Crotalus tigris (Tiger rattlesnake): 120315581
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Entry
120315581 CDS
T08476
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03030
DNA replication
ctig03410
Base excision repair
ctig03420
Nucleotide excision repair
ctig03430
Mismatch repair
ctig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120315581 (POLD1)
03410 Base excision repair
120315581 (POLD1)
03420 Nucleotide excision repair
120315581 (POLD1)
03430 Mismatch repair
120315581 (POLD1)
03440 Homologous recombination
120315581 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctig03032
]
120315581 (POLD1)
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120315581 (POLD1)
Enzymes [BR:
ctig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120315581 (POLD1)
DNA replication proteins [BR:
ctig03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
120315581 (POLD1)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
120315581 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
120315581 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
DNA_pol_B_exo2
divDNApol
Motif
Other DBs
NCBI-GeneID:
120315581
NCBI-ProteinID:
XP_039216097
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MENKRKASMRSTGMGDFIPSQQKRPRGGDWEEDGPSQFEEELAFLDEVEAEVALEMKEAQ
LSSDAIPLGKLFSSVHNPKWQRPLPPKINPKEEGLCFQQVELDYYVGSHISGFPGCTQGS
VPVLRMFGVTAAGNSICCHIHGFAPYFYVPAPPGFQVENLAEFQRELNTAVIRDMRSNKD
GLNQVVLAVEICKKQNMYGFHGPNLLSFLKITMALPRLIAPAKRLLEQGLRCGTLGTHNF
QAFEANIDFEIRFMVDRDIVGCNWIELLAGKYRLRQEESAGESNKENLRKVSLCQLEADV
AWMDFISHPPEGEWQRIAPLRVLSFDIECAGRKGIFPEPEKDPVIQIANMVLRQGEKDPF
VRNVFTLQNCAPIVGSQVLCFPKEDELLKTWAEFIRTVDPDIITGYNIQNFDLPYLLTRA
QTLKVIPFPFLGRILSRKSVIRDSSFQSKQMGRRENKVINLEGRAQFDLLQVLLRDYKLR
SYTLNAVSYHFLQEQKEDVQHSIITDLQNGSDQSRRRLAVYCLKDAYLPLRLLEKLMCVI
NYMEMARVTGVPLGYLLARGQQIKVVSQLLRQAMKQNLVMPVVKTEGGEDYAGATVIEPL
KGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLQQGAVERYGLSPEQFIRTPTGDHFVKSS
VRKGLLPEILENLLAARKRAKLELKQETDPFKRQVLDGRQLALKVSANSVYGFTGAQVGK
LPCLEISQSVTGFGRQMIEKTKQLVESKYTIANGYSADAKVIYGDTDSVMCRLGVESVAE
TMEIGREAAAWVSSHFIPPIKLEFEKVYFPYLLINKKRYAGLYFSSNSDMHDKMDCKGIE
TVRRDNCPLVANLINTCLQKLLIDRDPSGAVTHAKEVISDLLCNRVDISQLVITKELTRT
ADEYAGRQAHVELAERMRRRDPGSAPNLGDRVPYVIISAAKGVAAYMKSEDPIYVLENNL
PIDTQYYLEQQLAKPLLRIFEPILGEGKAQNVLLKGEHTRCKTVLTAKVGGLMAFATKRS
TCIGCRAVLNHHGAVCKFCLDHQSELYQKEVTHLSCLEEKFSRLWTQCQRCQGSLHEDVL
CTSRDCPIFYMRKKVQKDLDDQELLISRFGPPTW
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagaggaaggcttccatgagaagcactggtatgggggactttatcccatca
caacagaaaaggccacgaggaggagattgggaagaagatggtccttcacaatttgaagaa
gaactggcttttctggatgaggtggaggctgaggtggctctagaaatgaaagaagcacaa
ttgtcatctgatgccattccccttggtaaactcttctcatcagtacacaaccccaagtgg
cagaggccactacctcccaaaataaatcccaaagaggaaggcctgtgtttccagcaagta
gaactagactattatgtgggttctcacatctctggattccctggctgcacccaaggttct
gtacctgtcctgcgaatgtttggtgtcactgcagctggcaacagtatctgctgtcatatt
catggttttgcaccttatttttatgtacctgccccacctggattccaagtagagaatctg
gctgaatttcaacgggaactgaatacagctgtaatccgggacatgcggtccaacaaggat
