Crotalus tigris (Tiger rattlesnake): 120315704
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Entry
120315704 CDS
T08476
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120315704 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120315704 (CPSF4)
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120315704 (CPSF4)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120315704 (CPSF4)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120315704 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
120315704
NCBI-ProteinID:
XP_039216423
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MQELIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCDFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKYGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPMGTTEQPP
LPPPTQPQQKQNNTPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNNSIGNRGPRPLE
QVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctgatcgccagcgtggaccacatcaagttcgacttggagatcgcggtggag
cagcagctgggcgcgcagccgctgcccttcccgggcatggacaagtctggtgctgccgtc
tgtgatttttttttaaaggcagcttgtgggaaaggggggatgtgtccgttccgacacatc
agtggtgaaaagacggtagtttgtaaacactggttacgaggcctgtgcaaaaaaggggac
cagtgtgaattcttgcacgagtatgacatgaccaagatgccagaatgttacttctattca
aaatacggggaatgcagcaacaaggagtgtccattcttgcatattgacccagaatctaaa
atcaaagactgcccttggtatgaccgaggtttttgtaaacacggtcctctctgcagacac
agacacacacggcgtgttatttgtgtgaattacctggtaggattctgtccagaaggccct
gcatgcaaattcatgcatcctcggttcgaacttcctatgggaaccacagagcagcctcca
ctgccaccaccgacgcagccacaacagaaacaaaacaacacgccattgcaaaggtcatcc
tctctgatccagctgacgagtcagaactcttctcccaaccaacagagaaccccacaggtc
attggggtcatgcagtcccaaaacaacagcatcgggaacagaggcccacgccccctggag
caagtcacctgttataagtgtggtgaaaaaggacattatgccaacagatgtaccaaagga
catttggccttccttagtgggcaatga
DBGET
integrated database retrieval system
