Crotalus tigris (Tiger rattlesnake): 120316192
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Entry
120316192 CDS
T08476
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120316192 (HTT)
04131 Membrane trafficking [BR:
ctig04131
]
120316192 (HTT)
03029 Mitochondrial biogenesis [BR:
ctig03029
]
120316192 (HTT)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120316192 (HTT)
Membrane trafficking [BR:
ctig04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120316192 (HTT)
Mitochondrial biogenesis [BR:
ctig03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120316192 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_2
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
120316192
NCBI-ProteinID:
XP_039217434
LinkDB
All DBs
Position
Unknown
AA seq
3093 aa
AA seq
DB search
MAAMEKLMRAFEALRSFQQQPPPPPPPSPAAPAPEEPPARPKKELSTSKKDRVNHCLTIC
ENIVAQSLRNSPEFPKLLGIAMELFLLCSDDAESDVRMVADECLNKVIKALMDSSLPRLQ
LELYKEIKKNGASRSLRAALWRFAELAHLVRPQKCRPYFVNLLPCLTRVSRRPEDSVQET
LAAAMPKIMAAFGNFANDGDIKVLLKAFIGNLNSNSPTIRRTAAAATVSICQHSRRTQYF
YTRLLQVLLGLLCPKEEEHPSVLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVIQKETEI
SPSLDQLIEVYELSLQYTQHRDHNVVTGSLELLQQLLRTPPPNLLLVLTMRGGLLQASAA
EDEIVSRSRSDSIVELIAGGGSSCSPVFSRKQKAKVLSGEEEGLEEDTEARSETSQMDFA
GSVKSELSSELAPTSGLATAAVSASDPPACDIITEQPRSQHVLQSESELPACDPTGAAPR
ADADDEILSRSSSQISTIQSDMNDGTSSPISDSSQTTTEGPDSAVTPSDFSEMILEGGEN
QYSGMQIGQLQDEEEEATSDLHNEALDPSRNSCLELQRSHLAKSVSHSREPSNGSVEKFA
PKEEAELADHGNKLSRIKGDIGGYQDGSAAPLVHCVRLLSASFLLTGEKGALVPDKEVRV
SVKALAISCVGAAVALHPEAFFSKLFKMPAESAKEEREEQYVKDIVNYIDHGDPQIRGTT
AILCGTIIYSILVQSCFSVESWLENIKASPGTLVDCISLLQKTLKDESSVTCKLACIAVR
HCIMSLCGSSHSSLGLQLLVDLLLLRNCSYWLVRTELLETVAEIDFRLIQFLEERDSNLH
RGDHHYTGLLKLQERVLKEVVISLLGDKDPRVRRVAAAALVRLVPKLFYSCDGGQADPVV
ALAKEQSSVYLKLLMHETPPASQFAVSTITRTYRGYNLMQSPADVMVENNLSRVISAVSH
ALTTSPSRSLTFGCCEALCLLSSSFPVCTWNVGWHCGFFLLGGVEEPQEKSTIGMVGLLL
SLLSSVSFPLDLSAHQDALVLAGNLLAASASKSLQNPWTHSEDEASVAAVKQEDSWAALA
DQTLALMVDHLFSHLLKVINICSHILDDAIPGPTLKATLPSLTNPPSLSPIRRKGKEKDV
AEQATVAISPKKTSENSPAPRQSDIPSSAPPSKSSSTLGNFYHLPSYLKLYDVLKATYAN
YKVTLDLQNVSEKFGAFLRSALDVLSQILELATLQDIGKYVEEILCYLKSCFNKEPVMAT
VCVQQLLKTLFGTNLASQFDSWSSNSCRAQGKCQRLGSSNLRPGLYHCCFMAPYTQFTQA
LADASLRNMMQAEQERDTSGWFDILQKVSAQLKTGTTNMAKHRADKNIIHNHIRLFEPLV
IKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRE
SEAIIPSVFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDL
FILRGANKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHRENEEKWKRLSRQ
VADIILPMLAKQQMQIDSHEALGILNTLFEILAPSALRPVDMLLRSMFVTPSTMASVSTV
QLWVSGILAILRVLISQSTEDIVLSRIQELSFSPRLISCQTIHRLRNGGNRIPATQETAP
EEHDRFLPEETFSRFLMQLVGILLEDITSKQFHVEMSEQQHTFYCQELGTLLICLIHTFK
SGMFRRITAAATKLFTGNGAHSLHFYTLERLNDLVKSMIATHPSLVLLWCQILLLVNYTD
SCWWSKVHQTPKRQSLSSAKLLSPQACGGPRAEDGSAKLSICNREIVRRGSLILFCDYVC
