Crotalus tigris (Tiger rattlesnake): 120315711
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Entry
120315711 CDS
T08476
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120315711 (TMC5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctig02000
]
120315711 (TMC5)
03037 Cilium and associated proteins [BR:
ctig03037
]
120315711 (TMC5)
Transporters [BR:
ctig02000
]
Other transporters
Pores ion channels [TC:
1
]
120315711 (TMC5)
Cilium and associated proteins [BR:
ctig03037
]
Other cilia and associated proteins
Stereociliary proteins
120315711 (TMC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
120315711
NCBI-ProteinID:
XP_039216431
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MSVPYNDIIENPDYHYSETLEIDKLRPSQRSTHRPDNPYAPFGDDDKEGGQGQNSPVLIP
LRLVLSPDETKYPPTDYGFELPRTNPHGKEYVNPSFEYEPELEGILPTTSRAVDIQDADS
YSDASERVNIVQRRSRRHNYATFARPNLLHLDPEYMEAKRKEEEKLINDLSSMSTHERVK
AIQKIPKSMKEKREIRNRVLTEKKKKSYRQDAHLNCCTQCFYNTALSFRQLKSSFVDCLQ
LFRFWQKTLKDIGSQFGTSIHSYFVFLTWLLMFNVFSFLINFSFLAIPQLIAAQPNHLSF
TSLEFLTGAGYFTNTVFYNGFYTNGTIAKIENAAPYYMQLAYIFTIGIYFIICFLSLIYS
MAKSFRNNIVMPQMHSGNAAKLLCIWDFSVMDEKAVQMNQKNICMQIKETLSEMRIESVK
LSLQQRILRFSIHLAFWFLSLGFTVASCAGIYFFSLVNLQLFLNEENTQLENEAAMLILP
IVVSLFNHVMPFLYSFSSLVEKFDYPRHQIYTAIIRNVILKISTIGVLCYYWLNVVALSK
VECWETFIGQDIYRLLIADFVCCLLGSFFGEFVLRLIGTECCKKIGVPEFDIARNVLDLI
YAQTLTWIGIFFAPLLPAIQMITFFIIFCVKKISLLKNCQPPRKAWRGSQMNTIFVFLLF
FPSFTGVLSAVAVTVWRRKPSEACGPFRGLTAPFEAISGWISVLTSSPGSGWVVWIYRNL
IESTHFFFILSIIVLMLIYLFWQIIRGRKTMVKLLQEQIVNAGKDKMFLLKKLRGLQASK
MPSLRRQPERDSSLSQLPKGQSCVLLPSCVEPFLWRESSTEFAGHPVMATFNPEANKITQ
NAGVSDALVLALRARQEAEWEMEDEESLKWK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttccttacaatgacatcattgaaaatcctgactatcactattccgaaaccttg
gaaatcgacaagttaagaccttctcaaagaagtacacaccgtccagacaatccttacgcc
ccctttggggacgacgacaaggaaggaggacaaggacagaattcaccagttctgatacct
ctgagattagtactgagtccagacgagaccaaatatccaccaaccgattatgggtttgaa
ttgcccagaacaaacccacatggaaaggaatatgttaatccttcttttgagtatgaacca
gaacttgaagggatattacctactaccagccgtgctgtcgatattcaggatgcagacagt
tattcagatgcatcagagagagttaatattgtccagaggcgtagcaggcgacacaattat
gcaacttttgcaaggcccaacttgcttcatttagacccagaatatatggaagcaaagagg
aaagaagaagaaaaattaatcaacgatctgtcaagcatgtccacccatgaaagagttaaa
gcaatccagaagattcccaaatcaatgaaagaaaaacgtgaaattaggaaccgtgtccta
acggaaaaaaaaaagaaatcctacagacaggatgctcatctgaattgttgtacccagtgc
ttttacaacacggctttgtccttccggcagttaaagagcagctttgtcgactgccttcag
ctcttccggttttggcagaaaacgctcaaagacattggcagccaatttgggaccagcatc
cattcctactttgtcttcctgacgtggcttctcatgttcaacgttttctcattcctgatc
aacttcagttttcttgccatccctcaactcatcgcagcccagccaaatcacctttccttc
acgagtctggagtttttgaccggagctggttattttacaaacacggtgttctacaatggc
ttttacaccaacggcacaatagcaaaaattgagaacgccgcgccatattacatgcaactg
gcttacattttcacaatcgggatttattttatcatctgctttctgagcttgatctacagc
atggcaaaatccttccgtaacaacattgtgatgcctcaaatgcactcgggcaacgctgcc
aagcttctttgcatctgggacttcagtgtgatggacgagaaagctgtccagatgaatcag
aaaaatatctgcatgcagatcaaggagaccctttctgaaatgcgtattgaatctgtgaag
ctatctctgcagcaaaggattcttcgcttctcgattcacctggccttctggtttctctcg
ctgggcttcacggtggcttcgtgtgctggcatttacttcttttcccttgtgaatttacag
ttatttctgaatgaggaaaacacccagcttgaaaacgaagctgccatgttgatcttgcct
atcgtggtgagcctcttcaaccacgtgatgccattcctgtactccttctccagcttggtt
gaaaagtttgactatcctaggcaccagatctacactgctattatcaggaatgtcatcttg
aaaatatccaccattggagtcctctgctactactggctcaacgtagtagctctctccaaa
gtggagtgctgggaaaccttcattggccaagatatatacaggctgcttatagcagacttt
gtctgctgcctcctgggttcattcttcggtgaatttgtactacgacttattggcaccgaa
tgctgtaaaaaaattggcgtgccagaattcgacattgctcgaaacgttttggatttgatc
tacgctcagactttgacatggattgggatcttctttgctcctctgcttccagccattcag
atgataacatttttcatcatattttgtgtgaaaaagatcagcctgctgaagaactgccag
ccgccccgcaaagcttggcgagggtcccaaatgaacaccatttttgtcttcctcctcttt
ttcccctctttcaccggagtcctctcggccgtcgcggtcactgtctggagacggaaacct
tccgaagcgtgtggccctttccgaggtctgacagctcccttcgaagctatctctggctgg
atttcagtcttgacttcttcaccgggctcaggatgggtagtgtggatctaccgcaactta
atcgagagcacacacttcttcttcatcctttcaattattgtgttgatgctcatatacctt
ttctggcaaatcatccgtggacgaaaaacaatggttaaactgctacaagagcaaattgtt
aacgccggcaaagataaaatgtttctactgaagaaattacgtggactgcaagcttctaag
atgccctctttgagaaggcagccagagagggactcctctctcagccagctgcctaagggg
caaagctgtgttttgctgcccagctgcgtggagccctttctctggagagaatcttctact
gagtttgctggacaccctgtgatggctacctttaatcctgaggctaacaaaataacccag
aatgctggagtatctgacgccctggttttggctttgagagcaagacaagaagctgaatgg
gaaatggaagatgaagaaagcttgaagtggaagtag
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integrated database retrieval system
