Crotalus tigris (Tiger rattlesnake): 120316868
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Entry
120316868 CDS
T08476
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
ctig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120316868 (SRRM1)
03015 mRNA surveillance pathway
120316868 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120316868 (SRRM1)
03041 Spliceosome [BR:
ctig03041
]
120316868 (SRRM1)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120316868 (SRRM1)
Spliceosome [BR:
ctig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
120316868 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
120316868
NCBI-ProteinID:
XP_039218914
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEDKENREKRDRSRSPRRRKSRSPS
PRRRSSPVRKERKPSHSRSPHHAAKSRSVTPPPVKKEETPEPEPSVKVKETLIQEATSTS
DILKVSKIEPMPDTKEISPERVSKKEREKEKEKARPRSPSRSRSRSKSRSRSPSHSRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRIPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRVVSSPPRKTRRLSPSASPPRRRHRPSPPPSPPPKPRRSPTPQQ
SNRTRKARGSVSPNRTSASKHKSIEKRESPSPAPKTRKVELSESEEDKSGKMATADSVQQ
RRQYRRQNQQSSSDSGSSSSSEEERPKKSNVKNGEVGRRRRHSHSRSPSPSPRKWQKESS
PRMQMGKRWQSPIVKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSPPRRRSPSPPPRRH
SPTPRRYSPPIQRRYSPSPPPKRRTASPLPKRRASPSPQPKLRVSRSPPPKRSSPPAKRR
SPSASSKHRKSSPPSRSIREPRSPLQNKRHSPSPQPRPLRTSASPPLLRRGPSSSPQRRQ
SPSPSSRPIRRVSRTPEPKKSKKASPPSPHSVRRGSSSRSASASPEPSPKKHPAPPSPAR
SASPSAHWSPVAPAKKAKSPTPSPSPVRISDQEGGGKKKKKKKDKKHKKDKKHKKHKKHK
KEKAAVAAAMATFTTSAEENQEKNVEPKKETESEAEDNLDDLEKHLREKALRSMSMRKAQ
ASPPS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaggcttttttcgcggtacaagtgcagaacaggataatcgcttcagcaacaaa
cagaagaagctactaaaacaactgaaatttgcagaatgccttgaaaagaaagttgacatg
agcaaggtaaacctggaagtaatcaagccatggataacaaagagagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaatcagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacttgactggctttttgaatgggaaaaatgcgagagaa
ttcatgggagaactgtggccactgctgttaagtgcacaagaaaacattgctggtattcca
tctgcttttctggagctgaagaaagaagaaataaaacaaagacagattgaacaggaaaaa
ttggcttcaatgaagaaacaagacgaagacaaggataagcgagacaaagaagataaagag
aacagagaaaagcgggaccgctctcggagccctagaagacgcaaatcgagatctccttcc
cccagaagacgctcatctcctgttaggaaagagaggaaacctagccattctcgatcaccc
caccacgcagccaaaagtcgcagtgttacacctccaccagtaaagaaagaagagacacca
gaaccagaaccttccgtcaaagtaaaagaaacgttgatccaagaggccacatctaccagt
gatatcttgaaagtcagtaaaattgaacctatgccagatactaaagaaatatctccagaa
agagtttcaaaaaaagaaagggaaaaagaaaaggagaaggctcgtccaagatctccatct
cgatctaggtcaagatcaaagtctcgatcgcgttccccatctcattcgagaccaagaaga
cgtcatagatcacgatccaggtcttattcaccaaggaggcggcctagcccaagaagacgc
ccatctcctcggagaagaactccaccgagacgtattccacctccacccaggcataggagg
agcagatctcccgtgaggcggaggaggaggtcatcagcgtcattatcaggaagtagttca
tcctcatcatcctcccgttctcgatcaccaccaaagaagccacctaagagagttgtctct
agccctcctcggaaaacaagaaggctttctccttctgccagccccccaagacgaagacac
cggccctccccacctcccagtcctccccccaaaccccgtaggtcaccaacaccacagcaa
tctaaccgtacaagaaaagcccgtggctctgtttctcccaataggacttcagcatccaaa
cacaaaagtattgaaaagagagaatctccctcgcctgcaccaaaaacaagaaaagttgaa
ttgtcagaatcggaagaagacaaaagtggtaaaatggcaactgcagactccgtgcagcaa
agacgacaatacagaaggcagaaccagcaatcttcatctgattctggttcatcatcatct
tctgaagaggagcgaccgaaaaaatcaaatgtgaaaaacggtgaagtgggtagacggagg
cggcactcacattcccgcagcccatctccttctccacgaaagtggcagaaagaatcttct
cctcggatgcagatgggaaagaggtggcagtcaccaatcgttaaaagtcgaaggaggcga
agtccctccccaccaccagccagaagacgacggtctccttctcctgccccccctccaagg
cgtcgcaggtcaccgtcgcccccacggcgaaggtctccttcgccaccccctcgccggcat
tcgcctacacccagaagatactcgcctcccatacagaggaggtattctccttcccctcct
ccaaagaggcgaacggcatctcctctcccgaaaagaagggcttctccttctccgcagcct
aagctcagagtctctcgctctccaccgccaaaacgaagttctccacccgcaaagagacgc
tcaccatctgcatcttctaagcacaggaaaagctcccctcctagcaggtccatcagggaa
ccccgctccccactgcagaacaagcggcattcaccttccccacagcctaggcctttacgg
acctctgccagccccccattgttgcgcaggggtccttcttcatcaccccagcgaaggcag
tcgccgtctccaagctctagacccatcagaagagtctcaaggactccagagcccaagaag
tcaaagaaggcttctccaccaagtccccattctgtgagaaggggatcctcatctaggtca
gcttcagcatcccctgaaccatcccccaagaagcatccagcacctccatctcctgctcga
tcagcatccccttctgctcactggtcaccagtagcacctgcaaagaaggctaaaagccca
acaccaagcccctcaccagtacgaatttctgatcaggaaggaggtggtaaaaagaagaag
aaaaagaaggataagaagcataaaaaggacaagaagcacaagaaacacaaaaagcataag
aaagaaaaggctgctgtagctgctgcaatggctacttttacaacatctgcagaggaaaat
caagaaaaaaatgtggaacctaaaaaggagactgagagcgaagcagaggataacctggat
gacttggaaaagcacctacgggagaaagctctgaggtcaatgtcaatgaggaaggcgcag
gcatctccaccgtcttag
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