Crotalus tigris (Tiger rattlesnake): 120315276
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Entry
120315276 CDS
T08476
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120315276 (CHD2)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120315276 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Myb_DNA-binding
DUF1388
Motif
Other DBs
NCBI-GeneID:
120315276
NCBI-ProteinID:
XP_039215291
LinkDB
All DBs
Position
Unknown
AA seq
1869 aa
AA seq
DB search
MKQPEALLLQSHRSGSETYSEVKLVSRHRYPLPLEQQSQNGNPHPGVLGDSPRLFWSCHS
ASEEGSASDSGSQSDSEQGSDHGSESNSSSESSESQSESESGSTASKSQRTPPEAKEKPA
SKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFTINDEGHSESENESPKRRGPRQVKK
IGKWKREGSEDDDDEEDDEDQGSSGESEQEVKKVKSRRLCSRRTASKSLPKRSSKPQRAN
RRRKTESSEEDDDDEEDEAPKRQTKRRAAKNVSYKEDDDFETDSDDLIEMTGEGAEEQQS
NSETIEKVLEKRMGKKGATGASTTVYSTEANGDPCADFDPEKEEGEVQYLIKWKGWSYIH
STWESEESLQQQKVKGLKKLENFKKKEEEINSWLEKVTPEDIEYYNCQQELAAELNKQYQ
IVERVIAVKTNKSPTPGTEFPAHNRKSCSNEPEYLCKWMGLPYAECSWEDEALISKKFQH
CIDSFNSRNNSKAMPTRDCKVLKQRPRFVALKKQPSYIGGDNLELRDYQLEGLNWLAHSW
CKNNSVILADEMGLGKTIQTISFLCCLFYQHQLYGPSMIVVPLSTLTSWQREFEIWAPEI
NVVVYIGDQMSRNTIREYEWIHSQTKRLKFNVLITTYEILLKDKTVLGSINWAFLGVDEA
HRLKNDDSLLYKTLIDFKSNQRLLITGTPLQNSLRELWSLLHFIMPEKFESWEDFEEDHG
KGRENGYQGLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKA
LSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENNQERLQSLIRSSGKLILLDKL
LSRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNAEGSE
DFIFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKG
TVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNSSDRSNTNPFNKEELTAILKFGAEDL
FKEAEGEESEPQEMDIEEILRLAETRENEPSTSATDELLSQFKVANFATMEEEEAEVEEI
SQKDWENIIPEEQRKKVEEEERQKELDEIYMLPRIRSSAKKAQPNDSDSDVDLKRKLQRS
SGSETETEESDDDKRPKRRGRPRSAQKDTVEGFTDTEIRRFIKAYKKFGVPLERLECIAR
DAELVDKSVADLKRLGELLHNSCASAMQEYEEHLKENPTENKGPGKRKGPTIKISGVQVN
VKAIIQHEQEFVMLHQIIPSDPVERARFHLNCRVKSAHFDTDWGVEEDSCLLRGIYEHGC
GNWELIKSDPELNLTDKILPVETDKKPQGKQLQARVDYLLKLIKRDQKRKESVTNTEEAE
AKVAKPRIRKENKPPKIKEEPGNEVSSAQPADNLSVEGQKKEDGVNKNTLKKKLKKENKD
KQPAKSQEKEGEKERKKEKDKKQQDKKEQPKGNEAKSGHKGKKTLTQGPVHITAGSEPIP
IDEEEEDDLDHATFTICKEQMRPVKKALKQLDKPEKGLSEQEQLEQTRSCLLKIGDHIAE
CLKPHIEQEVLNVWRRNLWVFVSKFTEFNAKKLHKIYKMASKKRARELAEQKKKEEATSG
KRPLRPEAPGPSRDTQMTSVPHSPHAQRLQQPPPHPPQMHGHPRENYKQSSRRHFSNTER
SEWQRDRKFNYSGNAVQSWSRNRYYPYEQPWYKERHYADRQVRAEQYRSSANYRPSNVSR
KRPYEQYNSERDYRDQREYRYYHDAKRRRIDEFRSQNYQQDFRRMSDHRPPLGYHGQGPS
DHYRPFHPDKSADYKQLLPPPHSQIPDPRSPASQKSPLGVKSPIQHRSPLDRPLEQKNNP
EYNWSGWKT
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcctgaagccttgttgctacaaagccatagaagtgggtctgaaacatactca
gaagtcaagttggtgtctaggcacagatatcctctacctcttgagcagcagagtcaaaac
gggaacccccatccgggtgttttaggggactcccccagactgttttggagttgtcactcg
gcatctgaagagggctcagcttctgactcggggagccagtcagacagtgagcaaggcagt
gatcatggaagtgaatccaacagcagctccgagtcttcagaaagtcagtccgaatcagag
