Crotalus tigris (Tiger rattlesnake): 120316828
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Entry
120316828 CDS
T08476
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04010
MAPK signaling pathway
ctig04020
Calcium signaling pathway
ctig04144
Endocytosis
ctig04510
Focal adhesion
ctig04540
Gap junction
ctig04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120316828 (PDGFRA)
04020 Calcium signaling pathway
120316828 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120316828 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120316828 (PDGFRA)
04540 Gap junction
120316828 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120316828 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ctig01001
]
120316828 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ctig04090
]
120316828 (PDGFRA)
Enzymes [BR:
ctig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120316828 (PDGFRA)
Protein kinases [BR:
ctig01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120316828 (PDGFRA)
CD molecules [BR:
ctig04090
]
Proteins
120316828 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
VEGFR1-3_N_Ig-like
DUF6232
Motif
Other DBs
NCBI-GeneID:
120316828
NCBI-ProteinID:
XP_039218830
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MGPSRKEFLVLGYLLAGSCIISCQSLLPAILPSEEQMVVQLNAPFTLKCSGDSEVSWQHP
APEGNHSITIRNEENNSGLFVTVLEVANASASLTGLYICYYNHSQEEDGEVEGKEIYIFV
PDPAVPFVPTSPEDLFIVASEEDNSSIIPCRTTDPNTQVTLMNREGKILYASYDNRLGFI
GNFSLGSYICKTTVRAVNFESGEFFIYVYKAPSYLHVEIESPKTVYKTGETIIVTCVVLD
NEVVNLEWNYPGKVKNKGIISLDDIKVPAQKLIYNLTIPDASVKDSGDYECAVRHVTKDF
KKMERIAIYVHDKGFIHLEPHFKPAEAVNLHEVKNFVIYVYAYPEPRLFWLKDNVTLMEN
LTEIVTSSKQIQETRYQSVLKLIRAKEEDSGYYTLVAQNEDEIQRYTFSLLIQVPALIRD
LVDNHHGSVGQTVKCLAEGTPLPDVEWLVCKDIKKCNNDTSWTLLTNNISDVTVETHLDE
RNMVASQVTFQKVEDIMAVRCMAKNDLRTVTRELKLVAPTLRSELTVAAAVLVLLVIVII
ALIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKAKKDLDIFGMNSADESTRSY
VILSFENNGEYMDMKQADTTQYVPMLERKDKSKYSDIQRSLYDRPASYKKKSILDGKNLL
SDDNSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARD
IMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVD
STFYNKIKSGYRMTKPDHATSEMYDIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKKSY
DRIHLDFLKSDHPAVTRMRVDCDNPYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIPLP
DIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFVKREDETVDDIDIIDDIGMDSSELV
EDSFL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgggtccttcccgaaaagaattcttggtcttgggctacctccttgcagggtcatgcatc
atctcctgccagagtttgcttcccgctattctcccaagtgaagagcaaatggtggtgcag
ctgaatgcccccttcactttgaaatgttctggagacagcgaagtgagctggcagcatcca
gccccagaaggcaaccattccatcaccatcagaaatgaagagaacaacagcggccttttc
gtgaccgtcctcgaagtggcgaacgcatcggcttccctcaccggattatacatttgttat
tataatcattcccaagaggaagatggagaagtcgaagggaaagagatctacatttttgtg
ccagatccagctgttccctttgttccaacctccccagaagatttgttcatcgttgccagc
gaggaagacaattcttccattatcccatgtcgcacgactgaccctaacactcaagtcact
