Crotalus tigris (Tiger rattlesnake): 120315637
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Entry
120315637 CDS
T08476
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04120
Ubiquitin mediated proteolysis
ctig04137
Mitophagy - animal
ctig04144
Endocytosis
ctig04340
Hedgehog signaling pathway
ctig04350
TGF-beta signaling pathway
ctig04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120315637 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120315637 (SMURF1)
04350 TGF-beta signaling pathway
120315637 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120315637 (SMURF1)
04137 Mitophagy - animal
120315637 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
120315637 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120315637 (SMURF1)
04121 Ubiquitin system [BR:
ctig04121
]
120315637 (SMURF1)
03029 Mitochondrial biogenesis [BR:
ctig03029
]
120315637 (SMURF1)
Enzymes [BR:
ctig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120315637 (SMURF1)
Membrane trafficking [BR:
ctig04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
120315637 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
120315637 (SMURF1)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
HECT type E3
120315637 (SMURF1)
Mitochondrial biogenesis [BR:
ctig03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120315637 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
120315637
NCBI-ProteinID:
XP_039216261
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MSNAGTRRAGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCYMEEPA
PYTDSTGAAGGGNCRFAETPGQDQTLQVQRLRGPDVRSHVQTPQNRPHGHQSPSPDLPEG
YEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFV
DHNNRTTQFTDPRLHHIMNHQCQLKESNQPLQAPNEGSLEDSEELPAQRYERDLVQKLKF
LRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVA
REWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGH
YINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGR
ILQHELKPNGRNVSVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFD
HKELELIIGGLDKIDLNDWKANTRLKHCMADSNIVKWFWQAVEAFDEERRARLLQFVTGS
TRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKL
VTAVEETCGFAVE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgcgggcacccgcagggccggctccagcatcaaaatccgcctcacagtgctt
tgtgccaagaatcttgcaaagaaagatttcttcaggcttcctgatccttttgcaaagatt
gtggtggatgggtctggtcagtgtcattccaccgacactgtgaagaacactttagatccc
aaatggaaccagcattacgatttatatgttggaaaatcagattctatcaccatcagtgtc
tggaatcataagaaaattcacaaaaaacagggagctggcttcctgggatgcgtccgactt
ctttccaacgctatcagcaggctaaaagatacgggataccagcgtttggatctatgcaaa
ctaaatcctacagacacagatgcagtccgaggccagatagttgtcagcctacagacacga
gacaggataggcacaggagggtctgtggtagactgcagggggctcttggagaatgaagga
acggtttatgaagactcgggacctgggaggcccctgagctgctacatggaggagccagcc
ccgtatacggacagcacaggagctgctggcggagggaactgtaggttcgcggaaacccct
ggccaggatcagaccctccaggtccagcgattgcggggtcctgatgtaagaagccatgtc
cagaccccccaaaataggccccacggtcatcagtcgccatcacccgatctgcctgaaggc
tacgagcaaaggacaacagtacagggacaagtttactttttgcatacacaaactggggtt
agcacctggcacgatcccaggataccaagagaccttaacagtgtgaattgtgatgagctt
ggacctctgcctccaggctgggaggttagaagtacagtatcgggaagaatatattttgta
gatcataataacagaaccacgcagttcacagacccaagactgcatcacataatgaatcac
caatgccaactaaaagaatccaaccagcctttgcaagcccccaacgagggctcgctggaa
gacagcgaggagctgcccgctcagagatacgaacgggacctggtgcagaagctcaagttc
ctccggcacgaactctccctccagcagccccaggctggccactgccgcatcgaagtatcc
agggaggaaatatttgaggaatcttaccgtcagataatgaagatgaggccaaaagacctg
aagaagaggctgatggtgaaatttcggggagaagaaggcttagattatggtggagtggca
agggaatggctgtaccttctatgccacgaaatgctgaatccatattatgggcttttccaa
tattcaactgataacatttacacgctgcaaataaatcctgattcctccatcaaccccgat
catctgtcttatttccactttgtcggtcggattatggggctggccgtgttccacgggcat
tacatcaatgggggtttcacggtccctttctacaaacagctgctgggcaaacccatccag
ttatctgacttggaatcggttgatccagagctacataagagcttagtctggattttagag
aatgacatcactccagttctggaccataccttctgtgtggaacacaatgcttttggcaga
attctgcaacacgaactcaagccgaatggaagaaatgtttccgttacagaggagaacaag
aaagaatatgtcaggctgtacgtaaactggcggttcatgagaggaattgaagcccaattc
ctggctcttcaaaaaggttttaatgaacttattcctcagcacctcctgaagccttttgac
cacaaggaacttgagctcatcattggtggcctagataagattgatctgaatgactggaaa
gccaacacgcgtctgaagcactgcatggccgacagcaatatcgtcaagtggttctggcaa
gcggtggaagcctttgatgaggaaaggagagcgcggctgctccagtttgtcacgggctcc
acgcgggtcccccttcagggtttcaaggctttgcaaggttctacaggcgcggcaggaccc
aggctgttcactatccacttgatagatgcaaatacagacaacctcccaaaagctcatact
tgctttaatcggattgacattccgccttacgagtcttacgagaagctttatgaaaagcta
gtgaccgccgtggaagagacctgtggctttgcggtagagtga
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integrated database retrieval system
