
]
120315253 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
ctig00536
]
120315253 (ACAN)
04091 Lectins [BR:
ctig04091
]
120315253 (ACAN)
Proteoglycans [BR:
ctig00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
120315253 (ACAN)
Glycosaminoglycan binding proteins [BR:
ctig00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
120315253 (ACAN)
Lectins [BR:
ctig04091
]
C-Type lectins
Lecticans
120315253 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
EGF_TEN
hEGF
Chordopox_A33R
EGF_3
I-set
Motif
Other DBs
NCBI-GeneID:
120315253
NCBI-ProteinID:
XP_039215219
LinkDB
All DBs
Position
Unknown
AA seq
1791 aa
AA seq
DB search
MTTLLLAFVCLRVIAAATSVEVLVDHSATLSVSIPLRSPLRVPLGRTLTIPCYFIDTLGP
ITTAPNTPPVSPRIKWSKLSEDKEVILLVAMDGQVRINTAYQESISLPNYPSIPTDATLE
IKTLRSNDTGIYRCEVIHGIEDSQDMVEVKVKGIVFHYRAISTRYTLNFEKAKQACIQNS
AVIATPEQLQAAYDDGFDQCDAGWLSDQTVRYPMHHPREGCYGDKDGFPGVRTYGIRDTD
ETYDVYCYAEEMEGKVFYATSAEKFTFSEAAEKCHSLGGRLATTGELYLAWKDGMDVCSA
GWLADRSVRYPINKPSPICGGNLVGVRTVYLYVNQTGYPYPHSHYDAICYTGVDFHVIHE
NVTDDSVDELGSGFTIQTFTESDFELELPRNATEEEARGSIATLEPIDLTTTILEVDEGI
TEAPGLFPTGFTDETENRTEIGIWEELENDTASTLDALFPTAIPETSEEYSSWSTATTES
ESASPLTVEEQIVPGTAAPAVDQVPQKPASPTGVVFHYRPSTNRYSLTFVEAQQACLDNH
AAIATPEQLQAAYEEGYEQCDAGWLSDQTVRYPIVVPRSKCAGDKQNFPGVRSYGMRPAS
EKFDAYCYIERLKGEVFFATQTAQFTFLEAQRYCESQNATIASTGQLYAAWRLGQDICQA
GWLADGSLRYPIVNPRPTCGGDKPGVRTIYLYSNQTGFPDPQSRHHVFCFKATPSLYEEI
EEDFITVQMIPGVEEVPSGEETTVGMEFATDSDNQTEWGTEVFPTDTSLLSVSPPVAGPS
TVLPIDAIPEGTSAEAPVTEISASGWTSGAPEITGTVEPSEKPSGFGEFPSGVPETSGLP
SAESGLPSGDISGLSSGVIEVSTLPSGEEELSGISSGTQEEIPGHQEGKSPPEFSGLPSG
FSGDHSGPDLNGSPSGEYDYSGLTSGFPTVSLVNATLTEVVTTATEREMEGKGTVGVSGD
GDVSGFPSADWDRSGTTSGLPSGVDAYGTGDLSGFSSGIDSSGELSSTPDTSELPPGLDV
SGQSSGLLDISGLSSGMDVSGTSVGPPDLSGYVDLSGQPSATDGSGEPSGVTFIDVKLFE
VTTPSSKEEEGKGFVEISGLPSGDEDLSGTTPGILDVSGQPSSGQVDFSGWASGVTEVSG
LPSGQTDISGESSGVDLVSGISSGTYDYSGLTSGFPTVSLVDTTLVEVITQPSVAQELGE
GTSGILEISGLPSGQEQTSGASYDVTTSSGVSSEKVDFSETSSGIPYFGRETDDISGASS
TTASASGDVSGISEIVLVTDSIETVTSPTVLQQVIGGTEATYFHFPESSGEAIDAEISTY
PESTISSPEYPEISSKASTFHETSVGTPFINETSDETSVSTRSHLETSTHYEPGGETSSS
SENYSETSGVPFTSGFPSGTFDERNQFNGDSSGPAPWTVSDTPEKVFSPDVLLSTSSPDV
ELTEHSRHPAETQAETEASAYPTPELETGDVAAPGSPLPSPTATDLLPSERTDWIQLITQ
ATPKSCEEKLCGTGTCHEQEGNITCLCPPGFMGDYCEIDIDECHSSPCLNGATCVDGSHA
FTCLCLPSYGGNRCDVDLAECETGWTKFQGNCYKHFEEKLTWMEAEKLCRKQQSHLSSII
TPEEQEFVNNNAQNYQWIGLSDRAVEDDFRWSDGHSLQYENWRPNQPDNFFAKDEDCVVT
IWHEKGEWNDVPCNYHLPFTCKKGTVSCGDPPAVENARHFGKKKDRYEINALVRYQCNQG
YIQRHVPIIRCQSNGQWEEPRIACIDPSTYKRRLHKRSSRSRSRTNGKMTA
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactactagcatttgtgtgtttgcgtgtcattgctgcagccacctctgtg
gaagttttagtagaccacagcgccacactcagtgtgagcatacctttacgttctcccctg
cgtgttcccttgggaagaacgttgaccattccctgctactttatcgacactttggggcca
