Crotalus tigris (Tiger rattlesnake): 120315265
Help
Entry
120315265 CDS
T08476
Symbol
TMC3
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctig02000
]
120315265 (TMC3)
03037 Cilium and associated proteins [BR:
ctig03037
]
120315265 (TMC3)
Transporters [BR:
ctig02000
]
Other transporters
Pores ion channels [TC:
1
]
120315265 (TMC3)
Cilium and associated proteins [BR:
ctig03037
]
Other cilia and associated proteins
Stereociliary proteins
120315265 (TMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF6567
TMEM43
Orf78
Motif
Other DBs
NCBI-GeneID:
120315265
NCBI-ProteinID:
XP_039215259
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MSFGGSSSAAKNTRTCKRSKTVKRHASMCFLWGRAIFSNSDEDNGDEKVDSNDPEQIFQN
IQFQKEIMANICCRPWPMRQKLRALRQAKEIVLKYEGRLTRTRGYQAAGAELWRKFIRLA
YNFMVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPEILAGDA
FGSTPNKQIPSDQLHSAQDLDTIWSLGGYLQYSVLFYGYYGQTRKIGSAGYRLPLAYFLV
GMAVFAYSFIILLKKMAKNSRMSLASASDENYTFCWRVFCAWDYLIGNPEAAESKSAAIV
NSIREAILEEQEKKKSTNLAVTISLRIIANILVLLSLAGSIYIIYFVVDRSQKLERMKKE
LTLWEKNEVSVVVSLITMLAPSAFELIAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIA
LLDKVDSMSIVEAEVHKNGSNAVGTTTFLAAKTLLEHSFSTPIPNVQMIKNGTFFLSENH
TQSYAHLVELNSTAPYDANSESHQHQCWETYVGQEMLKLSIIDMLFTVASILLIDFFRGL
FVRYLSDCWCWDLESNFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGL
MYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKPSLNCGPFS
GQEKIYDIVSETIRNDFPPWFNSVMAYMSSPVVVLPALLLLFMLIYYLQSIARSLKFTNN
QLRMQIQTERTEDKKKVVKMAAGEQKLPKVLGIIGLYVRSSFSQNAIIIESKSSRIQNVE
GNGKRPEQETDVISQESSARSSTPRKNGSVVNFESPKPSQIQTISQSVPPPEILKAVGPS
PAKDNPGVPTPVAPIPVTPTPPIPEMVKPRTEPSINRYPNPIHGSASELCKAKVYTPVKV
KKRMEDAHSEPLFRKCPPQMKPESHGAPGGPPFVGRRAHTAKYYIVNEHQPRKKILRATT
RLPRNVRMDEAGDFVELYPRHIRRYVVRTPRRAYSPHYTEEEEEEEGYRRGVTKQTHHRP
RSLSDLRALPRLYIGEWTDNQVLPSRSLAKMHYKSWEDGFGLTYGRGPHPHRKIHLKNIE
FEQQYPEHPGKAKAKPSPSPTESDSISPESSSDQLTSGNDQYIQVLPSKEKYLKSGAKGT
PQKTKSGVELNLAEMNDLICSNV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggaggtagcagttcagctgcgaaaaacacaagaacctgcaagagatcgaaa
actgtgaagcgacatgccagcatgtgtttcttgtggggtcgggctatttttagcaactca
gatgaagataatggggatgagaaggtcgacagcaatgatccggaacagatcttccagaac
atacaatttcagaaagaaattatggccaacatttgttgccggccatggcccatgaggcaa
aaactccgagcattgagacaagctaaagagattgtattgaagtacgaaggtcggctgact
cggacaagaggctatcaagctgctggagcagagctatggagaaaatttattaggcttgca
tataacttcatggtcatctttattccttgggaaatgagaatcaagaaaattgaaagtcac
tttggctcaggggttgcctcttactttatctttttgcgatggctgtttggcatcaacatt
gttctcaccataatgacaggagcctttgtggttttgccagaaatcttggctggagatgct
tttggaagtactcccaacaagcagatccccagtgatcaacttcattctgcacaggatctg
gataccatctggtctttggggggttaccttcagtattccgttttgttctatggatactat
ggacagacaaggaaaattgggagtgctggttaccggctgccccttgcctacttccttgtc
ggaatggcggtgtttgcctacagttttatcattctgttgaaaaaaatggccaaaaattcc
agaatgagccttgctagtgcttctgatgaaaactacaccttttgctggcgagtgttttgt
