Crotalus tigris (Tiger rattlesnake): 120316412
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Entry
120316412 CDS
T08476
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03440
Homologous recombination
ctig03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120316412 (BLM)
03460 Fanconi anemia pathway
120316412 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctig03032
]
120316412 (BLM)
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120316412 (BLM)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120316412 (BLM)
DNA replication proteins [BR:
ctig03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120316412 (BLM)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
120316412 (BLM)
Bloom's syndrome complex (BTR)
120316412 (BLM)
FA (Fanconi anemia) pathway
120316412 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
DEAD
RecQ_Zn_bind
Helicase_C
BDHCT
HRDC
RQC
Helicase_Sgs1
Motif
Other DBs
NCBI-GeneID:
120316412
NCBI-ProteinID:
XP_039217919
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MAALPRNNLREQLQRHSARGALGSRAEPRPRPAGFVFRKMNCLDVCASGYMGGTKLTALK
DKNTNSSLEKQNGIKNKQTKINELFETTLKVEEGKKEDSNDQHVKNFDCFISSVKESDVG
CKVGGSEIPTPEHNCSNNSFIDLTDSWEDMEDFETPGPQKRCPQQSVSFQDKWSVKNRKT
AKSLNPSTGKSKISSTERDNEECNDVYICTNRKTQMLHKEQEGGSLPVPCLVPSNSSQRD
FSNGEREEEKSLKSLPTGKKEKSWIEQNDSGLPLSGNEESEDGRDDPQVFSESEDYVDFV
PPSPEEEVLPASFVLKSTRHFPQRTADEATLSPELSMNQLPEFGETSKRSEGRKEGQSLV
CVMEDICRLVDSIPEKELKSLLGGQELLRLRDCRRKLLSNPRNGNRIGADTPLDINRKCN
FDHGGSRDGTCSSQLGKTCPALPQWGACTPGPFSGKLPGDVPPLPGFHLPPSQGSASADP
SVSVKDPTLDASSSAMESSGISCPKREAGGIWGNPDLEAKTCWWPSTLSGAKPESQGKRT
PFMSSVERGSSLATGGQTLSLDDDFDFDDLDEAMSASTTRHAYEGPAQLAADASPAQLFL
KGNRVVSKANTDLLRSNVSYTDRSVSGESCPVLPLIKNTPSRNATLEPFRGLAFPHSNEM
LKIFHKKFGLHHFRTNQLEAINAALLGQDCFILMPTGGGKSLCYQLPACVSVGVTIVISP
LRSLIVDQVQKLTSMDISATYLTGDKTGAEASQIYMQLSKKDPIIKLLYVTPEKVCSSGQ
LMSALENLYQRQLLARFVIDEAHCVSQWGHDFRQDYKRLNMLRKKFSLVPMMALTATANP
RVQKDILNQLEMHQPQVFTMSFNRHNLKYDVLPKKPKTVALDCLQWIRKYHPGDSGIIYC
LSRYECDSVANALQGGGLSALAYHAGLPDGTRDLVQQKWINQDGCQVICATIAFGMGIDK
PDVRFVIHASLPKSIEGYYQESGRSGRDGEVSHCLLFYSYSDVTRLRRLILMEREGNSHT
RQTHFNNLYSMVHYCENIMECRRIQLLAYFGETGFNPRFCKEHPDVSCDNCCKQQVYKLK
NVTEEVKNIVMFVKEHCGEKGTRNIKRTAGRYTLNMMIDIFLGSRSAKIQCGLFGKGAAY
SRHNAERLFRKLVLDRILDEDLYISANDQAIAYIQLGEKAGALLNGFLQVEFCETESASN
IRKQRALETKMSLQEEMIKKCLSELTDVCKNLGKVFNIHYFNIFNTATLKRIAETLSSDP
AVLLRIDGVTEDKLEKYGAEIIEVMQKYCSKILPAEKKPLTATETDFSRCDSEGEEEATN
TTSIYFQTKNGKGRKRKKSHFFKESKKKKGSGGQQAYCKRSYKACKSTLAGSKNSTSCII
PGQPGAGKRPGMMTVPKPQSRQYLKPSYILL
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccttccgcgcaacaacctgcgcgagcagctgcagcgtcactcggccaggggc
gccctcggctcgcgcgccgagcccaggccgaggcccgcgggatttgtattcagaaagatg
aattgccttgatgtctgcgcatcaggatatatgggtggaacaaaacttacggccttaaag
gacaaaaataccaattcttctttggaaaaacaaaatggtattaaaaataagcaaaccaaa
attaatgagctgtttgaaacaacactgaaagttgaagaaggaaaaaaagaggattcaaat
gatcaacatgtcaaaaatttcgattgttttatctcttctgtgaaagaaagtgatgtgggc
tgtaaagtagggggatccgagatccctactccagaacataattgttcaaacaactcattt
attgaccttactgatagttgggaagacatggaggactttgaaacacctggaccacaaaaa
agatgtccacaacagtctgtatcgtttcaagataagtggtctgtaaaaaatagaaagact
gcaaaaagcctgaatccctctactggaaaatcaaagatatctagcacagaaagagataat
gaagaatgtaacgatgtgtatatttgtacaaataggaaaacacaaatgcttcataaggaa
caagagggaggcagcctgcctgttccttgtcttgtcccttcaaattccagtcaaagagat
ttttcaaatggagaacgtgaagaggagaagtctttgaaaagtctcccgacaggaaaaaaa
gaaaaatcttggattgagcaaaatgattctggcctccctttaagtgggaatgaagagtct
gaggatggaagggatgaccctcaagtattcagtgagtctgaagactacgtggacttcgtt