QNLHDSEHLTWLTVNHVQELISLSHEPPVQDFISAIHRNSAASGLFIQAIQSRCENFASP
TAVKKTLQCLEGIHLSQSGAVLVLYVDKLLSTPFRVLAHMVDTLACRRVEMLLAASVQNS
TAQLPVEELDRIQEYLQNTGLAHRHQRLYSLLDRFRLTVAPETISPSPLVTAHPLDGGNH
PALETLIPDKDWYCSLVRSQCYTKSAFALPEGAELMNRLPEQELVPFMMHQDFNIGLLAP
CLSLAGQELSRGMRGHFEAARLVTLHQVTEVVRKLPANHQVFQPMRPMGSSPYWNKLGNI
YGDPEIFQFTMVLAQALSQYLVLLSKLPASLRIPREKESDIVKFVVMLLEMLSWHLICKQ
VPLSIDLQAVLECCCLALQQTELWNLWATTEYTSHSCSLIHCTRFILEAVAIEPGNRLLS
PDKGKTIQKATSENDGRSSETPNSEYITATCEVVAELVECLQSVLALGHKENRPIPAFLT
PVLKNIIISLSRLPLVNSYARVPFLVWKLGWSPKPTGEFSTTFPEIPVEFFQEREIFKEF
IYRINTLGWTNRMQFEETWATLLGVLVTQPITMDPEDNQQEEDMERTQINVLAVQAITSL
VLSAMTIPLAGNPAVSCLEQQPRNKTLKALDTRFGRKLNIIRGTIEQEIQELASKRDNVA
CHHLYQVWDPVPSLAPSTTGALISHEKLLLQINTEREMGNMGYKLGQVSIHSVWLGNSIT
PLREEEWGDDEDDESDMPVLSSPPSSPMNSRKHRAGVDIHSCSQFLLELYSQWILPSSES
KRTPVTLISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILLQYLVPALCKA
AAVLGMDKAVAEPVSRLLESTLRSAHMPSRIGALHGILYILECDLLDDTAKQLVPVITDY
LLSNLRGVAHCVNLHNQQHILVMCAVAFYLIENYPADVGPEFSSGIIQMCGVMLSENEGS
TPSLIYHCVLRGLERLLLSEQLSQLDCEALVKLSVDRVNVLSPHRAMAALGLMLSCMYTG
KEKVSPGRSADHHPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVTRILPQFLDDFFP
PQDVMNKVIGEFLSNQQPYPQFMAKVLYKVFQTLHTTGQSSMVRDWVMLSLSNFTQRTPI
AMAMWSLSCFFVSASTSQWISGILPHIISRMGKSEQIDVKLFCLVAIDFYRHQIDEELDR
RAFQSIFEVVSSPGNPYHHLLTCLQSIHKITPC
NT seq
9282 nt
NT seq
+upstream
nt +downstream
nt
atggccgccatggagaagctgatgcgggccttcgaggcgctgcgctccttccagcagcag
ccgccgccgccgccgccgcccagccccgccgcccccgcgcccgaggagccgcccgcccgc
ccaaagaaggaattgtccacatccaagaaagaccgagtcaatcattgcctgacaatatgt
gaaaacatcgttgctcagagtttaaggaattctccggagtttccaaagttgttggggatc
gccatggaactcttccttctgtgcagcgacgatgcagagtctgatgtcaggatggtcgcc
gacgagtgtctcaataaagtgataaaagcgctgatggattctagtctccctcggctacaa
ttggaactctacaaagagattaaaaaaaacggtgcttcccggagtctgcgggctgctctg
tggagatttgctgagcttgcacatcttgtgagacctcagaaatgcaggccgtactttgtg
aacctcctgccctgcttaacccgggtcagcaggcggcccgaagactccgtgcaggaaacc
ttggcggcggcgatgcccaaaatcatggcagcttttggaaattttgcgaacgacggcgac
atcaaggttttattgaaagctttcataggtaatcttaactccaactctcccaccatccgt
cggacggcggctgcagccacggtgagcatctgtcagcattcacgaaggacacagtatttt
tacacccggttgcttcaggtgttgctagggctgctgtgtcccaaggaagaagagcatccc
agcgtcttgatcctcggggtgttgctcaccctgaggtacctgatcccattgctgcaacag
caggtgaaagacaccagcctgaaaggcagcttcggggtgatacagaaggaaaccgagatc
tcgccttccttggaccaactcatagaggtgtatgaactgagtctccagtacacccagcac
cgggatcacaacgttgtgaccggatccctggagctgttgcagcaactcctcaggacgcct
ccccccaacctcctcttggtcctcacgatgcgtggggggcttttgcaagccagcgcagcc
gaagacgagattgtgagcagaagccgcagtgacagcatcgtggaactgatagctggaggg
gggtcttcctgcagccctgttttttccagaaaacaaaaagctaaagtcctatcaggagaa
gaagaaggtctggaagaagatactgaagccagatctgaaaccagccaaatggactttgca
gggtctgtgaaaagcgagctcagcagcgaattggctcccacctcgggcctggcgacagca
