Crotalus tigris (Tiger rattlesnake): 120315541
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Entry
120315541 CDS
T08476
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120315541 (ZSWIM8)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
120315541 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
120315541
NCBI-ProteinID:
XP_039215971
LinkDB
All DBs
Position
Unknown
AA seq
1820 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GSVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQIVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDTNAAPLLE
ILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRGNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPHRRRDLCTQLRQWQLKVIDNVKRGQHKKSLEKLFHGFKPAVEACYFNWEEAY
PIPGITYSSADKKNSFCWVKAIQQRNCRPPCIENFSDGGRSHGTDAMGTCLQLGDRSRLA
SQEPAVRPKELIGKRKVVSEGPQRVLRRLSAEGDKASYKTTVNKGKLPVGKNLASKHGGK
RRMSSEDSSLEPDLAELTLDDSSLALGAEASNTFSFTDSPLSRSYRDNFEDEGGVYFSEA
AEPAHRSSPSTKKLSKEPVEEVGSGDDDLHGPDESSAGVCPKPKQVEENGAAGGEEEEDD
YQVYYLNTQEVAKEEDEKAEGGIEEEQDMFAGIKPLEQENRMEVLFACAEALHAHGYSSE
ACRLTVELAKDLLANPPDLKVEQPPTKGKKNKVSTSKQTWIATNTLSKAAFLLTVLSERQ
EYHNLAFQIGMFALELQRPPASTKALEVKLAYQESEIVALLKKIPLGSSEMNTIRGRAEE
LREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNNEMPGDEELGFEAAVAA
LGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQT
LSSFYSSSKPTVPNQKSPSKHATQSAAPMQHLPGTSVAQQTGVPPAVQSNPSEPFMEKTT
QENPQRSPCDPPVESSILKQEGKVPSRIALGSRGGYNGRCWGSPVRQKKKHTGMASIDSS
APETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARA
KTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGG
HQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVEC
WDGHLTPPEVASLADRASRARDSNMVRSAAELALSCLPHAHALNPNEIQRALVQCKEQDN
LMLEKACLAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGVTLAQREGATGCSANGARAP
CETVRGQPDTRVTSESATVTVAAAVTAAATVVPVISVGSTIYQQHTVAGPAMAHAHTQGL
HPYTTLQTHIPCNPQYISHPLQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTTPSLA
AAAVSFPGVAVPSMTQIAMHPYHAETGLSLSSNVAIGSVHAGSTFPAIQGTSLTSLSSQP
SSLVTGGFPSEDEQHSQPVSAQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYT
EDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMESLQRLNPAHVHNHLRTPAF
HQLVQRCQQAYIQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKR
SKQTKDLWQRVSLEMTTFSP
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgccgagtgggaagacggggagaggttttccttcgaagactcggac
cgcttcgaggaagactcgctttgctccttcatttccgaggcggagagcctgtgccagaac
tggagaggatggcggaaacagtcagccggacccaactcgcccactgtcaaaatgaaagat
gggtcggtgatcccactggtggaactgtcagccaagcaggtggcatttcacattcccttt
gaagtagtggaaaaagtctacccacctgtgcctgagcaactgcagcttcgtattgccttt
tggagctttccagagaacgaagaagatatcaggctatattcatgcttggcaaatggcagt