cctccatccccagaggaggaggtgctgcctgcttcgttcgtgctgaagagcactaggcat
tttccccaaaggacagctgatgaggcaacactgagtcctgaactctcgatgaatcaactt
ccagagtttggagaaaccagcaaaaggagcgaaggaaggaaagaaggccagtccctcgta
tgtgtaatggaagatatctgtcgactggtggattccattccagaaaaagagttgaagtct
ctgctaggcggtcaagagctgcttcggcttagagattgcagaagaaaactgttgagcaac
cccagaaatggaaacagaatcggtgctgatacacctctagatatcaaccgcaaatgtaat
ttcgaccatggtgggtcccgagatggaacttgctcttctcagctgggaaaaacgtgtccc
gctcttcctcagtggggtgcttgtactcctgggccattttccggcaagctgcctggtgat
gtcccccccctgcctggctttcatctgccaccctctcaaggatcagccagcgccgatccc
tctgtttccgtgaaagatcctaccttggatgcttcctcttcggccatggaaagttcaggc
atatcttgtcccaagagggaagccggtggaatttgggggaatccagacttagaagcaaag
acatgctggtggccttcaacgctgagtggagcaaaaccagagagccaagggaagcgcact
ccgtttatgagcagtgttgaaagggggagttctttggcaactggagggcagacgcttagc
cttgatgatgattttgattttgatgacttggacgaggcaatgagtgcttcaacaaccaga
cacgcttatgaggggccagcccagcttgctgcagatgcttcccctgcacaattatttttg
aaaggaaaccgtgtagtctccaaggcaaataccgatcttttgcgtagcaatgtttcttac
acggaccgttctgtgagtggcgagagttgtcctgttcttccactaattaagaacacacct
tccagaaatgccaccctggaaccattcagaggtttagcatttccacattctaatgagatg
ctgaagatatttcataaaaagtttggtctccatcattttcggaccaatcagcttgaagcc
attaatgctgctttgctgggtcaagactgcttcatcctgatgcccacaggaggtggcaag
agtctgtgctatcagctaccagcctgtgtttcagtgggagtcaccatcgtcatctctccc
ttgaggtccctgatagtggatcaagttcagaagttgacctccatggatatctcagccacg
tacctcacaggtgacaagactggtgctgaagcatcccaaatttacatgcagctctccaag
aaggaccccattataaaactcctctacgttactccagagaaggtttgctccagtggtcag
ctgatgtcagcgctggagaatctgtaccagcgacagctcttggctcgctttgtgattgac
gaggcccactgcgtcagtcagtggggtcatgattttcgtcaagactacaagcggctgaac
atgctccgaaagaagttctccttggttcccatgatggcccttactgccaccgccaacccc
agagtgcagaaggacatcctgaaccagctggagatgcaccagccccaggtgtttactatg
agctttaacaggcacaacttgaaatacgacgtactacccaagaaacccaaaaccgttgct
ctagattgcttacagtggatcaggaaataccaccctggtgattcaggaatcatttattgt
ctctcgcggtatgaatgtgactccgtggccaacgctctgcaagggggcggcctctctgcc
ctggcctaccacgctggtctccctgacggcaccagagatctcgtgcagcagaaatggatt
aaccaggatggatgccaggttatctgtgccaccattgcatttggaatggggattgacaag
cccgatgtgcgctttgtgatccacgcctccctccctaaatctattgaaggctattatcag
gaatctggcagaagcgggcgggatggcgaagtctcccactgcctgcttttctacagctat
agcgacgtgaccaggctgagacggctcatcctgatggaaagggaaggtaacagccacacc
cggcagacgcacttcaacaacctctacagcatggtccattactgcgagaacatcatggaa
tgccggaggatacagttgctggcctactttggagaaacagggtttaatcctagattttgt
aaggagcaccctgatgtaagctgcgacaactgctgcaagcaacaggtgtacaagttgaag
aatgtgactgaagaagtaaaaaacattgtgatgtttgttaaggaacattgtggtgaaaaa
ggaactagaaatatcaagagaactgcaggaagatataccctcaatatgatgattgacatt
ttcttgggttcaagaagtgcaaagattcagtgtggcctctttggcaagggagcagcctac
tcacggcataatgccgagcgactttttaggaagctggtgctggacaggattctggatgaa
gacttgtacattagtgctaacgatcaagcgatagcgtacatccagttgggggaaaaagct
ggtgctctgctgaatggcttcttgcaggtggaattctgtgaaacagaaagtgccagcaat
attcggaagcagagggctttggagaccaagatgtccctacaggaagagatgattaagaaa
tgtctctctgaactcacagatgtctgtaaaaaccttgggaaagtgtttaatatccactat
tttaatatttttaacactgccacattaaaaagaatagcagagactttgtcttcagatcca
gcagttttgcttcggattgatggtgtgacagaggacaaattagagaaatatggagcagaa
ataatagaagtgatgcagaagtattgttcaaagatactaccagcagaaaagaagcctctc
acagccacagagactgactttagcagatgtgatagtgaaggtgaggaagaagcaacgaat
acaacgtccatatatttccaaaccaaaaatggcaagggaaggaagaggaagaagtctcat
ttttttaaggaatcgaagaaaaaaaaaggatctgggggacagcaggcttattgtaagagg
agttacaaagcctgcaaaagcactttggctggttctaaaaattctacttcctgtattatt
cctggccagccaggagctggcaagaggcctggaatgatgacagtgccaaagccccaaagc
agacaataccttaaaccttcttacatacttttgtga
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integrated database retrieval system