gccgtctcggcctccgatcctccggcttgcgacatcatcacggaacagccccgttctcag
cacgtcctgcagtccgagtcggagctcccggcatgcgatccgacaggcgcggccccaaga
gccgatgccgacgacgagatcctgagccggagttccagccagatcagcaccatccagtcg
gacatgaacgacggcacctcgtcgcccatcagcgacagctcccagaccaccaccgaaggg
ccggactcggcggtgaccccctccgatttctccgaaatgattctggagggtggcgagaat
cagtactccggaatgcagatcggtcaactgcaggacgaagaagaagaagcgacaagcgat
ctacacaacgaggccctggatccttcccgaaattcttgcctcgagcttcagcgatctcat
ttagcgaaaagcgtgagccacagccgggagccttcaaatggcagcgtggagaagtttgcg
ccgaaggaagaagctgaactggctgaccacggaaataagctctccagaattaaaggcgat
atcgggggctaccaggatggaagcgctgctccattagtccattgtgttcgcctcctgtca
gcctcttttctgctcacaggagagaaaggggctctggtgccggataaagaagtccgggtc
agcgtgaaagccttggccatcagctgtgtgggggcagcagtggcccttcacccggaagct
ttcttcagcaaactgttcaaaatgcccgctgagagtgccaaagaggaaagggaagagcag
tacgtgaaggacattgtgaattatatcgaccatggtgatccacagatcagaggcaccact
gcgattttatgcgggactattatttactccatcctggtccagtcttgcttcagtgtggag
agctggctagaaaatataaaagcatccccaggtacgctggtggactgtatctccttgctc
caaaagaccctgaaagacgagtcttcggtcacgtgcaaattggcctgcatagctgtgagg
cattgtatcatgagcttgtgtggcagcagccatagttccttggggctgcaattactggtt
gacctcctgctgctaagaaactgttcctattggctggttaggacggagcttctggaaacg
gtggctgaaatagattttcggctgatccaatttttggaagagagggacagcaacctgcat
agaggggatcatcattatactgggctgttaaaacttcaggagcgggttctgaaggaagtg
gtcatttctctcctgggggacaaagaccccagggtcaggcgcgtggcagcggctgcttta
gtaaggctggttccaaaactgttctacagttgcgacggagggcaggctgacccagtcgta
gctctggcgaaggagcagagcagcgtctacctgaaactcttgatgcacgaaacgccacca
gcttcccagtttgccgtgagcaccatcaccagaacatacagaggatacaatctgatgcaa
agtccagcagatgtcatggtggagaacaatctttccagagtgatctcggcggtgtcccac
gccttgacaacgtccccttcacggtctctgacgtttggctgctgcgaagcgttgtgtctt
ttgtcctcgtcgtttccggtttgcacctggaacgtgggatggcattgtggtttttttctc
ctgggaggcgtggaggagcctcaggagaagagcacaattgggatggtgggcttgctgttg
tccctcctttcctccgtttcgttccctctggatctctctgctcaccaagatgctttggtc
ctggctgggaacttgctggcagccagcgcctccaaatctctgcaaaacccctggacgcac
agcgaggacgaagcgagcgttgcggccgttaagcaggaggactcgtgggcggccttagct
gaccagacgctggccctgatggtggaccacctcttttcccatttgctgaaggtcatcaac
atttgctcccacatcctggacgatgccattcccggcccgacactaaaggccacgttaccg
tctctaaccaacccaccttcgctgagtccaatccgtcgcaaagggaaagagaaagatgtt
gcagaacaagccacggtagccataagccctaaaaagacgagtgaaaacagcccagctccc
aggcaaagtgacattcccagctcggctcctccaagtaaatcatcctcaacgttgggtaac
ttctatcatctcccatcgtatctcaagctctacgacgtcctgaaggccacctacgccaac
tataaggtcacactcgatctccaaaacgtcagtgaaaagtttggtgctttcctgagatca
gctttggacgttctctctcaaatcttagaactggcaactctacaagacattggaaagtat
gtcgaagaaattctgtgttacctgaaatcctgtttcaacaaagaaccggtcatggcaacg
gtgtgcgttcagcagttactgaagaccttgtttggcaccaacctggcctctcagtttgac
agctggtcttccaactcttgccgagcccaaggcaaatgccagcgcctgggctcctccaac
ttaaggccgggcctttaccactgctgcttcatggctccttacacccagttcacccaggct
ctcgccgatgccagtttgcggaacatgatgcaggccgagcaggaacgcgacacctcgggc
