Crotalus tigris (Tiger rattlesnake): 120316265
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Entry
120316265 CDS
T08476
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120316265 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120316265 (TAF5)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120316265 (TAF5)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120316265 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
120316265 (TAF5)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120316265 (TAF5)
STAGA complex
120316265 (TAF5)
TFTC complex
120316265 (TAF5)
SAGA complex
120316265 (TAF5)
SLIK complex
120316265 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
CDK5RAP3
VPS8_N
WD40_like
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
120316265
NCBI-ProteinID:
XP_039217573
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MAALPEEPTEAVPVKPDPDAGAPPAPPAPLSQSPISTAATVATSAPPPSASSVAATLLAD
GEPLAGGVDSKSSVTSSPTPAASQLPTDRQTLQAVLQFLRRSNLRESEEILRREARGLID
DLSSDPNSLAPGVPGAHGGEGQDLSVGIIAPGAGDVLINSITFGQTGATISPAALSTPPA
APLGPPAKAGVLVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIERALDCHRAELSQL
FYPLFVHMYLELVYNGHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMRGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKAKVFFGLLKEPEIELPLDDEDEEGENEEGKPKKKKPKKDNMGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSMIVGGFADSTVRVWSVTPKKLRSVKLATDLSVIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTIRLWSLLTFSCLVGYKGHNYPVWDTQFSPYGYY
FVSCGHDRVSRLWATDHYQPLRIFAGHLADVICTRFHPNSNYIATGSADRTVRLWDVLNG
NCVRIFTGHKGPVHSLAFSPNGRFLASGATDGRVLLWDIGHGLMVGELKGHSDTIYALKF
SRDGEILASGSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPESSQDMLLGTYMTKSTP
VIHLHFTRRNLLLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttgccggaggagccgacggaggcagtaccggtaaagccggatcctgatgca
ggagcgccgcccgctccgcccgctcctctctcccagtccccgatctcgacggcagcaaca
gttgcaacaagtgcccctcctccgtctgcctcctcggtcgctgccacccttctcgcggat
ggggagccgcttgcgggaggagttgactcgaagagctcggtgacttccagccctacgccg
gcagcctctcaactacccaccgaccggcagactctgcaggcagtgctacagttcttgcgg
cgcagcaatctgcgcgaatcggaggagatcctccgaagggaagcccgtggcctcatcgac
gacctctcgagcgacccgaattccttagcgcccggcgtccctggagctcatggaggggaa
ggacaggatctcagtgtcgggatcatagctcctggagctggggacgtgctaatcaattct
atcacatttggccagactggagctacgatctctccagccgctctctcgacacctcctgca
gcgcccttggggcctcctgccaaagccggagttcttgtagaagatcagccagatgtgagt
gcagtgctatctgcttataatcaacagggagacccagcactttatgaagaatactacagt
ggattgaaacacttcattgaacgtgctttggattgtcatcgagctgaattatcacaactt
ttttatcctctgtttgtacacatgtacttggaactagtctacaatggacatgaaaatgaa
gcaaaatcgttctttgaaaagtttcacggggatcaagaatgttattaccaagatgacttg
cgtgtattatcaagtttaaccaaaaaagagcatatgaggggcaatgagactatgctggat
ttccgaacaagcaagtttgtgttgcgtatttcccgtgactcttaccagcttctgaagaga
catcttcaggagaaacagaacaatcagatatggaacattgttcaagaacatctttatatt
gatatttttgatggaatgcctcgtagtaaacaacagattgatgctatggtgggaagttta
gctggagaagcaaaacgagaagcaaataaagcaaaggtattttttggcttattaaaagaa
ccagaaattgagttgcctttggatgatgaagatgaagagggagagaatgaagagggcaag
ccaaagaaaaaaaagccaaaaaaagataatatgggatcaaaaagtaaaaagcaggatcca
aatgctcctcctcagaatagaattcctcttcctgagctaaaggattctgataagctagat
aaaataatgaatatgaaggaagctactaaacgtgttcggcttggtccagattgtttgcca
tctatttgcttctacacatttcttaatgcataccagggtcttacagctgtggatgttaca
gatgactctagcatgatcgttggaggctttgctgattccaccgtcagggtatggtctgtg
acacccaaaaagcttcgcagtgtaaaattagccacagatctcagtgtcatagataaagaa
tctgatgatgttttagaaagaatcatggatgaaaaaacagcaagtgaattgaagatttta
tatggccatagtggacctgtctatggtgctagctttagtcctgataggaactatttgctg
tcatcttcagaggatggcactatcagattgtggagtcttctaactttttcttgtttggtg
ggatacaaaggacataattatcctgtatgggacacacagttctctccgtatggatattac
tttgtatcttgtggccatgacagagtgtctcgtttatgggctacagatcactatcagcct
ttgcggatctttgctggtcatttggcagatgtcatatgtacacgttttcacccaaactcc
aactacattgccacaggctcagcagacagaactgtgaggctttgggatgtacttaatgga
aactgtgtaagaatcttcacaggacataagggaccagttcattcattagcattttctcct
aatggacgattcttggcaagtggagcaactgatggaagagtgcttctgtgggatattggc
cacggtttaatggtaggagagctaaaaggacactcagacacaatttatgcactcaaattc
agtagagatggagagatcttagcttcaggttcaatggacaacacggttaaactttgggat
gctgtgaaagcttttgaggacttggagacagatgattttacaacagccactggacacata
aaccttcctgaaagttcacaggatatgctgctgggcacatatatgaccaaatcaactcca
gttatacacctccactttactcgaagaaatttacttcttgctgctggggcttatagtcct
caataa
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integrated database retrieval system