gcagatgagttccaacgaggcgagcaactgttcagaatgagggctgttaaagacccattg
cagataggtttccacctgagtgctacagtggtgcctccacagatagtgccacccaaagga
gcctacaacgtggcagtaatgtttgacagatgcaggatcacctcatgcagctgtacttgt
ggagctggggctaaatggtgtgcccatgtggtagccctttgtctctttcggatacacaat
gcatctgcagtttgcttgcgagcgcctgtctctgagtccttgtctcgactacaaagagat
caattgcagaaatttgcacaatatctcatcagtgaactccctcaacagatacttccaaca
gctcagcgtctacttgatgagctgctatcctctcagtccactgccatcaacactgtatgt
ggagccccagatcctactgctggtccatctgcctctgatcaaagcacctggtacttggat
gaatctacattaagtgataacataaagaaaactcttcacaaattttgtgggccctctcct
gttgtatttagtgatgtgaattccatgtacctgtcctccacggaacccccagctgctgct
gagtgggcctgcctgttacgccccctaagaggaagagaacctgaaggcatatggaacctg
ctttcaattgttcgcgaaatgtttaagagacgggataccaatgcagctcctcttctggag
atcctgacagaccagtgtctaacatatgaacagataactggctggtggtacagtgtaagg
acatctgcatcccatagtagtgcaagtggacatactggccggggcaatggccagtcagaa
gttgctgctcacgcttgtgcaagtatgtgtgacgagatggtggttctttggagacttgct
gtcttggatccaaccatcagtcctcatcggcgaagggacttgtgcacacagctaaggcag
tggcagttgaaggtaatagacaatgtcaaaagagggcagcataagaagtctcttgagaag
ctattccatggattcaagccagctgtggaagcttgctatttcaattgggaggaggcgtat
cctatcccaggcatcacctacagcagtgctgacaaaaagaactctttttgttgggtcaag
gccatccagcagaggaactgcaggccaccgtgtatagaaaatttttccgatggagggaga
agccacgggacagatgccatggggacttgtttgcagctgggagaccggtcacgcctggcg
tctcaggagccagctgtgcgccccaaagaacttattgggaaacggaaagtggtgtccgaa
ggcccccagcgggttctgagaagactttcagcggaaggggacaaagcttcctataaaaca
accgtgaacaagggcaagcttccggtgggaaagaacctagccagcaaacatggcgggaag
cgtcgtatgagcagcgaggacagttctttggagccggacttggccgagttgactttagat
gacagtagtttggctctcggagcagaggcaagcaacaccttcagcttcacagacagcccg
ctgagcagaagctacagagataactttgaggatgaaggtggggtgtatttctctgaggca
gccgagcctgcccacagaagcagtccttccaccaagaagctttccaaggaacccgtggag
gaagtgggcagcggagacgatgatctccacggcccggatgaaagtagcgccggggtatgt
cccaagccaaaacaggtggaggaaaatggtgctgctggaggagaagaggaagaagatgac
tatcaagtatattatttaaacacccaggaggtggctaaggaagaagatgagaaagcagag
ggtgggattgaagaagagcaggacatgttcgctggaataaaacccttggagcaagaaaac
cgaatggaggtcctgtttgcctgcgcagaggctcttcacgcacacggctatagcagcgaa
gcgtgccgtctcactgttgaacttgcaaaagacttgctggctaatcctcctgatctcaaa
gtggagcaacccccaaccaagggaaagaagaataaagtatctaccagcaaacagacttgg
atagcaaccaacactttatccaaagctgcttttctactgactgtactgagtgaacggcaa
gaatatcacaatctagctttccagattggcatgtttgctctggagttacagaggccgcca
gcatctaccaaggccctggaggtcaagctggcttaccaggagtctgaaatcgtggccttg
ttgaagaagatcccacttggttctagcgagatgaatactattcgggggagagccgaagag
ctgagggaaggaaccctgtgtgattaccgccctgtcctgcctctcatgctcgctagcttc
atatttgatgtcttatgtgctccagtggtttctcctacagggtcaagacccccaagccgt
aattggaacaatgaaatgcctggagatgaagaacttggctttgaggcagccgtggcagca
cttggcatgaaaacaacagtgagtgaagcagagcatcctctcctgtgtgaaggtacccga
agagagaaaggagatctagctttagccctgatgatcacttacaaggatgatcagtctaaa
