Crotalus tigris (Tiger rattlesnake): 120315791
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Entry
120315791 CDS
T08476
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctig03037
]
120315791 (IFT140)
Cilium and associated proteins [BR:
ctig03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
120315791 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
TPR_IFT80_172
Beta-prop_WDR75_1st
WD40_Prp19
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
TPR_GEMI5
Beta-prop_WDR35_TULP_N
TPR_COPA_B
RNase_HII
Clathrin
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
120315791
NCBI-ProteinID:
XP_039216654
LinkDB
All DBs
Position
Unknown
AA seq
1491 aa
AA seq
DB search
MSVAGRSPLPRATRSLSLNRPSRPRSGPGRAASRHLTMAVYIDHRIEALESCGPHTHIRW
HRLQPLLAVASINANSGGSVDIFQEQGEYVGDAHLERNFRVTYLSWHPSKLIVAVGCEMG
DVVVVNKQDKEHHAVPSNHNADISILNWSTNGTRLVSGDKLGVLVLWRMDQRGRVQGPPL
LKHEYGKHLNFCIFRPPPPGEDLVQLAKAAVSGDEKALDMFNWRKSGMGLPLKMGPQEGL
SFFVSVIDGTVHYVSDRGKTSQALIIETSVQKMLFMERDVLVVITEALLLSLHKMSPEGE
AEELLKVKLSGKMSHPADIILIDHSLLITATGEPLLRFWDLERGENYVLSLDEQLGFEIG
ESVHCVSYCNAKGLLAAGTDKGRIAMWRKVPFSSQTTWSLEGKDRWKLQTPTELEGSIIQ
IEWSSKKNLLAVNLTNSVAILREQAMASHFHQQMAVVQVSPNLFNITSFSSKMMDNLRID
MHVNGVWATKDAVAFWNGKQISIFELSAATLRNSGFFLCESPVLAMHEENLYTVEPNRVQ
VRTWQGTVKQLLSFSESEGSPCFLDVCGNYLTVGTDLSHFKIFDLSRREAKVHCNSKALA
DLIPGTLGIASVKCNASGNRVSLLLSKADGSLDPRICFYDIEMDTITLFDFESGRQRDAK
EILSFGQETEKKNASVYPMLCNRIPASHFWDQNEPRLFVCEAVLDPNQQSLDKKQESSEN
AMDVLIVSFFSTEEHGLLLQDSFPLPSTYQSLLGMEVPHYYFAKKPEAEKKDEAEPGRVP
LHQMVARRPMRDFIGLEECDKMTCEAMLNFSFYLTIGDMDEAFKSIKLIKSEAVWENMAR
MCVKTQRLDVAKVCLGNMGHAQGAKALREAEQEPEQEARVAMLAVQLGMLEDAEQLYKQC
KRYDLLNKFYQASDQWQKAIEVAETQDRVHLRTTYYNYAKHLEAIAERNFAITYYEKSDT
HKFEVPRMLSEDLQALEAYVNRMKDKGLWKWWAQYLEGQADLEAAFKYYELAQDYFSMVR
IHCFLGNIQKAAEIANATGNWAASYHVARQYESHEDIKQAVHFYTRAQAFNNAIRLCKEN
QLDDLLMNLALLSSPEDMIEAARYYEGRGEQMDQAVTLYHKAGHLSKALELAFATQQFAA
LQLVAEDLDEKSDPALLARCSDFFIEHAQYEKAVKLLLAAKKYQDALQLCLTQNLTITEE
MAEKMTISKDSKHLSEDSRRELLEQIADCCMRQGNYHMATKKYTQAGNKLKAMRALLKSG
DTEKIVFFAGVSRQREIYIMAANYLQTLDCRKDPEIMKNIISFYTKGRALDLLAGFYDSC
AQVEVDEFQNYEKALGALTEAYKCMSKAKTRSPTEQENKLAHLQTKMALVKRFIQARRLY
SEDPKEAIRQCELLLGEPDLETTVRLGDVLGLLVEHHLQMQEFQTAYRYLEEMRKKIPCV
NLNYYVTQQTVEAVHRGLGIPLSRNTAPERVRHNSVEDKEIEEVADEAEPS
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcggggcgctcgccgttgccaagggcaacgcgaagcctctccttgaatcgg
