Crotalus tigris (Tiger rattlesnake): 120316489
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Entry
120316489 CDS
T08476
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120316489 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120316489 (DCP1B)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120316489 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
120316489 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
120316489
NCBI-ProteinID:
XP_039218147
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MAASVAGAAPLGKGLDISLAALQRHDPYISSILDVASQVALYTFGHRANEWEKTDVEGTL
FVYTRSASPKYGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEE
CQRIAELMKNLTQHEQLKAQQGSGIGISPVSLSSGDRKDMDILQMLTRAKDEYTKCKTCS
EPKQMTSSSALYHNPNLIKPIPLKPRESQKVQNTDSEPQHLSLMTLFGKQEKSSLYQNVS
GPSQKLHQDIFPLRQGVVRTFSYEEPGRHSPTAEKQLCPAIQKLMVRGPELHPVSELPES
RLCENGSQPSSVGEAFTGLFQPVTSQSVGSSHPAQNTVCARSLLQQLQGQSEQRTKVEAN
SIGLANSTAPGFNRTPAISSMAQVNSVIQPPMMYFNGSLPSPALGKEQSKPAKQSHPLPG
NHPGNSGIISPQELLKKLQIVQQEQQLHIASRPTLAAKFPVVTQASTTLKPLDSWMDKAS
ATEKQPPLLQIISPQRIPATIAPSQLMSPMVFSQSAPQLPKPSESGWLPVMNQESTSGSA
NLLLPLQNSEAIIPKSSPLTKLQLQETLLHLIQNDDNFLNVIYDAYLGSMRKAALKKPT
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtcagtggctggggctgccccactgggcaaggggttggacatcagcttggcg
gctctccagcggcacgacccctacatcagcagcatcttggacgtggccagccaggtggcg
ctctacactttcgggcatcgcgccaatgagtgggagaagactgatgtggaaggaacacta
tttgtatatacaagatcagcttcgcccaagtatggatttaccattatgaataggctgagc
atggaaaatcggacagaacccataacaaaagatctggatttccagttgcaggatcctttt
ctactctacagaaatgctagattgtccatttatggaatttggttttacgataaggaagaa
tgccaaagaattgcagagctgatgaaaaatttaactcagcacgaacaactgaaagcacaa
caaggatctggcataggaatttcaccagtcagcctcagctctggtgacaggaaagacatg
gatatcttacagatgctcaccagagccaaagatgaatacacaaagtgtaaaacatgttcc
gagccaaaacaaatgaccagttcttctgctctataccacaatcccaatttgatcaaacca
atccctctgaagcccagggaaagccagaaagtccagaacacagattctgagccacagcac
ctatcccttatgactctctttggaaagcaggaaaaatcaagtctataccaaaatgtctca
gggccatctcagaaactccaccaagacatttttcctctgagacaaggagttgtgcgcact
ttctcatacgaggagcctggaagacactcgcccacagcagaaaagcagctctgcccggcc
attcaaaaactgatggtgcgtggaccagagcttcacccagtctcagaactcccagagagc
cgcctctgcgagaatggcagccaaccttcttccgtaggagaagctttcactgggctcttc
cagcctgtgacttcacagagcgttgggagttctcatcctgcccagaacaccgtgtgcgcg
aggagcctgctccagcagttgcaaggccagtctgaacagaggactaaagtggaagctaac
agcataggactagcaaattcaactgctccaggcttcaacaggactccagccatctcctcg
atggcccaggtaaacagtgtaatacagccacccatgatgtacttcaatggttccctacca
agcccagctcttggtaaagaacaatccaaacctgctaagcagtcgcatcctcttcctggg
aatcaccctggaaattctggcataatttcacctcaggagttgttgaagaaactgcagata
gtgcagcaggaacaacagctgcacatagccagtcggccaaccttagctgctaagtttcct
gtagttactcaggcctccaccactctgaaacctttggattcttggatggacaaggcttca
gcgacagaaaagcaacccccacttcttcagatcatctccccgcagcggattcctgctact
atagctccatcacagctgatgtccccaatggtatttagtcagagtgccccacagctgcca
aaaccaagtgaaagtggatggctgcccgtcatgaatcaagaaagtacttctggatcagca
aaccttcttctgcctctacagaactcagaagcaatcatcccaaagagcagcccactaacc
aagttacagctacaagaaacgcttctgcatctgatccagaatgacgacaactttctaaac
gtcatctatgatgcttatcttggcagcatgagaaaagcagcgctgaaaaagcctacctga
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