atcaccacagctcccaacaccccaccagtgtccccaagaatcaaatggagcaaactatca
gaagacaaagaagttatccttctagtggccatggatgggcaggtacggatcaacactgcc
taccaagaatctatctctctacccaattatccttccataccaactgatgctactttggaa
atcaagacactccggtccaatgatactgggatctaccgctgtgaagtaattcatggtatc
gaggacagccaggacatggtggaggtgaaagttaaagggatcgtgttccattacagagcc
atctctacccgctacactttaaactttgagaaggcaaagcaggcatgcatccagaacagt
gccgtcattgcaactcccgagcaactccaggctgcgtacgatgatggctttgaccagtgc
gatgctggttggttgtctgatcaaacagtcaggtacccaatgcaccatcctcgagaaggt
tgttatggtgacaaggatggatttcctggagtgagaacatatggtattcgagatacagat
gagacatatgatgtctattgttatgcagaggaaatggaaggcaaagtcttctatgccacc
tccgctgagaagttcaccttctcagaagcagcagagaaatgccatagtcttggtggacgt
ttggcaacaacaggagaattgtatctagcctggaaggatgggatggatgtctgcagtgct
ggctggctggcagaccgcagtgtccgttatcccatcaacaaaccaagtcccatctgtggt
ggcaacctggtgggagtacgcacggtgtatctttatgtcaaccagacagggtatccttac
cctcattcgcactatgatgccatttgctacaccggtgttgactttcatgtcatccatgag
aatgtcacagatgactctgtcgatgagctgggcagtggcttcaccatccagacgttcacg
gagtcagattttgagctggaacttccacgcaatgcaaccgaagaagaggctcgaggaagc
attgcaactttggaacctatagacctgaccaccaccatcttggaggtggatgaaggcatt
acagaagctccaggtctctttccaacaggtttcaccgatgagacagagaacaggactgag
atcgggatctgggaggagctagaaaatgatactgcctcaaccctggatgcactcttcccc
acggctatcccagaaacgtcagaggaatatagttcatggtccactgccacaacagaatcc
gaatcagcctcaccgttgacggtagaagagcagattgtgccagggacagctgctcctgct
gtggatcaagtccctcagaaacccgcttctcccacaggtgtcgtttttcattaccggcca
tccaccaacagatattccctgacttttgttgaagctcagcaagcttgcctagataatcat
gctgctattgctactccagagcaactacaggctgcctatgaagaagggtatgagcagtgt
gatgctggctggctaagtgaccagacagtcaggtatcccattgttgttccacgcagtaaa
tgtgcaggagacaagcagaacttccctggagtgcgatcctatggtatgcgcccagcatca
gaaaagtttgatgcctactgttacattgaaagactgaaaggtgaggtcttctttgcaact
cagacagcacaattcactttcctggaagcccaaagatattgtgagagtcaaaacgcaacc
atagcttccactggacaactctacgctgcctggaggttgggccaagatatctgccaggcc
ggctggttggctgatggcagcctccgatatcccatcgttaatccccgccctacctgcggt
ggagacaagcctggtgtgagaacgatttacttgtactccaatcagacaggattccctgac
ccccaatccaggcatcatgtcttttgcttcaaagcaacaccatctttgtatgaggaaata
gaagaagacttcattacagttcagatgatccccggtgtagaagaagttccttctggggaa
gaaacaactgtgggaatggaatttgccactgattctgataatcaaactgagtggggaaca
gaagtatttccaactgacacatcactgttatctgtgagtccaccagttgcgggtccatca
actgttcttcccattgatgcaatacctgagggaacaagtgcagaagctccagtcacagaa
atatctgcttctggctggacttctggagctccagagataactggaaccgtcgagcctagt
gaaaaaccttcaggatttggagaatttccctctggggtccctgaaacgagtgggctgcct
tctgcagagagtgggctaccctcaggagacataagtggcttgtcttctggcgttattgaa
gtcagcaccttaccttctggagaagaagaactatcagggattagttcaggaacccaagaa
gaaatacctgggcaccaggaaggcaaaagtcccccagaatttagtgggttgccttctgga
tttagtggagaccattctggtcctgacctcaatggatcaccatctggagagtatgattat
agtggtctcacatctggatttcctaccgtgtctctggtgaatgccactttgacagaagtt