gcttgggactatttaattggcaaccctgaggctgcagagagcaaatccgctgccatagtg
aacagcatcagggaagctatattggaagagcaggaaaagaaaaagagcacaaatctagcg
gtgacaataagcttaagaatcattgcaaatatcttggtccttctctcactggctggaagt
atttacatcatttattttgtcgtggatcgatcccagaagttggaaaggatgaagaaagag
ctgaccttgtgggaaaaaaatgaagtgagcgtagttgtttccctgattaccatgcttgca
ccatctgcctttgaactgatagctgccctggagatgtatcatcccagaactactctccgc
ttccagctcgccagagtgttggtcttatatttgggaaatctctacagcttgatcattgca
cttctggataaagtggatagcatgagcattgttgaggctgaggttcataaaaatggaagc
aacgccgtgggtaccaccaccttcttagcagcaaaaaccctcctagagcacagcttttca
accccaattccaaatgtgcaaatgattaagaatggcactttctttctatctgagaatcac
acccaaagctacgctcacctggttgaactcaacagtacagcaccttacgacgccaacagc
gaaagtcaccaacaccaatgctgggagacctatgttggtcaagagatgttgaaattgtcc
attatcgatatgctgttcactgtggctagcatcctcctgattgattttttccgtggtctt
tttgtccggtacttaagtgactgctggtgctgggatctggaaagcaattttccagaatat
ggggaatttaaaatagcagaaaatgtcctgcatttggtctacaatcaagggatgatctgg
atgggagccttcttttctccttgccttcctgcattcaacgtcctaaagctgattgggctg
atgtacctcagaagctgggcagtcttgacctgcaatgtccctcatcagcaagtcttccga
gcttcaagatctaacaacttctacttagctatgctgctatttatgctctttctgtgtatg
ctcccaactatttttgcaattgctcgctacaagccatctctaaactgtggcccatttagc
gggcaagaaaaaatctatgacattgtgtccgaaactattcgaaacgactttcctccttgg
tttaactctgtgatggcttatatgagtagtcccgtggtggtccttccagctctattatta
ctcttcatgctaatatattacctgcagagcattgcgaggtcattaaaattcaccaacaac
caactaaggatgcagatccaaacagaaagaactgaagacaagaaaaaagtggtcaaaatg
gcagcaggtgagcaaaaacttcctaaggtgcttggcattattggactgtatgttcggtca
tctttttcacaaaatgcaataataattgaaagcaaaagctctagaatccaaaacgtagaa
ggaaatggcaagaggcctgaacaggagactgacgtcatcagtcaggagtcttcagctcgc
tcctcaacccctaggaaaaatggcagtgtagtgaactttgagtctcccaaacccagccaa
atacagacaatatctcaatcagttccaccccctgagattctgaaagcagtgggcccatcc
ccagcaaaagataatccaggtgttccaacacctgtagcaccgatacctgtcactccaaca
cctcctattccagagatggtgaagcctagaacagaaccttcaatcaacagataccccaac
cccatccatgggagtgctagtgaactctgcaaagccaaagtctatactcctgtaaaggtg
aagaagcgcatggaagatgctcattcagaacccttgttcaggaaatgccccccacaaatg
aagccggagtctcatggggcccccgggggtcccccttttgtgggccgcagagctcacacg
gccaagtactacattgtcaacgagcatcagccccgcaaaaaaatcctccgtgccacaacc
cggctgccaaggaatgtccggatggatgaggcaggggactttgtggagttgtatccacgt
cacatccgaaggtatgtggttcgaacaccccgcagggcctactcccctcattacactgag
gaggaagaggaagaagaagggtacagaagaggcgtcactaagcagactcatcaccgcccg
cggtccctgtcggatctccgagccctcccccgcctctacattggggagtggaccgacaac
caggttctgccaagcaggtccctagcaaaaatgcactacaagtcttgggaagatggtttc
ggtttgacttacggtagaggcccgcacccccaccgaaagatacacttgaagaatattgaa
tttgagcagcaatatccggaacaccctggcaaagccaaggccaagccgtctccatctccc
acggagtctgattccatctctcctgaatcgagcagtgatcagctcaccagtggcaacgat
cagtacatccaagtcctccccagcaaagagaaatatctgaaatcaggagcgaaaggaact
cctcaaaagacaaagtctggtgtggagttgaacctggctgaaatgaatgacctgatatgt
tccaatgtctaa
DBGET
integrated database retrieval system
