Crotalus tigris (Tiger rattlesnake): 120317026 Help Entry 120317026         CDS       T08476                                  Symbol NXF1 Name (RefSeq) nuclear RNA export factor 1   KO K14284   nuclear RNA export factor Organism ctig  Crotalus tigris (Tiger rattlesnake) Pathway ctig03008   Ribosome biogenesis in eukaryotes ctig03013   Nucleocytoplasmic transport ctig03015   mRNA surveillance pathway ctig05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:ctig00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     120317026 (NXF1)    03015 mRNA surveillance pathway     120317026 (NXF1)    03008 Ribosome biogenesis in eukaryotes     120317026 (NXF1)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     120317026 (NXF1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ctig03019]     120317026 (NXF1)    03009 Ribosome biogenesis [BR:ctig03009]     120317026 (NXF1) Messenger RNA biogenesis [BR:ctig03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      120317026 (NXF1)    mRNA cycle factors     Stress granule specific factors      120317026 (NXF1) Ribosome biogenesis [BR:ctig03009]  Eukaryotic type   Pre-60S particles    Export and cytoplasmic maturation factors     120317026 (NXF1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_8 UBA_8 LRR_4 LRR_9 Motif Other DBs NCBI-GeneID:  120317026 NCBI-ProteinID:  XP_039219191 LinkDB All DBs Position Unknown AA seq 738 aa AA seqDB search MSMVAKAARKEEGSDTRLCGLRSDLPPRGALSGSPSPRLRATCRTCASGDLERRLLRARG GRRKAAVAAAKDSQRRLSSLPLERSCGRQPFSEVPANGAPFMADGGKGGYSEHDDRVGGS NRSFGRRRKGRVPFRGKMYSEMGHHQRGWNSSGSGPRSWLDDDDGDVLMSDAHEVLRTRY TPYGSRPHRPDRGTPSLMNAIVRRNLNIGDRAPAHKGPVSKKTWFKITIPYGRKYEKSWL MNAIREICSVPFDPVEFHCVNNRVVFYVEETSVANALKQISRKICSPDGYKVAILINACN PPTTVQHELKPEDIEQLKQCMSKRYDSSHQALDLKNIHADPDLIAQNIDIVLNRRNCMIA VLQIINDNIPELLSLNLSDNKLYRLDDMSELHQKAPNLKILNLSCNQLKTEHELDKLKGL KLVELWLENNTLCDNFRDRSVYISAIRERFPKLLRLDGHELPPPISFDVETPTTLPPCKG SYFASEGLKMLIVRFLQQYYAIYDSGDRQGLLDAYHEGACCSLSIPFSVNHPYRNSLAEY FKNSRNVKRLKDPSMRFRLLKHTKLNVVAFLSELPKTQHDVNSFVVDVCAQTNSLLCFTL SGIFKEVDSRCRDLVRAFTRVFIAVPVGHSGLSIVNDQLFIRKANNIEIRKAFVMPAPTP SSSPVPTPSAEPMPSSSPGPTLTAEQQEMLQNFSLQSGMNLEWSQKCLLDNDWNYAKAAH AYTQLKAEHKIPEVAFIH NT seq 2217 nt NT seq  +upstreamnt  +downstreamnt atgtctatggttgcaaaagcggctagaaaggaggaggggagcgatacgcgcctgtgcggc ctgcgttccgaccttcccccgcgcggcgcgctctccggaagtccctcaccgcgcctgcgc gctacctgccgcacatgcgcatcgggcgatttggagcgacgcctccttcgtgcgagaggg gggaggagaaaggcggcggttgcggcggccaaagactctcagaggcgcctctccagcctt ccgctcgagcgctcgtgtggcaggcagccgttctccgaggtgcccgccaacggggctccc ttcatggccgacggcgggaaaggcggatacagcgaacatgacgaccgggtgggtggcagc aacaggagctttgggcggaggagaaagggccgtgtccccttccggggaaaaatgtacagt gagatgggccaccaccagcgcggctggaacagttctggctccggccctcgtagctggctt gacgatgacgatggggacgtcctcatgagcgatgcccacgaagtgctccggacacgctat actccttacgggtcacgtccgcaccgaccagaccgagggacgccgagccttatgaacgcc atcgtgagacggaatctgaatattggagaccgtgctcctgctcacaaggggccagtcagc aagaagacttggttcaagattacgattccttacggaaggaaatacgaaaagagttggttg atgaacgcaatacgagaaatttgcagcgttcccttcgaccccgttgagttccactgcgtg aacaatcgggtggtgttttacgtggaggagacttccgtggccaacgcccttaagcagatt tctcggaaaatctgttctccagacgggtacaaggtggcgatactgataaacgcctgcaac ccacccaccactgtccagcacgaactgaaaccagaagacattgagcagctgaagcaatgt atgagtaaaagatacgatagctcccatcaagcgttggatctgaaaaatattcacgcagat cccgatctgatagcccaaaatatcgacattgtgttgaaccgccgaaactgtatgattgct gtgctgcagatcatcaacgacaacatccccgagctcctgtccctcaatctgagcgacaac aagctgtaccgtcttgacgacatgtcggagctgcatcagaaagctcccaatctgaagatc ctcaatttatcttgtaaccagctgaagaccgaacacgagctggacaagctgaaaggttta aagctggtcgaactctggctggagaacaacaccctgtgcgacaactttcgggaccgctcc gtttatatcagcgccatccgagaacggttccccaagctgctgcgtctggacgggcacgag ctgcccccgccgatctccttcgatgtcgaaacgccgaccactttgcctccctgcaagggc agttattttgcctcggaaggcttgaaaatgctgatcgtccgttttttgcaacaatattac gccatctacgattctggcgaccggcaagggctgctggatgcctatcacgaaggggcctgc tgttcgctgagcatccccttctccgtgaatcacccttacaggaactctttggctgaatat ttcaaaaacagccggaacgtgaagcgactgaaggatccttccatgcgcttcaggctcctc aaacacaccaagttgaacgtggtggctttcctcagcgagttgcccaagacccagcacgac gtgaactccttcgtggtggacgtctgcgcgcaaacgaattcgctgctgtgttttaccctg agcggaatctttaaggaagtggattcccggtgtcgggacctggtccgcgccttcacccgg gtcttcattgctgttccggtgggccacagcgggttgagcatcgtgaacgaccagctcttc atccggaaagccaacaacatagaaatccgcaaagccttcgtcatgccggcccccacccct tcctccagccccgtgcctaccccctcggccgagcccatgccctcttccagccccgggccc accctgacggccgaacagcaggaaatgctgcagaatttctccttgcagtcgggcatgaac ctggagtggtctcaaaagtgcctgttggacaacgattggaactacgcaaaagcggcccac gcctacacccagctgaaggctgagcacaagatccccgaagtggcgtttatccactga

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