agcgggtccacagcatccaagtctcagcggacccctccggaagctaaggagaaaccagca
tccaagaaagaaaggatagctgacgtcaaaaaaatgtgggaagaatatcccgatgtttac
ggggtgagacgatccaatcgtagcagacaggagccttcgcgttttactataaacgacgag
gggcatagcgagtctgaaaatgagagtcccaaaagaagagggccaaggcaagtgaaaaaa
ataggtaaatggaaaagggagggatctgaggatgatgatgatgaagaagatgatgaagat
caaggctccagtggagagagcgaacaagaagtgaagaaagtgaaatccaggagactttgt
tcaagaagaacagcgagcaaatccctcccaaaaaggagcagcaaaccccagcgtgcaaac
aggcggaggaaaaccgaatcatcagaggaagatgatgatgatgaagaagatgaggctccc
aaaagacaaactaagcgccgagcagccaaaaatgtcagttacaaggaagacgatgacttt
gagaccgattccgatgacttgattgagatgacaggagaaggagcagaggagcagcagagt
aacagcgaaaccattgagaaagtgctggagaagagaatgggcaagaaaggagccactggg
gcctccaccacggtctactcaacagaagccaacggtgatccctgtgccgattttgaccca
gaaaaggaggaaggggaggtgcagtacttaattaaatggaaaggttggtcgtatatccac
agcacgtgggaaagtgaggaatccttgcagcagcagaaagtgaaaggtctcaagaagctg
gagaacttcaagaagaaagaggaagaaatcaacagttggttggaaaaagtcactccagaa
gacatcgagtattacaactgccaacaggagctggcggctgaattgaacaagcagtaccag
attgtggaaagagtgattgcggtgaaaacaaacaaatcgccaactcctggaactgaattt
ccagctcacaaccgcaagtcctgctccaatgagccagaatacctttgcaagtggatgggg
cttccttacgcagagtgtagttgggaagacgaagctctgatcagcaaaaaattccagcac
tgtatcgatagcttcaacagtaggaacaactccaaagccatgccgactcgggactgcaag
gtgctgaagcaaagacctcgctttgtggccttgaaaaagcaaccctcctacattggtgga
gacaatctggagctccgggactatcagctggaaggcctaaattggttggctcactcctgg
tgcaagaacaacagtgtcatcttggcagacgagatgggcttgggcaagaccatccagacc
atttctttcctctgctgcctcttctatcagcaccagctctatggtccttccatgattgtg
gtgcccttgtcaaccctaacctcatggcagagggaatttgaaatctgggccccggagatc
aacgtggttgtctacattggagatcagatgagcaggaacactatccgtgagtacgagtgg
atccactctcagaccaaacggctgaagttcaacgtgctgatcacaacgtacgagatactc
ttgaaagacaagacagttctcggaagcatcaactgggcgttcctaggggtggatgaagcc
catcgcttgaagaacgatgattctttgctctacaagacactgattgacttcaagtctaac
cagcgcctgctcatcactgggacaccccttcagaattccctcagagagctatggtctctg
ctccattttatcatgccagagaagtttgaatcctgggaagactttgaagaggaccatggc
aaaggacgcgagaatgggtaccagggtctgcataaagtcctggaaccgtttctcctgcgc
agggtgaagaaagacgtggagaaatccctccccgccaaagtggagcagatcctgcgggtg
gagatgtctgccctccagaagcagtattacaaatggattttaacaaggaattacaaagcc
ctgtccaagggaacacgtggcagtacttccggcttcctgaacatcgtgatggagctgaag
aaatgttgcaatcactgttacctgatcaaacctccagaagagaacgagagggaaaacaat
caggagaggctgcagtctttaatcaggagcagtggaaaactcattcttctggacaaactg
ctcagcaggctccgcgagaggggcaaccgagtactcattttctcccagatggtgagaatg
ttggacatcttggcggagtatctgaccatcaagcactaccctttccagcgcctggacggt
tccatcaaaggagaaatccgaaaacaggccctggatcatttcaacgctgaaggctcagag
gacttcatctttctgctctccacgcgagccggcggcctggggatcaacttggcatcggct
gacacggtggtgatctttgattcggattggaacccccagaatgacctgcaggcccaggct
cgggctcaccggattgggcaaaagaaacaagtaaatatctatcgcttggttacaaaggga
acagtggaagaagagattatagaaagagcgaagaagaagatggtgctggaccatctcgtg
atacaacggatggataccaccggacggacggttttggacaatagctcggacagatccaat