cccagcaggcctcgatcggggccgggccgggccgcgagcaggcatctgactatggcggtc
tacattgatcatcgaatagaagcacttgagtcctgtggaccccacacccacatcagatgg
caccgtcttcagccacttttggctgttgcatccattaatgcaaactctggcggtagcgtg
gatatttttcaagaacagggagagtatgtgggtgacgcacatttggaaagaaactttcgg
gtcacatatctcagttggcacccctccaaactgattgtggccgtgggttgcgagatggga
gatgtggtagtagtgaacaaacaagacaaggagcatcatgctgtgccctccaaccataat
gctgatatttccatcctgaactggagtaccaatggaacacgtcttgtttctggagataaa
ctgggcgttctcgtcttgtggcggatggatcagcgggggagagtccaaggtccccctttg
ttaaaacacgagtatggaaaacaccttaatttctgcatttttcgcccacctcctcctgga
gaagatttggtccagctcgccaaagctgcagtgagcggtgatgagaaggccctggatatg
tttaactggaggaaatctggaatggggctgcctctcaaaatgggaccccaggaaggcctg
tccttcttcgttagcgtgattgacggaactgtgcattatgtgagtgacagaggaaagacc
agccaagcattgattatcgaaacttcagtccaaaaaatgttgttcatggaaagagacgtc
ttagtagtaataacggaggctctcctcttatcccttcacaaaatgtctcctgaaggagaa
gcagaagaacttctgaaggtcaagttgagtggaaagatgagtcatcctgctgatatcatt
ttgattgatcatagcctccttatcactgcgacaggtgaaccccttctcaggttctgggat
ttggaacggggtgagaattacgtcctttctctggatgaacagctaggctttgaaatcgga
gaaagtgtccattgtgtgtcatattgcaatgccaaaggtcttctagcggctggcactgac
aaagggcgaatagctatgtggaggaaagtgccgttctccagccagaccacctggtccctg
gaaggcaaggacagatggaaacttcagacacccactgagcttgaggggagcatcattcaa
atcgagtggagttcaaaaaagaatctgctggcagtgaacttgaccaattcagtagccatc
ctaagagagcaagccatggcttcccacttccaccagcaaatggcagtggtccaggtttcc
cccaacttgttcaacatcaccagcttcagcagcaaaatgatggataacctccgtatcgat
atgcacgtgaacggggtgtgggcaaccaaggacgctgtagcattctggaatggaaagcaa
atttctatctttgaactctcggctgccactttacggaattcaggttttttcctctgtgaa
tcccctgtgctggcgatgcatgaagagaacctttacaccgttgagccgaatcgggtgcaa
gttcgcacctggcagggcaccgttaagcagctgctgtccttctccgaatctgaaggcagt
ccctgctttctggacgtctgcgggaattacttgacggtggggaccgacctgtctcacttt
aaaatcttcgatctttctcgcagagaggcaaaggtgcactgcaatagcaaggccttggct
gatctaattccaggcactctcgggatcgcgtcggtgaagtgcaacgcaagcggcaacaga
gtgagccttctgctgagcaaggctgatggcagtcttgaccctaggatttgtttctacgac
attgaaatggacaccatcaccctgtttgattttgagtcaggtcgacaaagagatgctaag
gaaatcctctcctttggacaagagaccgaaaagaaaaacgcctctgtctatccaatgcta
tgtaaccgaatccctgccagtcacttctgggatcagaacgaaccaaggctgtttgtgtgt
gaagcagttcttgaccctaatcagcaatcattggataagaagcaagaatcgtcagaaaat
gccatggatgtgctgatagtatctttcttcagcaccgaagagcatggccttctgctccaa
gacagttttccgttgccatccacctaccagtctctcctgggcatggaggtgccacactat
