Crotalus tigris (Tiger rattlesnake): 120316753
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Entry
120316753 CDS
T08476
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03030
DNA replication
ctig03410
Base excision repair
ctig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120316753 (POLE)
03410 Base excision repair
120316753 (POLE)
03420 Nucleotide excision repair
120316753 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctig03032
]
120316753 (POLE)
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120316753 (POLE)
Enzymes [BR:
ctig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120316753 (POLE)
DNA replication proteins [BR:
ctig03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
120316753 (POLE)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
120316753 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
DNA_pol_B
zf-DPOE
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
120316753
NCBI-ProteinID:
XP_039218643
LinkDB
All DBs
Position
Unknown
AA seq
2292 aa
AA seq
DB search
MALRKGGGGGWRRRWAAEPAAGDGEKETPRDEGSSLSALRRLERSQWTDKIDARFGFERL
KEPAERTGWLINMHPTEILDEDKRLVSAVDYYFIQEDGSRFKVALPYRPYFYIAAQKGCD
REVSSFLSKKFQGKIAKLEIVLKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVRREITPA
VKKNRERDQALDTYTTLLTSALTGHSLTHEEEPSKKTADQMDNIVDMREYDVPYHIRLSI
DLKIHVAHWYIVRHRGSSFPPEIIRRDDMVERPDPVVLAFDIETTKLPLKFPDAETDQIM
MISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCIFNEPDEAHLIQRWFEHVQET
KPTIMVTYNGDFFDWPFVEARASVHGMNMQQEIGFQKDSQGEYKSSQCIHMDCLRWVKRD
SYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKYV
HPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIVFPNKQEQEFNKLTEDGHVL
DSETYIGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTLRHAIEEEEGIPLEQVT
NFQEVCEEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVNEATCAAC
DFNKPGASCQRKMTWQWRGEFMPASRSEFHRIQQQLESEKFPALFPDGPPRAFHELSQED
QAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKV
WKKKLAAATEMGDASEAKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGI
VCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTHSKKPKVTISYPG
AMLNIMVKEGFTNNQYQELVDPASLKYVSRSENSIFFEVDGPYLAMILPASKEEGKKLKK
RYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWL
DVLHSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGL
SCRFIISKKPEGSPVTERAIPLAIFQAELSVRKHYLRKWLKSPSLQDFDIRMILDWEYYI
ERLGSTIQKIVTIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVFKQKKISELFASEGKRQ
VSTNIAREDTPNSQVTDMEDFGVTKPLQPAPPISSKRKRIPTAEESQQQSQPLELTQSWR
EILGTPPPIGTTKEERLLWLRYHKKKWELQARQRQERRKKRRLADGEAVLGGGVIRAGPS
KGLSNYLRKTARSILDMPWQIVQIAETGQPGLFKLWAVIESDLYCLKLNVPRIFYINQRI
PKPEESMVYRKVNRILPRSSLVFNLYEYSVPEDMYLERINEINASLSAPDIEGVYETQVP