tggtttgacatcttgcaaaaagtttctgcgcaactgaaaactggcaccacaaatatggcc
aagcaccgggctgacaagaatatcatccacaaccacatccgtctctttgaaccgcttgtc
atcaaagcactcaagcagtacaccaccaccacgtcggtgcaactgcagcgacaagtcttg
gaccttctcgctcagctcgttcaactgcgggtcaactactgtctcctggactctgaccaa
gtttttattggatttgttctaaagcagtttgaatacattgaagtcggccagttcagggaa
tcggaagccatcattcccagcgtctttttcttcctggtgctgttgtcttatgagcgctac
cactccaagcagatcattggaattcctaaaattattcagctgtgcgacgggatcatggcc
agcggaaggaaagccgtgacacacgcaatcccggctctgcagcccatcgtccacgacctc
ttcatcttaagaggagcaaataaagccgatgccggcaaagaactggaaacccaaaaggaa
gtggtggtctccatgttgctgaggctgatccagtatcatcaggtgctggagatgtttatc
ctggtgctgcaacagtgtcaccgagagaacgaagagaagtggaagaggctgtcgcgacag
gtagcagacatcatcctgccaatgctggccaaacaacagatgcagatcgattcccacgaa
gctctggggatactgaacactctgtttgagatcctggccccgtccgccctgcggccggtg
gacatgctcttgcgaagcatgttcgtcacgcccagcacgatggcttccgtgagcaccgtc
cagttatgggtctccggcattctggccatcctgcgggtcctgatttcccagtccacggaa
gacatcgtcctttcccgcatccaggagctctccttttccccccgtctcatctcctgccag
acgattcaccggctgagaaacggggggaacagaatccctgcaacgcaggagaccgccccg
gaggagcacgaccgcttcctgcccgaagagaccttttccagattcctaatgcagctggtg
ggaatcctcttggaagacatcacaagcaaacagtttcacgtggagatgagcgaacagcaa
cacaccttctactgccaggaactgggcacccttctcatctgcttaattcataccttcaaa
tcaggaatgttccgaagaatcacagctgcagctaccaagctttttacagggaacggagcc
cacagtctccatttctacaccctggagagattaaacgacctcgtcaagtccatgatagcc
acccacccatcgctggtccttctctggtgtcagatcttgctgcttgtgaattacaccgac
tcctgctggtggtccaaagttcatcagactcccaaacggcagagcctatcaagtgctaaa
ttgctcagccctcaagcctgcgggggtccccgcgcagaagatgggagcgccaaacttagc
atctgcaaccgagagatcgtacggaggggatccctcatcctgttttgtgactatgtgtgc
caaaacctgcacgactccgagcacttaacctggctgaccgtgaatcacgtccaggaactg
atcagtctgtctcacgaaccccctgtccaggattttataagcgccattcacagaaactcg
gccgccagcgggcttttcatccaggctatccagtcacgatgtgagaacttcgcctctccg
acagcagtaaagaagaccctgcagtgtttggagggcatccatctcagccagtcgggggcc
gtgctggtcttgtacgtggacaagcttctctccactcccttccgtgtgctggcccacatg
gtggacaccttggcctgccgtcgcgtggaaatgcttttagcggcgtctgtgcagaacagc
acggctcagttgccagttgaggagctggaccgaatacaggaatatcttcagaacactgga
ttagcccaccggcatcaaagactctactccctgttggatcggtttcgtctaacggtggct
ccggaaaccattagcccctcgcctttggttacggcacatcccctggatggggggaaccat
cccgctctagaaactttaattccagacaaagattggtactgttcgctggtgaggtcccag
tgctacaccaaatcagctttcgctctgccggaaggtgccgaattgatgaatcgccttcct
gaacaagaactggttccctttatgatgcaccaggatttcaacatcggcctgctggccccg
tgtttgagcctggctgggcaagaactctcccgagggatgaggggccatttcgaagccgcc
cgcctggtcacgctgcaccaggtgacggaggtggtgcgcaagctgcccgccaaccaccag
gtcttccagccgatgcggccgatgggatcgtccccgtactggaacaaactcggcaatatt
tacggagacccagaaatttttcagttcacaatggttctagcccaagctttaagtcagtat
ctggtgttgctttccaaactgccagcgtctcttcgcattccccgcgagaaggaaagtgac
attgtgaagtttgtggtaatgctgctagagatgctgtcttggcacttaatatgcaagcag