tactttgccaaaaagccggaagctgaaaaaaaggatgaggcagaacccggcagggttccg
ctgcatcagatggtagctagaagaccgatgagagatttcattgggctggaagagtgtgac
aagatgacttgcgaagctatgcttaacttcagcttctacctaaccattggagacatggat
gaggccttcaagtctatcaaactcatcaaaagtgaagccgtctgggagaacatggcccgc
atgtgcgtgaagacccaaaggctggacgttgccaaagtctgcctggggaacatgggccat
gcacagggagccaaggcgttgcgggaggctgaacaagaaccggagcaggaagccagggtg
gccatgttagccgtccagctgggcatgttggaggatgccgagcagttatacaagcagtgc
aaacgctacgatcttctgaacaagttctaccaggcttcagaccaatggcagaaagccatc
gaggtagccgagacccaggaccgcgtgcacctgcgcacgacttactacaattatgccaag
cacctggaagccatagccgagcgcaactttgccatcacctactacgagaagtccgacact
cataagtttgaagtgcctcgtatgctttccgaggatctgcaagccttggaggcttacgtc
aacaggatgaaagataaaggtttgtggaaatggtgggctcagtatctagaaggccaggca
gacctagaagcggctttcaaatattatgagctggctcaagattatttttccatggtccgt
atccattgcttcctgggtaacatccagaaggccgctgaaatagccaatgcgaccggcaac
tgggcagcttcgtatcacgtggcccgtcagtatgagagccacgaggacatcaaacaggct
gtgcacttctacacccgggctcaagcatttaacaacgcgattcgtttgtgtaaggaaaac
cagctggatgatctgttgatgaacctggctcttcttagttccccagaagacatgatagaa
gctgcccgctactatgaaggacgaggagaacaaatggaccaagcggtgacgctctaccat
aaggccggacacttgtccaaggctctggagctggcctttgccacccagcagtttgcagcc
ttgcagctggtggcagaagacctggatgagaagtccgacccggccctgctggctcgctgc
tccgacttcttcatcgagcatgctcagtacgagaaggccgtcaagcttttgctagcggcc
aaaaagtatcaggacgccctgcagctttgcctgacgcagaatctgaccatcactgaggag
atggcggagaagatgaccatctctaaggactccaagcacctttccgaggattcccggcgg
gagctcctggagcagatcgctgactgctgtatgaggcagggcaattaccacatggccacc
aagaaatacacccaagcaggaaacaagctgaaggccatgagggctctgctgaaatctggc
gacacggaaaagattgtgttctttgctggcgtctcgagacaaagggagatttatatcatg
gcggccaattacctgcaaaccctggactgtcgcaaagatccagagatcatgaagaacatc
atcagcttctacaccaaaggaagggctctggacctcttggctggcttttatgactcctgt
gcgcaggtggaggtggacgagttccagaactacgagaaggccttgggagccctgaccgag
gcctacaagtgtatgtccaaggcaaagacacggagcccaactgagcaagagaacaagctg
gcacacctacagaccaagatggccctggtgaagaggtttattcaagcccgaagactttac
tccgaggaccccaaagaggccatcaggcagtgtgagctgctcctgggagaacctgacctt
gaaaccaccgtccgcctgggggatgttctgggattgctggtggagcatcatttgcagatg
caagaattccagacggcctaccggtacctggaagaaatgcggaagaaaattccctgcgtg
aatctcaactactacgtgacccagcagacggtcgaggccgtgcaccgagggctgggcatc
cccctcagccgaaacaccgctccagagagagttcgccacaacagcgtggaggacaaggag
atcgaagaagtggccgatgaagcagagccctcctga
DBGET
integrated database retrieval system
