Crotalus tigris (Tiger rattlesnake): 120316195
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Entry
120316195 CDS
T08476
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120316195 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctig03041
]
120316195 (DHX15)
03009 Ribosome biogenesis [BR:
ctig03009
]
120316195 (DHX15)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120316195 (DHX15)
Spliceosome [BR:
ctig03041
]
Complex A
U2 snRNP components
U2 related factors
120316195 (DHX15)
Complex B
120316195 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120316195 (DHX15)
Ribosome biogenesis [BR:
ctig03009
]
Eukaryotic type
90S particles
Helicases
120316195 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
DUF3915
AAA_29
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
120316195
NCBI-ProteinID:
XP_039217445
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYGSNKKRATAAAADGKDRDRDRDRDDRSKDRDRERDRDREREKEKDLR
PSANSALLAGVGLPPLKPTLFPQGINPFTNLPHTPRYYEILKKRLLLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKPTGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIVKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctcgacctcggcgacgactacggctccaacaagaaacgcgcc
accgccgccgccgccgatgggaaggatcgagatcgtgaccgggatcgcgatgatcgctcc
aaagaccgggaccgagagagagatcgcgaccgggaaagagagaaggaaaaggatttacgc
ccttcggccaactcggccctcctggctggcgtcgggctgccccctctgaagcccaccttg
ttcccacagggcattaatccctttacaaacctgccccacaccccccgttactatgaaatc
ttaaagaaacgcctgctgctcccggtgtgggaatacaaggaaagatttaccgacatcctc
atcagacaccagtccttcgtgctggtgggtgagacgggctccggtaaaaccacccagatc
cctcagtggtgtgttgactacatgcggtccctgcccggaccgaagcgaggggtcgcgtgt
acacagccgaggagagtggctgcgatgagtgtggcccagcgagtcgccgacgagatggat
gtgatgctgggccaggaggtcggttactctattcgatttgaagactgcagcagcgccaaa
accattttgaagtatatgactgacggtatgttgctacgtgaagccatgaatgaccctctg
ctcgaacgttacggggtcatcattcttgacgaggcccacgaaaggaccctggctacggat
attttgatgggagtgctgaaggaggttgtaaggcagaggtctgatttaaaggtgatagtg
atgagcgccactctagatgctggcaagtttcagatttatttcgataactgccctctgctc
accattcctggccgtacgcatccggtggagattttttatactccggagcccgaacgggat
tacctcgaagcagccatccgtacagtaatacaaatccatatgtgcgaggaagaggaagga
gacctgcttctttttctgactggacaagaggagatagatgaagcctgcaagaggataaag
cgtgaaattgacgacctgggccctgaagtgggtgacattaaaatcatccccttatattcc
acacttccccctcagcaacaacagaggatttttgagcccccacctcccaaaaagcccact
ggtgggataggacgaaaggtggtcgtatcaactaatattgctgagacatcattgacaata
gacggggttgttttcgtcattgatcctggctttgcgaaacaaaaggtctacaatccacga
atcagggtggaatctctgttggttaccgcgattagcaaagcttccgctcaacagagggct
ggccgtgctggtcgtactcggcccggcaaatgtttccggctctacacagaaaaagcgtac
aaaactgagatgcaggacaacacctatcctgagattctgaggtcaaacttgggttctgtg
gtattacagctgaagaagcttggtatagacgatttagttcacttcgattttatggacccg
ccagctccagaaaccttgatgagagccttggagcttctgaattacttagcggctttaaac
gatgacggagacctgactgaactggggtccatgatggccgagtttccccttgacccacag
ctggctaaaatggttattgcaagttgcgactacaactgttctaatgagattctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagccaagaaagctgcc
gacgaggccaagatgcgattcgcccacatagacggagatcatttgacgttgctgaatgtg
taccacgcttttaaacaaaatcatgaatcggttcagtggtgctatgacaacttcattaac
tacaggtccctcatgtctgcagacaacgtacgccaacagctgtcacgaatcatggacagg
tttaatctgccacgcagaagcacagacttcaccagcagggactattacatcaatatacga
aaggccttggttaccggttacttcatgcaggtggcccatttggaacggacggggcattac
ctgacggtgaaagataaccaggtagttcagctgcacccctcgacagttctcgaccacaaa
ccggaatgggtgctttacaacgaatttgtccttaccacaaagaactacattcgcacttgt
acagacatcaaaccagaatggttggtgaaaattgctccccaatattacgacatgagcaac
ttcccacaatgcgaagcaaagagacagctggaccgcatcatcgtcaaactccagtcgaag
gagtactcccagtactga
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integrated database retrieval system