LLLRALVHLGCVCMVNKHLVRHLSGREAETFDLEHLERKSLAQFSYLEPGSIRHIYLYHH
SQGSKALLGLFIPSQRKASIFVLDTVRSNQMPNLGTMYSAEHASMVEKIGQELLPPAKHI
FEVRAETDLKSICRALQRLLMGYKDERRGPTLIAVQSNWDLKRLVSGMPVLEEFPLVPMH
VADDISYSILDWQRHGARHLIRRYLKLDMCLSQAFDMSRYYHLPIGNLPDDISIFGTDLF
LSRHLHRHNHLLWLSPTSRPDLGGKEADDSRLVMEFDERASVEINHPGCYSTVCVELDLQ
NLAVNTILQSHRINDMEGASSMCISFDVIQQASLEDMVVGNQAASVPASYDETALCSNTF
RILKSLVVGWVKEITQYHNVYADNQVIHFYRWLRSPNSLLYDPALHRTLHSMMKKLFLQL
VAEFKRLGSLVIYANFNRIVLCTKKRHIEDALAYVEYITNSIHSKELFHSLAISFSCCWE
FLLWMDPSNHGGIKGKVPSRTHCEEARRSKQTAEVANNEEEEEEEDDDEEEDLGENGIEN
RLENNWNIMQYLPQAASCQNYFLMIVSAYIVAVHHSLKEEMQRDTSGGSPVRRRASSQTS
QEALGETGTMPGAIAFSQEYVSNELTQSFFTITQKIQKKVTGSRHTTEPSEMFPSLPGSH
LTLNNPALEFIKHVCQVLSLDANITNQVQKLKRDLLRLIDVGEFSEDAHFRDPCCSYVLP
EVICRNCNFCRDLDLCKDPALFQEGSLPPSWLCSNCQSQYDSDAIEVALVEALQKKLMAF
TLQDLVCLKCKGIKDTHMPVYCSCAGNFDLLLPTKSFLDHLKVFQGIARHYGMAHLLENV
QWLLQMNPQLLS
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaggaagggcggcggcggcgggtggcggcgccggtgggctgcggagcccgcg
gcgggagacggcgagaaggagaccccgcgggatgaaggctcctcgctttctgctctccgg
cgtttagagcgcagccagtggacggacaaaattgatgcacggtttgggttcgagagactc
aaagaacctgcagaaaggacaggctggctgatcaacatgcacccgacggagattttggat
gaggataaacgcttggtcagtgccgtggattattatttcattcaggaggatggaagtaga
tttaaggtggctttgccctacagaccatacttctacatcgcagcccagaagggttgtgac
cgagaagtgtcatccttcctttccaagaaattccagggaaaaatagccaaattggaaatt
gtactcaaagaggatctggacttgcccaatcacctggttggcctgaaacgaagttatatc
aagctttctttcaacacagtagatgacctggtaaaagtgcgcagggagattacccctgct
gtcaagaagaatagagaacgggaccaggctttggacacttataccaccctgctgactagt
gctctcactgggcacagtctgacccatgaggaggagccctcaaagaagactgcagaccag
atggacaacatcgtagacatgcgggagtacgacgtgccctaccatatccgcctgtccatt
gatctgaagattcacgtggctcactggtacatcgttcgccaccggggcagcagtttccct
cctgagattattcggcgagatgacatggtagaacggcctgatcctgttgttcttgccttt
gacattgagactacaaaactccctttaaaatttcctgatgcagaaacagaccagatcatg
atgatctcctacatgattgatggccagggatacttgatcacaaaccgggaaattgtttcc
gaagacattgaagattttgaatttactcccaaaccagagtatgagggtccgttctgtata
ttcaacgaaccggatgaggctcatcttatccagcggtggtttgaacatgttcaagaaacc
aagccaactatcatggtgacctacaacggagacttctttgactggccttttgtggaagcc
agagcatcggtccatgggatgaatatgcagcaggagattgggttccaaaaggacagccag
ggagaatacaaatcctcgcagtgcatccacatggattgtcttcggtgggtgaagagggac
agttaccttccagtgggcagccacaacttaaaagcagcagccaaagcgaagttgggttac
gatcctgtagagctggatcctgaagacatgtgccggatggcaacggaagagcctcagact
ttggccacctattcagtgtcagatgctgttgccacctactacatgtacatgaagtatgtc
catcctttcatcttcgccttgtgcactatcattccgatggagcccgacgaggtcctccgg
aaaggctcgggcaccttgtgtgaggcgctactcatggtccaagcctatcacgccaacatc
gtcttccccaacaagcaagagcaggagttcaacaagcttacagaggacgggcatgtgctc
gactcggagacgtacatcgggggccacgtggaggccctggagtctggggtctttcgcagc
gatatcccctgccgctttaaaatgaatcctgccgcctttgacttcctcctgcagcgtgtg
