Crotalus tigris (Tiger rattlesnake): 120316384
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Entry
120316384 CDS
T08476
Symbol
SNRPA
Name
(RefSeq) U1 small nuclear ribonucleoprotein A isoform X1
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120316384 (SNRPA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctig03041
]
120316384 (SNRPA)
Spliceosome [BR:
ctig03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
120316384 (SNRPA)
Complex B
120316384 (SNRPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
120316384
NCBI-ProteinID:
XP_039217842
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MAVPEPRSNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRNLKMRGQAFVIFK
EICSSTNALRSMQGFPFYDKPMRIQYAKVDSDIIAKMKGTFVERDRKREKRKPKGQEAQV
TKKQIPGAAAPVAPSVQGTVPGMPPMNQAPCVMHHMPGQPPYMPPPGMMPPPGMAPGSIP
PGAMPPQQMLPGQMATAQQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP
GRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcggttccagaaccccggtccaatcacaccatctacatcaacaaccttaatgagaaa
atcaagaaagacgagctcaagaagtcgctgtatgccattttctcccagtttgggcagatc
ctcgacattctggtgtcccgcaacctgaaaatgagaggccaggcctttgtcattttcaaa
gaaatatgcagctccaccaatgccctacgctccatgcaggggttcccattttatgataag
cccatgaggatccagtacgccaaggtagattctgacatcatagccaagatgaagggcact
tttgtggagcgggaccgcaagagagaaaagcgaaagcccaaaggccaagaggcacaagta
actaagaagcagataccaggagcagctgccccagtggccccctctgttcagggcaccgtg
ccaggcatgccccccatgaaccaggctccctgtgtgatgcaccacatgccagggcagccc
ccttacatgccacccccaggcatgatgccaccacctggcatggcgccgggttccatcccc
ccaggggcaatgccgccacaacagatgctgccaggacagatggccacagcgcagcagctg
tcggagaatccgcctaaccacatcctgttcctcaccaaccttcccgaggagacgaatgag
ttgatgctgtccatgctcttcaatcagttccctggcttcaaggaggtgcggttggtgccc
gggcgccatgacattgcctttgttgaattcgacaatgaggtgcaggccggtgctgcccgt
gatgccctccagggattcaagatcacccagaacaacgctatgaagatctcctttgccaag
aagtga
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