acaaacccattcaacaaggaggaactgacagccatcctgaagtttggagctgaagacctt
tttaaagaagcagaaggagaagaatctgaaccacaggaaatggacattgaggaaatctta
cgcctggctgagacacgagagaacgaaccatccacaagtgcaaccgacgaactgctttcc
cagtttaaggtagcaaacttcgccacaatggaggaggaagaagccgaggtggaagaaata
tctcaaaaggattgggaaaacatcattcctgaggaacagaggaagaaagtggaagaggag
gagcgacaaaaggaactagatgagatatacatgctgcccagaattcgcagctcagccaaa
aaggctcaacccaatgacagtgattcagatgttgacctaaagagaaagctacagagatcg
tctggctcagagaccgagacggaagaatcagatgatgacaaaaggcccaaacgcagagga
agacctcgcagtgctcagaaggacacggtggaaggatttacagacaccgaaatcagaaga
tttatcaaggcttacaagaagtttggtgttcctttggagcgactggaatgcattgctcgg
gatgccgaacttgtggacaaatctgtagctgatctgaaacgtttgggggaacttctccat
aacagttgtgcatcagccatgcaggagtacgaggagcatctgaaggagaacccaactgaa
aacaaaggaccagggaaaagaaagggacccacaattaagatctctggagtccaggtgaat
gtcaaagccattattcagcatgagcaggagtttgtgatgctccatcagatcattccatct
gacccagtggagagggcaaggttccatctgaactgccgtgtcaaatctgcccatttcgat
acagactggggagtggaagaggactcttgcttgctgcggggaatttacgagcacggatgt
gggaactgggagctcatcaaatcagatccagaactgaacctgaccgacaagattttacca
gttgagaccgataaaaagccacaggggaagcagctccaggcacgagtagattatctgctg
aaacttatcaaaagagaccagaaaaggaaggaaagtgtgacaaacacagaggaggccgaa
gccaaagtagcgaagcctcgaatccggaaggaaaacaagccccccaaaatcaaggaggag
ccaggaaacgaggtttcttctgcacagcctgcagacaacctgtcagtagaaggacagaag
aaggaggacggggtgaataagaataccctgaaaaagaagttgaagaaagagaacaaggat
aagcagccagccaaaagccaagaaaaggaaggggaaaaggaaaggaagaaagaaaaggat
aaaaagcaacaggataaaaaagaacagccaaaaggcaacgaggccaaatctggccacaaa
gggaagaagacgctgactcagggtcccgtccacatcacggcaggaagtgagcctatcccc
attgatgaagaggaagaggatgacttagaccatgcaaccttcaccatttgcaaagagcag
atgaggccagtcaagaaggccctgaagcagttggataagccagaaaaaggactttcagaa
caagagcagctggagcaaactcggagttgcctgctcaagataggagaccatattgctgaa
tgtttgaaaccccacattgaacaggaagttcttaatgtatggagaaggaatctctgggtg
tttgtatcgaagtttactgaatttaacgccaaaaaattgcataagatatacaagatggct
agtaaaaaacgagcccgggaactggcggaacagaagaagaaggaagaggcaacgagcggc
aagcggccccttcgtccagaagctcctgggcccagtcgagatactcagatgacttctgtc
ccccatagccctcatgctcaaaggctgcagcagccacctcctcaccctccccagatgcat
ggacatccacgggagaactacaagcagtcaagtagaaggcatttcagcaacacagaacgg
agcgagtggcagagggaccgcaaatttaattacagtggcaatgccgttcaaagttggagc
agaaaccgttactacccatatgagcagccctggtacaaggagcgccactatgcggatcgc
caggtgcgcgcagaacagtatcggagctcagcaaactaccggccaagcaacgtctctcgt
aaacgcccgtatgagcagtacaacagtgaacgagattatcgggaccagcgtgaatacaga
tactaccatgatgccaagagacgaagaatcgatgaattccggtcccagaattaccaacaa
gatttccggaggatgtctgaccacagaccccctttgggttatcatgggcaagggccttca
gaccattacaggcctttccacccagacaaatctgctgattacaagcaactccttccccct
cctcactcccagatccctgatcctcgctctccagcttctcagaaatctccacttggtgtc
aagtctcccatccagcaccgatcacctctggataggccgttagagcagaagaacaatcca
gagtataactggagtggctggaaaacctag
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integrated database retrieval system