gttcccctaagtattgatctccaggcagtgctggagtgctgttgcctggcattgcaacag
actgagctgtggaatctctgggcaacaacagagtacaccagccattcctgctcgctaatc
cattgcacccgattcatcctggaagcagtggcaattgagccgggaaatcgcctcctgagt
ccagataaagggaagacgatccagaaggccaccagcgagaatgatggaaggagttcagag
acaccaaattccgagtatattacagccacttgtgaagtggtggcagagttggtggaatgc
ctgcagtctgtcctggctctggggcacaaggagaaccgccccatccctgcattcctgacc
cccgttctgaagaacatcatcatcagcctctctcggttacccttagtcaacagctacgcg
cgggttcccttcctggtctggaagttgggctggtccccaaagccaacgggagaattcagc
acgacgtttcccgaaatcccggtagaattttttcaagagagagaaatcttcaaagaattc
atctatcgcattaacaccctggggtggacaaaccgcatgcagtttgaggaaacctgggcc
accctcctgggtgtccttgtgacccagccgatcacaatggacccggaggacaaccagcaa
gaggaagacatggaaaggacccagataaacgtcctggctgttcaggcgatcacttcctta
gtgctgagcgcaatgaccatcccgctggccggcaatccggccgtcagctgtttggagcag
cagcctcgaaacaaaaccttgaaagctctggacaccaggtttgggagaaaactgaacatc
atccgaggaaccatcgagcaagagattcaagagctggcatctaagagagacaacgttgct
tgccaccatttgtaccaggtgtgggaccccgttccatccctggccccctctactacaggc
gccctcattagccacgaaaaactgctgctgcaaatcaatacggaacgtgaaatggggaac
atggggtacaaacttggacaggtctccatccattctgtgtggctgggaaatagcatcacg
ccgttgcgggaggaagagtggggtgacgatgaagatgacgagagcgacatgcctgtcctt
tcttcgcccccatcctccccaatgaattccaggaagcaccgcgccggggtggacatccat
tcgtgttctcagttcctgctggaattgtacagtcagtggattctcccatccagcgagagc
aagaggacgccggtcaccctgatcagcgaagtggtccgatcccttttagctgtctctgac
ttatttacggaaagaaaccagtttgaaatgatgtacaccaccttgacggaactgcggaag
gtccacccgtccgaagacgagatcctccttcagtacttggtccctgctctgtgtaaagca
gctgccgttcttggcatggataaagctgtggccgagccggtcagccgcctgctggaatcc
acgctccgtagcgcacacatgcccagccgaattggagccctgcacggcatcctctacatt
ttggagtgcgacctcctggacgacacggcgaagcaactcgttccggtcatcaccgactac
ctgctgtccaatctgcgaggagttgcccactgtgtgaacctccacaatcagcagcacatc
ttggtcatgtgcgccgtggccttctacttaatcgaaaactaccccgctgacgtcgggccc
gaattctcttcaggaattattcagatgtgcggagtgatgctgtccgaaaatgagggatct
actccgtcgttgatctatcactgtgtgctcagaggtctggaaaggctcctcctttcggag
cagctgtctcagctggactgtgaagccctggtcaagctgagtgtggaccgcgtgaacgtc
ctcagtccccacagagccatggcggccttggggctcatgctgagctgcatgtacacagga
aaagagaaagtcagtcccggacgaagcgcagatcaccacccggcagctccggacagcgaa
tcagtcatcgtggcgatggagcgagtgtctgtcctctttgaccggatcagaaaaggcttc
ccctttgaagcccgggtggtcactcggatcctcccccagtttctggatgactttttcccc
ccgcaagacgtgatgaataaagtgattggagaatttttatccaaccagcaaccctaccca
caattcatggcgaaagtactctacaaggtcttccagacgttgcacacgaccggtcagtcc
tccatggtccgggactgggtgatgctgtcgctctccaactttacgcagcgcacgccgatc
gccatggcgatgtggagcctctcctgtttttttgtcagcgcttccaccagccagtggatt
tcggggattctcccacacattatcagcagaatggggaaatcggagcaaatagacgtcaaa
ttgttttgcctggtggccatagatttttacaggcatcagatagacgaagaactggatcgc
cgtgccttccagtcgatctttgaagtggtctcctcgccggggaatccgtatcaccacctg
ctgacttgcttgcaaagcattcacaagatcaccccgtgttga
DBGET
integrated database retrieval system