ggtttgaaccaagttgttctagcagtggagatctgcaaaaagcagaacatgtatggcttc
cacgggccaaatctcttatccttcctgaaaattacaatggccctgccccgactaattgct
cctgccaagagattgctggaacaagggctgcggtgtggaacactgggaacacacaatttt
caagcctttgaagccaatattgattttgaaatcagattcatggtagaccgggatattgtt
ggctgtaactggattgaattgcttgctggaaagtatcgcctgcgacaagaagagtctgct
ggagaatctaataaggagaatctacgcaaggtgtcgctctgtcagctggaagctgatgtg
gcttggatggatttcattagccatccacctgagggagaatggcaacggatagctcccctg
cgtgtcctcagttttgatattgaatgtgctggacgtaaaggcatttttcctgaaccagag
aaggacccagtaatccaaattgccaatatggttctacgccagggtgagaaggatcctttt
gtgcgtaatgtcttcacactacaaaactgtgcccctattgtgggctctcaagtgctttgc
tttccaaaggaagatgaacttctcaagacttgggcagaatttatacgaactgtagatccc
gacatcatcaccggctataacatccagaactttgaccttccttatctccttaccagagcc
cagactctcaaggtcatcccatttcccttcttgggccgtattctttcccgcaagtctgtc
atccgtgactcttctttccagtcgaagcagatgggacggagggagaataaagtcattaac
ctggaaggcagagcccaatttgatctacttcaggttctattgagggattacaaattacgc
tcctacaccttgaacgctgtcagctatcacttcctgcaggagcagaaggaagatgtccag
cattccattattacagacctgcagaatggttcagatcagtcacgtcggcgactggctgtg
tactgcctcaaggatgcctacctgccactgcggcttttggagaagctcatgtgtgtcatc
aattacatggagatggcgagagtcactggagtacctcttggctatcttctagcccggggg
caacaaatcaaagtggtatcccaacttctgcgtcaggctatgaagcagaatctggtgatg
ccagtggtgaagacagaaggtggggaggactacgctggtgcaactgtcattgaacctctg
aaaggctattatgatgtgccaattgcaaccttggacttctcctcattgtacccttcaatc
atgatggctcacaatctgtgctatactactcttttacaacagggggcagttgagcgctat
gggctttccccagagcaattcattcgcacccctacgggggaccattttgtgaagtcatct
gttcgtaaaggtcttctgcctgagatcttggagaacttgctggctgctcgtaagagggcc
aagctagaattgaagcaggagactgacccatttaagcgacaggtgctggatggacggcag
ttggctctcaaggtcagcgccaattctgtttatggattcactggggcccaagtaggcaaa
ctaccttgccttgaaatctcacagagtgtgacgggatttgggcgtcagatgattgagaaa
acaaagcaactggtagaatccaagtacactattgccaatggatatagtgctgatgcaaag
gttatatatggagacacagattcagtgatgtgccgcctgggtgtggaatcagttgctgaa
accatggaaataggcagggaagcagcagcctgggtctccagccatttcatcccacccatc
aaattggagtttgagaaggtatattttccatatctcctaatcaataagaagcgctatgct
ggcctgtacttttcctccaactctgacatgcatgacaagatggattgcaagggcattgag
actgtgcgtcgagacaactgccccctggtggcaaacctcatcaacacctgtctacagaag
ctgctcatagatagggacccttctggggctgtaacccatgccaaggaagtgatttcagat
ctgctgtgcaacagagttgacatttcgcagttggtgatcaccaaggaattgacacgcacc
gcagatgaatatgcagggcgccaggctcatgtggaattggccgagaggatgcgtcgacgg
gatcctggcagtgctcccaacttgggagatcgagttccttatgttattatcagcgcagcc
aagggtgttgcagcgtacatgaaatctgaagatcccatctatgtgctggagaacaacttg
cctattgatacccagtactatcttgagcaacaactagctaagcccctcttgcgtatcttt
gagcctatcttgggagagggcaaagctcagaatgttttactgaagggagaacacactcgc
tgcaaaacagtactgacagccaaagttggaggactcatggcttttgcgactaaacgaagc
acctgcattggttgccgggctgtgctcaaccaccacggcgctgtatgcaagttctgcctg
gatcatcagtctgaactttaccagaaagaggtgacccatctaagctgtctggaagaaaag
ttctctcgtttatggacacagtgtcagcgttgccaagggagcttacatgaagatgtactg
tgtaccagtcgtgactgccccatcttttacatgcggaaaaaagttcagaaggatcttgat
gatcaagaattgctgatttcgcgctttggcccccctacttggtga
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integrated database retrieval system
