Crotalus tigris (Tiger rattlesnake): 120316061
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Entry
120316061 CDS
T08476
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120316061 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120316061 (SMARCD2)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120316061 (SMARCD2)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120316061 (SMARCD2)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120316061 (SMARCD2)
PBAF complex
120316061 (SMARCD2)
GBAF(ncBAF) complex
120316061 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
120316061
NCBI-ProteinID:
XP_039217168
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MAGRGGFPLIPPPPEGPSAAISVAAGVPSPAVPAPGSGLLRGPSPAGAGSYRPMGHGAQF
QRPGMLPSGRMPMAGLQVGSPSGSPYGTTSSMRPGMPPSLMDPFRKRLLVPQAQPPPALT
QRRGLKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQ
KRKLRIYISNTFTPGKEESEGGERIASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDK
ELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLG
VHTQTRASIMQALWLYIKYNKLQDCHEKEYINCNRYFRQIFNCSRMRFSEIPMKLAGLLQ
HPDPIVINHIISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDIKIHE
TIESINQLKTQRDFMLSFSNNPQDFIQEWIRSQQRDLKIITDVAGNPEEERRADFYQQPW
MQEAVGRHIFAKVQQRRQELEQVLGVRLT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccggacgcggcgggtttcccctgattccgccgcccccggagggaccatcggcggct
atctcagtggcagcgggcgtcccttcgcctgctgtcccagcaccgggaagcgggcttttg
cgaggacccagtcctgctggggctggatcatatcggcccatgggccacggagctcagttc
caacgccctggaatgctgcctagtggaaggatgcctatggcaggattacaagtgggatca
ccttcaggctctccatatggtacaacttcttccatgagacctggaatgccaccatccctg
atggatcccttccgaaagcgtctacttgttcctcaggcacagccgcctccagcacttaca
caaaggcgaggattgaaaaggcgaaagatggctgacaaaatcctgccacagaggattcgt
gaactagtccccgagtctcaggcttacatggacttactggcttttgaacgcaagctggac
cagacaattgcccgcaaaagaatggaaatccaagaggcaatcaagaaacctttgacgcaa
aagcggaagctgcgcatttacatctctaatacttttactcctggcaaagaggagtctgag
ggtggtgagcgtatagcctcgtgggaacttcgtgtggaaggcaaacttcttgatgatcca
agtaaacagaagagaaaattttcatcctttttcaagagcttggttattgaattagacaaa
gaattatatggaccagacaatcacctggtggagtggcaccggatgccaacaacccaagag
acagatggctttcaagtcaagcgccctggtgatgtgaatgtaaaatgcactctgcttctc
atgctggatcatcagcctcctcaatacaagctagacccacgtttggctcgcttgcttggt
gtccacacccagactcgtgccagcataatgcaggccctatggctctatatcaaatataac
aaacttcaggactgtcatgagaaagaatatatcaattgcaaccgctattttcgtcagatc
ttcaactgcagccgtatgagattttctgagattccaatgaaactggcaggactcttacaa
catccagatcccattgttatcaatcacattatcagcgtggaccctaatgatcaaaagaaa
acagcctgttatgacattgacgtggaagtagatgaccctttgaaagcccaaatgagcaac
ttcttggcctccaccactaatcagcaagaaattgcttccctggatatcaagattcatgaa
acaattgaatctattaatcagctgaagacacaacgagattttatgctgagttttagtaat
aatcctcaggattttattcaggagtggatcagatctcaacagagggatttgaagattatt
acagatgtggctgggaacccagaagaagagagacgggctgatttctatcagcaaccatgg
atgcaagaagctgttggacgacacatctttgcaaaggttcagcagcgcagacaagaactg
gaacaagtgcttggtgttcgccttacttag
DBGET
integrated database retrieval system