gagaagacgcttcgccatgccattgaggaagaggaggggatccccttagagcaggtcacc
aatttccaagaggtttgtgaagagatcaaagtgaaactgaactccctgaaggacgttccc
aacagaattgaatgtcctctcatttaccatctggatgtgggggccatgtatccaaacatc
atcttgaccaataggctgcagccctcggctatagtgaacgaggcaacctgtgctgcttgt
gacttcaataaaccaggggccagctgtcagcggaaaatgacttggcaatggaggggagaa
ttcatgccagcaagccggagcgagttccaccgcatccagcaacagctggagtcggagaag
tttcccgcgcttttcccagatgggcctccccgggcctttcacgagctctctcaagaagat
caagccaaatacgaaaagaagcgtttggctgattattgtcgcaaagcttacaagaagatc
cacgtgacgaaagtggaggagcgggtcactactatttgtcagcgagaaaactccttctac
gtggatactgtccgggcttttcgagaccgtcgctatgagtttaaaggattacacaaggta
tggaagaagaagctggcagctgccactgaaatgggggatgcctccgaagcgaagcgctgc
aagaacatggagatcttgtacgattccctgcagctggcgcacaagtgcatcctcaactcc
ttttatggctacgtcatgcggaaaggggcccgctggtattccatggaaatggctggcatc
gtctgcttcactggggccaatatcatcactcaggctagagagctgattgaacagatcggg
agacccttggagcttgacacagacgggatatggtgcgtgcttccaaatagctttccagag
aactttgtcatcaagtcaacccattccaagaaacccaaggtgaccatttcctatccaggg
gctatgctgaacatcatggtgaaggagggttttacaaacaatcagtaccaggagctggtg
gacccagcatccctcaagtatgtatcccgctcagagaacagcatcttttttgaagtagat
ggtccctatctggctatgatcctcccagcctccaaggaggagggcaagaagctaaagaaa
agatacgccgtgttcaatgaagacggatccctggccgagctgaagggctttgaggtgaag
cggcgaggagagctgcagctggtgaagatcttccagtcctcggtctttgaggctttcctg
aagggcaccacgctggaggaggtctacgcttcagtcgccaaagtagccgattactggctg
gatgtgctgcacagcaaggcagccaacatgcccgattctgagctctttgagttgatctca
gagaatagatccatgtctcggaagctggaggactacggagagcaaaaatccacgtccatc
agcaccgccaagcgcttggctgagtttcttggggaccagatggtgaaggacgccggcctg
agctgtcggtttatcatctcaaagaaaccagaaggctccccagttaccgagagagccatc
ccacttgccatcttccaggccgagctctccgtgcgcaagcattacctccggaagtggcta
aaaagtccttcgctgcaggattttgacatccgaatgatcctagactgggagtattacatt
gaaaggctgggcagcaccatccagaagattgtcaccatcccagcagcactgcagcaggtg
aagaatccggtcccccgtgtccgtcatcctgattggctgcacaagaagctgctggagaaa
aatgatgtcttcaagcagaaaaaaatcagcgagctctttgccagtgaaggcaaaagacag
gtctccactaacatagccagggaggataccccaaatagtcaggtgaccgacatggaagat
tttggggtcaccaaacctctgcagccagcgccccctatatcaagcaagcgtaaacgaatc
cccacagcagaggagagccaacagcagtcccaacctctggagctcacccaatcctggagg
gagatcctgggaactccaccgcccatcggcaccactaaggaggaacgcctgctgtggctc
cgctaccataagaaaaagtgggagcttcaggctcgtcagcgccaggagcgccggaagaag
cggaggctggccgatggagaagccgtcctggggggtggagtgattcgagctgggccctcc
aaagggctgagcaattacttgcgcaagaccgcccggagtatccttgacatgccctggcag
atagtacagattgctgagactggccagccaggcctcttcaagctatgggctgtgattgag
agtgatctctattgcctcaaactgaatgtcccacgtatcttctatatcaaccagcgtatt
cctaaacctgaagagagcatggtctatagaaaggtgaatcgaattcttccccgttccagc
ttggtgttcaacctgtacgagtactcagtgcctgaagatatgtacctggagcgcatcaat
gagatcaatgccagcctttctgctccagacattgagggggtttatgagacccaggtgcca