ctaatgaacagagaaggaaaaattctgtacgcctcgtacgacaacaggctgggcttcatt
ggaaacttctctttggggtcctacatatgcaagaccactgtcagagccgttaactttgag
tctggcgaatttttcatctatgtttacaaagctccatcataccttcatgttgaaattgag
tcccccaagactgtatataaaacaggagaaaccattatcgttacttgtgtggtcttggat
aatgaagtggtgaacctagagtggaattatccggggaaagtgaagaataaaggaataatc
tcccttgacgacatcaaagttccagctcagaagctgatttataatttaaccattccagat
gcatcagtgaaggacagcggagattatgaatgtgctgttagacacgtgactaaagatttt
aagaaaatggaaaggattgccatctacgttcacgataaagggttcattcatttggagccc
catttcaagcccgcggaggccgtcaatctacacgaagtcaaaaactttgtaatttatgtc
tatgcatatccagagccaaggttgttttggctaaaggacaacgtcacactgatggagaat
ctcacagagattgtaaccagttccaagcaaatccaagaaaccagatatcagagtgtatta
aaattaattcgtgccaaggaagaagacagtggatattatacactggtagcacagaatgag
gacgaaattcaaagatacactttctccctgctcatacaagttccagctttaattcgggac
ctggtagataatcaccacggctctgttgggcagacagtcaaatgtttggcagaagggaca
cccctccccgatgtggaatggctggtttgcaaggacattaagaaatgcaacaatgacacc
tcatggaccctcctgaccaacaatatctctgacgttacggtggagactcatcttgatgag
aggaacatggtagccagccaggtgacttttcagaaggtggaagacatcatggctgttcga
tgtatggctaagaatgaccttcgtactgttacaagagaactaaagcttgtggctcctaca
ttaagatcggaactcacggtggcggcagctgtcctcgtgctcctggtgattgtaataatc
gcgctgattgtcctggtgatcatatggaagcagaaacccagatatgagatcagatggaga
gtcattgagtcgatcagtcccgatggccacgagtacatctacgtggatcctatgcaattg
ccctatgactcaagatgggaatttcctagggatggattggtgctaggccgaatccttggc
tctggagcttttgggaaagtagtggaaggaaccgcatatggattaagccggtcacaacca
gtgatgaaagtagctgtgaaaatgttgaaaccaacggcaaggtccagcgaaaagcaggct
cttatgtctgaattaaagataatgacccatcttgggccccacttgaacattgtcaacctg
ttaggagcctgcacaaaatcaggtccaatatacatcataacagagtactgtttttatgga
gacttggtgaactacctccataaaaatagggataattttctgagtcggcacccggaaaag
gcgaagaaggatctggacatttttggcatgaattctgcagatgaaagcacgagaagctat
gtcatcctgtcctttgaaaataatggtgaatatatggatatgaaacaagcagacacaact
cagtatgtgcccatgttagaaagaaaagacaagtcgaaatattctgacatccagagatct
ttgtatgatcggcctgcttcatataagaaaaagtctatattggatgggaagaatctgctt
tctgatgataattcagaaggcctcagtttgttggaccttctgagcttcacctaccaggta
gctcggggaatggagttcctggcttcaaaaaactgcgtgcaccgtgatctggcagcacgc
aatgtcctcttggctcaagggaaaattgtgaagatctgtgactttgggctagcaagagat
atcatgcacgattcaaactatgtctccaaaggcagtaccttccttccagtgaaatggatg
gcacctgaaagcatttttgacaacctgtataccacattaagtgatgtctggtcctatggc
attcttttatgggaaatattttctcttggtgggaccccataccctgggatgatggttgac
tctaccttctataataaaataaaaagtggctatcggatgacaaaaccagatcatgctacc
tctgagatgtatgacatcatggtgaaatgctggaatagtgagcctgaaaagagaccatct
ttttaccacttaagtgaaatagtggagagtctgttgcctggtgaatacaagaagagttat
gatagaatccacttggacttcttaaagagtgatcatcctgccgtcacacgcatgagagtg
gactgtgacaatccatatattggtgtcacttataagaacgaggacaagctgaaagacagg
gagagtggatttgatgaacaaagactcagtgcagacagtggctatataatcccgctgcct
gatattgaccctgtatcagaagatgaactggggaaaaggaacagacacagttctcagact
tctgaggaaagcgccattgaaaccggatccagcagctctacgttcgtgaagcgagaagac
gaaaccgtggatgacattgacattatcgatgacattggcatggattcctcagaactagtt
gaggacagcttcctgtaa
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