gtgaccacagcaacagaaagggaaatggaagggaaagggacagttggagtcagtggagat
ggagatgtatcaggcttcccctctgccgattgggataggagtggcacaaccagtggattg
ccttctggagttgatgcctatggaaccggtgacctcagtgggttttcttctggaattgat
agcagtggagaactatctagcacacctgataccagtgaattaccaccaggacttgatgtt
agtggacagtcatctggcctattagacatcagtggattgtcctcaggaatggatgtcagt
ggaacatctgttgggccacctgatctaagtggctatgtggacttaagtggccaaccttca
gctactgatgggagtggtgaaccttcaggggttaccttcattgatgttaaattgtttgaa
gtgacaactccttcatctaaagaagaagaagggaaaggatttgtagaaataagtggatta
ccttcaggagatgaagatctatcaggcacaacaccaggaattttagatgtgagtggccag
ccttcttctggacaagtagacttcagtgggtgggcttcaggagttactgaagtcagtgga
cttccaagtggacaaacagacattagtggagaaagctctggtgttgatcttgtcagtggc
atttcatccggaacatatgattatagtggtctcacatcagggtttcctacagtttccctt
gtggatacaactttggtggaagtaataacacagccttctgttgcgcaagaattaggagaa
gggacatctgggatattagaaataagtgggcttccttcaggacaggaacaaacatcagga
gcatcttatgatgtgacaacatctagtggagtatcatctgagaaagttgacttcagcgag
acctcctcaggcattccatattttggtagagaaactgatgatataagtggtgcatcttca
accacagccagtgctagtggtgatgtctctggaatctcagaaattgtcttagtaactgat
tccatagaaacagtgacaagcccaacagttttacagcaagtgattggaggaacagaggca
acatatttccattttcctgaatccagtggagaagccattgatgcagaaatttctacatat
cctgaaagtaccatatcttccccagaatatcctgaaatcagtagtaaggcatccacattt
catgaaactagtgtaggaaccccttttattaatgaaacaagtgatgaaacatcagtctca
acaagaagccacctagaaacttcaacccattatgaaccaggtggagaaacatcttcatca
tctgaaaactactcagaaacatctggggtaccattcaccagtggctttccctctgggact
tttgatgaaaggaatcagtttaatggagatagttcaggtccagcaccttggacagtgtca
gatacaccagagaaagtcttttcgccagatgtcttacttagtaccagcagtccagatgtt
gaattaactgaacactcgaggcatccagcagagactcaggctgaaacagaggccagtgca
tatccaacaccagagttggaaacaggagatgttgctgctccagggagtccactaccatca
ccaacagctaccgatctcctcccatcagagaggactgattggatacagcttattacacaa
gctacacctaagagttgtgaggagaagctatgtggaactgggacctgccacgaacaagaa
ggaaacatcacctgtttatgcccacctggatttatgggtgattactgtgagatagacatt
gatgagtgccactccagtccctgtctgaatggagctacttgtgtcgatggcagccacgct
ttcacatgcttatgccttcccagctacggagggaaccgttgtgacgttgatctggcagaa
tgtgaaacaggctggaccaaatttcaaggtaactgctacaagcattttgaagagaaactc
acctggatggaggcagagaaactgtgccgaaaacagcaatcccacctgagcagtatcatc
acacctgaagagcaagaatttgtgaacaacaatgcacagaactaccagtggattggatta
agtgaccgagcagtggaagatgactttcgctggtctgatggacattctcttcaatatgag
aactggcgacctaaccaacccgataacttttttgccaaagacgaagactgtgtagtaacg
atctggcatgagaagggtgaatggaatgatgtcccttgcaattaccacctgcccttcact
tgcaaaaaaggaacagtttcctgtggagaccctcccgcagttgagaatgctaggcacttt
ggcaaaaagaaagaccgctatgagatcaatgctctggtgcgctaccagtgcaatcagggt
tacatacagcggcatgtgcccatcatccgatgccaatcaaatgggcaatgggaagagcct
cggatagcctgcatagacccctccacctataaacgtagactacacaagagaagttcacgg
tcccgatcaaggaccaatggaaagatgacggcatga
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integrated database retrieval system