ttactcctccgggccctggttcacctgggctgcgtctgcatggtgaataagcatttggtg
aggcacctgagtggccgggaagccgagacctttgacctggagcacctggagaggaagtct
ctggcacagttcagctacctggagcccgggagcatccggcacatctacctctaccaccac
tcccagggcagcaaggccttgctgggcctcttcatcccctcccagcgcaaagcctccatt
tttgtgctcgatacagtgcgcagtaaccagatgcccaacctcggcaccatgtattctgct
gagcatgcttccatggtggagaagataggccaagagctgctccctccagccaagcacatc
tttgaagttcgagctgaaacggatctcaagagcatctgcagagcgctccagcgcctcctg
atgggctacaaggatgagcgcaggggccccaccctcatcgctgtgcagtctaactgggat
ctgaagaggctggtcagtgggatgccggtcctggaggagttcccgctggttcctatgcac
gtggcagatgacatcagctacagcatattggactggcagcgccacggggcccggcacttg
atccgccgctacctcaagttggacatgtgtctgtctcaggcctttgacatgagcaggtac
tatcacctccccattgggaaccttccagacgacatctccatctttggcacggatctcttt
ctctctcggcatctccatcgccacaaccacctcctctggctctctcccacctcccgcccg
gacttggggggcaaggaggccgacgatagccgcctagtcatggagttcgatgaaagggcc
tctgtcgagatcaaccacccaggctgttattcaacagtgtgtgtggagctggacctccag
aacctggccgtcaacaccatcctgcagtcccaccgcatcaacgacatggagggggcctcc
agcatgtgcatcagcttcgatgtcatccagcaggcctccctggaggatatggtcgtgggc
aaccaggcggccagcgtccccgccagctacgatgagactgccctctgctccaacacgttc
aggatcttgaaaagcttggtggtgggctgggtgaaggagatcacgcagtaccacaacgtc
tacgcggacaatcaggtgatccacttctaccgctggctgcgctccccaaactccctgctc
tacgatcccgccctgcaccggacgctccacagcatgatgaagaagctctttcttcagttg
gtggcagaattcaagcgcctcggctccttagtcatttacgccaatttcaaccggatcgtt
ctgtgcaccaagaagcgccacatcgaagatgccctggcctacgtcgagtatatcaccaac
agcatccattcaaaagagctcttccactcactggctatttccttttcctgttgttgggag
tttctgctgtggatggaccccagcaatcacggtgggatcaagggcaaagtgccgtcccgg
acccactgcgaagaggcacggaggagtaaacagacagcagaggtagccaacaatgaagaa
gaggaggaggaggaggacgacgacgaagaagaagacttgggagaaaacggtatagagaat
cgcctggaaaacaactggaacatcatgcagtatttaccacaagctgcttcctgtcagaat
tacttccttatgattgtgtcggcgtacatcgttgctgttcaccacagcctgaaggaggaa
atgcagcgggacacctccggaggcagccctgtcaggagacgagccagcagccaaacctcc
caggaggctctcggggaaacgggcaccatgccaggcgccattgctttctcgcaggagtat
gtctccaacgagctcacccagagcttcttcaccatcactcagaagatccaaaagaaggtc
accggctctcgccacaccacagagccctcggagatgtttccatccttgcccggctcacac
ctgacgctcaacaatcctgccctggagttcatcaagcacgtctgtcaggtgctgtctctg
gatgccaacatcaccaaccaggtgcagaagctgaagcgggacctgctccgtctcattgac
gtgggcgaattctccgaggacgcccacttccgggacccctgctgctcctacgtcctcccg
gaggtgatctgcagaaactgcaacttttgcagagacctggatctctgcaaggaccctgcg
ctctttcaggagggctccctgccgcccagctggctgtgctccaattgccagtctcagtac
gactccgatgccatcgaggtggctctggtggaagccctgcagaagaagttgatggccttc
accttgcaagatctggtgtgcttgaagtgcaaaggcatcaaggatactcacatgcccgtg
tactgcagttgtgctgggaactttgacctccttctgcccaccaagagcttcctggatcat
ctgaaggttttccagggcatcgctcggcattacggaatggcccacttgctggagaatgtt
cagtggctgcttcaaatgaaccctcagcttctctcctga
DBGET
integrated database retrieval system