ctcaaaaaaattttagataagctgctggacagggaaagccagacccacaagcctcaaact
ctgagttccttttactcatccagcaaacctacagtacccaatcagaaatctccttccaaa
catgctacccaatcagctgcgcccatgcagcatctcccaggaacatctgtggcacagcag
acaggtgtgccacctgcagtccaaagcaatccttccgaaccctttatggagaagactacc
caagagaaccctcagagatccccttgtgatccacctgtggagtccagtatcttaaagcaa
gaagggaaagttcccagccgtatagctcttggaagtagagggggctacaatggaagatgc
tggggttcgccagtcagacagaaaaagaaacacacaggaatggcaagcattgacagcagt
gccccggaaaccacctctgacagttcccctaccctcagtcggcgccccctgcgagggggc
tgggcaactacctcctggggccggggacaggacagcgatagcatcagcagttcttccagt
gattccttgggttcctcttcttcgagtggaagtcgaagggccagtggaggggcacgtgca
aagaccgtggaggttgggagatacaagggcaggcgaccggagagccatgccccccacgtc
ccaaatcagccctcggaggcagctgctcacttttattttgagttggccaagacagttctc
attaaggctgggggaaacagcagcacctccattttcacccacccgtcttctagcggtggc
caccaagggcctcatcgtaaccttcacctctgcgcctttgaaattggactctatgcattg
ggactgcacaactttgtctcgccaaactggctctctcggacttattcctcccacgtctct
tggatcacagggcaagccatggagattggcagtgcggccttgaatatcttagtggagtgc
tgggatggtcacctaacccccccagaagtggcatcgttggcggacagagcttcaagagct
cgggattccaatatggttcgatcggccgctgagttggcgttgagttgtttgccacatgca
catgccttgaaccccaatgagatccagagggccctggtccagtgcaaagagcaggataat
ctaatgttggagaaggcttgtctggctgtagaagaggccgccaaaggtggaggagtttat
cctgaagttctgttcgaagttgctcaccagtggtactggttgtatgagcaaactgtcggg
gtaactcttgctcagagggaaggagcaacaggctgcagtgcaaacggagcccgggcgccg
tgcgaaacagtccgtggacaaccagacaccagagtgacatcagaatctgccacagtaacg
gtggctgctgcagtgacggcagcagccacggtagtgcctgtgatctcagtggggtccacc
atataccagcagcacaccgtggcaggaccagcaatggcacacgcgcacacccagggcctg
cacccctacacgacactccagacccacattccttgcaatcctcaatacatcagccatcct
cttcagcacatgccacggccagcagtctttccagtgcccggttctgcttatccacagggt
gtccacccagcgttcatcggggcccagtacccctactcggtaactactccgtctttggcg
gcagccgcagtgtcattcccaggagtcgctgtcccttccatgacgcagattgccatgcac
ccgtaccacgctgagacagggctctctctgtcttccaatgtagcaataggaagcgttcac
gcagggtctactttcccagcaattcaagggacttccttaacaagcttgtcttctcagccc
agctcccttgtgacggggggctttccttctgaagacgaacaacacagccaaccggtcagt
gctcaaggactgcactatcttcattccgcctaccgagttggaatgctggcgttggagatg
cttggtcgccgggctcacaatgaccaccccaacaacttctcacgcagccccccttacaca
gaagatgtgaagtggctcctgggactagcggccaaattaggggtgaactacgtacatcag
ttttgtgtcggtgcagccaagggagtcttgagtccttttgtgctgcaagagatcatcatg
gagtccctgcagagactcaaccctgcccatgtccacaaccacttgcgcacccctgccttt
caccagttggtgcagaggtgccagcaggcgtatattcagtacatccatcatcgtctgatc
catctcactccagcggactacgacgactttgtgaacgccattcgcagcgcccgaagcgcc
ttctgcctgactcctatgggcatgatgcagttcaacgacatccttcagaatctgaaacgc
agcaaacagaccaaggatctgtggcaacgggtctctctggaaatgactacgttttcaccc
tga
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integrated database retrieval system
