Crotalus tigris (Tiger rattlesnake): 120316403
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Entry
120316403 CDS
T08476
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120316403 (SAMD4B)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120316403 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
120316403
NCBI-ProteinID:
XP_039217894
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All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MMFRDQVGMLAGWFKGWNECEQTVALLSLLKRISRTQARFLQLCLEHSLADCTEIHVLES
EANSAALINQWHQEPKDKVVSLLLSHLPLLQPGNADAKSEYMKLLQKVLAYSIESNLFIE
ESRQLLSYALIHPATTVDDRSSLALWLNHLEERLSIGYSSQGRGRPDTAYHSRQGSDDWQ
GPVETGLGDLGHGWQEKAPRENGHLSFHPAGSVSSAINSIGSSTGSTALPCQIHPSPLKR
SMSLIPTGQQVPSEWMNMDEMGARSAFISGGEHAPLSPQSSVASSGSEQTEEQPGGRNSF
QEDGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEQHLESQNVTKGARHKIALSIQ
KLRERQSVLKSLEKDILEGGNLWNALQELQQIITTPIKAFHALQAAAASKEAQPLAAEPR
GGPKLALEKSSNSTEGKEATDDPFPPPTGSPCDGESGAAPIGEGDIAGQFTRVMGKVCTQ
LLVSRPDEENITSYLQLIEKCLMHEAFTETQKKRLLSWKQQVLKLLRTFPRKAVLDMQGY
RPQKGWAFGSNSLPIAGSVGVGVARRGQRQFQMPPRALPPSRMGILSPVGIGGVSPRHGL
TSPNLGSQGRQNLWFANPGGSNSMPGQNRSSVQRTHSLPVHTSPQAILMFPQDCQLPGTD
LEINPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggatcaggtgggcatgctggccggctggttcaaaggctggaacgaatgt
gagcagacggtcgccctgctgtcccttctcaagcgtatctctcgcacccaagcccgcttt
ctgcagctgtgcctggagcactcgctggccgactgcacagagatccatgttctggagtca
gaagctaacagcgcagccctcatcaaccagtggcatcaagagcccaaagacaaagtcgtc
tccctgctcctctcccacctgcccctcctccagcctggcaacgcagacgccaagtccgaa
tacatgaagcttttgcagaaggtgctggcctactccatcgagagcaacctcttcattgaa
gagagccggcagctgctctcctacgccctcatccacccggccaccaccgtggacgaccgc
agctccctggccctttggctcaaccatctggaggagcgcctttccatcggctactccagc
cagggcaggggacggccagacacggcctaccactcgcgccaaggctcagacgactggcaa
ggcccagtggagacgggcctcggagatctggggcacggctggcaggagaaggcaccacgg
gaaaacgggcacctgtccttccaccctgccggctcggtgtcctcggccatcaatagcatt
gggagcagcacgggcagcacagctcttccttgccaaatccaccccagcccgctgaagcgc
tccatgtcgctcatccccacgggccagcaggtccccagcgagtggatgaacatggacgag
atgggggccaggtcggccttcatctccggcggggagcacgcccccctctcgccccagagc
agcgtggcttcctcgggcagcgagcagacggaggagcagcccggtggtcggaactccttc
caggaggacggcagcggcatgaaagatgttccctcgtggctgaagagcctccgtctccac
aaatacgcagcgcttttttcccaaatgacttacgaagagatgatgactctcacggagcag
catctggaatcgcagaatgtgaccaaaggagcgaggcacaaaattgccctaagtatccaa
aagttgcgcgaaaggcagagcgtcctgaagtccttggagaaggacattttggaagggggg
aacttatggaacgcccttcaggagctgcagcagatcatcaccacccccatcaaggccttc
cacgctctgcaggctgcggccgcatccaaggaggcccagccattggccgccgagccgagg
gggggtcccaagctggctctggagaaaagcagcaacagcaccgagggcaaggaagccacc
gacgaccccttcccgcccccaaccggctctccgtgcgatggagaatccggagcggcaccg
atcggcgaaggggacattgcagggcagttcactcgcgtgatgggtaaagtgtgtacgcag
ctgctcgtctccaggccggatgaggagaacatcaccagttacctccaactgatagagaag
tgcttgatgcacgaggccttcaccgagacccagaaaaagcgtctcttgtcctggaagcag
caggtcctgaagttgctccgtacattcccgaggaaggctgtgctggacatgcaaggctat
cgcccccagaaaggatgggcctttggctccaactctctccccatagctggatctgtgggg
gtgggagtggcccgccgaggacagaggcagttccagatgcccccccgtgccctcccccca
agccgcatggggatcctgagtcccgtggggatcggtggagtctctccacggcacggtctg
accagcccaaatctggggagccaaggtcggcagaacctctggtttgccaatcccggtggc
agcaacagcatgcccggccagaaccgcagctcagtccagcggacccactcgctgcccgtc
cacacctcccctcaggccatcctcatgttcccacaggattgccagctccctggaacggat
ctggagatcaaccccaccttggagtccctgtgcctgagcatgacggagcacgcgctgggc
gatgggacggacaagacctcaaccatctga
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