Crotalus tigris (Tiger rattlesnake): 120317105
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Entry
120317105 CDS
T08476
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120317105 (DENND4B)
Membrane trafficking [BR:
ctig04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120317105 (DENND4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
DUF2464
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
120317105
NCBI-ProteinID:
XP_039219355
LinkDB
All DBs
Position
Unknown
AA seq
1503 aa
AA seq
DB search
MAEEWAPQLVDYFVVAGLVDTSKSLEDENQASRPARPSEPIVDVAVIVRSQGEEVPHGFT
CIDRTTTGHPVELNTSLLNNPQMFICYRRGRDKPPIVELGVHYGGKDQPKPGYKIIDTTP
YSHSANLASGAPGHQHTFLTYRRASEGQTYSALGITDICLIMPSKAESTPHTFCRVDRNL
NAGMWGPALYICYKMALAKGNTLVYEAGLLSRYPEEDNEVFPLPESVPVFCLPMGATIES
WPAEAKYQLPIFSTFVLTGASGDKVYGAAMQFYESFPRERLTERQSMCLNLLTVVDRRPI
TNKSVQTRKSICVLSHWPFFDVFRKFLTFIYRYSISGPHVLPLEAHISHFMHNVPFPSPQ
RPRILVQMSPYDNLLLCQPVSSPLPLSGASFLTLLQTLGPEHTVALMVAVLTEHKLLIHS
LQPDVLTSIGEALVSMIFPLRWQCPYIPLCPLTLADVLCAPVPFIVGVHSSYFDIYDLPR
DVICVDLDTNTIFQCEERKLLSSRSLPRKLCKVLLASLNSHYQQLDEMYNRPVEEASLEF
LLTDYDVIYGRRKQLELDIRGAFLRFMACLLKGYRSYLRPITQAPSEKTRDSSSLFFLQG
FLKSRERAYQKFYGQLLRTQLFTQFIEECSFVSDRHACLEFFDSCVDKVQVDLEKAEETP
LIELDDVQGSEHTVFIMPPEEPTGPNGLELLPSYKYDGFPMLQTKLFQRPQDQLMPPLCQ
ARTSAPSSPAPRRTQQEIKVAQKVAQKYSSVPDMWAKCLLGHCYALWFITLPAYVRMVAP
KVQALHVAYEVLKQMETKEVVLPDEVCYRILMQLCGQYGQPILSVQVMLEMKRAGIVPNT
ITYGYYNKAILECKWPSSSHGGRLRWAKLRNVVLGAAQFRQPLRQRQHQQQEVELQSFGL
PTDSKEAKFPKYQPRTGLQRQTTWSGSSLRENPQPASLAKSGSLTFPKQETPAGIIPARK
TLGSPRAESNNMLSTLPPWLRGARDGPGSSEGSSLSDISSFLTDESDRLTLSSVETGQPE
GATPGSGQATENRRLGSTPRRSLTAKLQQFLSPIKRPSLKHGSSGELSHGRGGSEQREYS
SRQSLLEGHLLLPPERPRSTASESSASLGSEYDLSDTSVCSFNLRKSSDRLSEPPAVEVL
LSSCSRCQACNLLVYDEEVMAGWSSDDSNLNTTCPFCGRLFVPFLSIEIQDFQMVSLSNA
DASDTSSVSSDWPRDNEAPLPGSQGPVLSDRSQCLLLDEAETDPRRKSRNGSLCNGFSEP
PGPQGPAIHVEQLAFAYLSPLVLRKELETLLENEGAVFLSQPELVDNHPIIYWNLVWYFQ
RLGLCSGLPQLLLASKHVQMASQVPTPEGPFVNVRLLWDVLSSDPDSFPPLYVLWRLHGQ
IPTRLQNWRKHNHPFSLSFLEAVINYLGLGEVHKAIVLFIEKVAGCANPGLLQRSIYREF
LFLKIAALGRERVDIAEFDKKYKSAFSKLASSMGKEPLKQQRAQPLTTKAIDCRKSFGAN
LEC
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagtgggccccccagttggtggactacttcgtggtggctggcctggtggac
acctccaaatcgctggaggatgagaaccaggcctcccgtccggcccgcccgagcgagccc
attgtggacgtggccgttatcgtccgctcgcaaggcgaagaggtgccccacggcttcact
tgcatcgatcggaccaccacggggcacccagtggagctcaacaccagcctgctgaacaac
cctcagatgttcatctgctaccggcgggggcgggataaaccccccattgtggaactgggg
gtgcattatggtgggaaggaccagcccaaaccgggctacaaaatcatcgacacgacgccg
tacagccactcagcgaacctggcctcgggtgcgcctggtcaccagcacactttcctgacg
taccggagggccagcgaggggcagacatacagcgccttggggatcacggacatctgcctt
atcatgcccagcaaagcggagagcacgccgcacactttctgccgggtggacaggaacctg
aacgccgggatgtggggtccagccctctatatctgttacaagatggcactcgctaaaggg
aacaccctggtctacgaagcaggtctcctcagccgctacccggaggaggacaacgaggtt
ttccccctccccgaatcggtgcccgtcttctgcctccccatgggggccaccatcgagagc
tggccggccgaggcaaagtaccagcttcccatcttctccaccttcgtgttgactggtgct
tcaggggacaaggtttacggggctgccatgcagttttacgagtcctttccccgggaacgc
ctcaccgagcggcagtccatgtgcctcaacctcctcaccgtggtggaccggcgccccatc
accaacaagtccgtgcagacccggaagagcatctgcgtcctgtctcactggcctttcttt
gacgtcttccgcaaattcctcaccttcatctaccgctacagcatctccggaccccacgtg
ttgcccctcgaggcgcatatttctcacttcatgcacaacgtccctttcccgtctccacag
agacctcggatcttggtccagatgtcgccctacgacaatctgcttctttgccaacctgtc
tcgtccccgttacctctcagtggggccagctttctcaccctccttcagaccctgggcccc
gaacacaccgtggccctaatggtggccgtgttgacggaacataagctcctcatccattcc
ctacagccggacgtcttgaccagcatcggagaagcgttggtctcgatgatttttcctctg
cgctggcagtgcccgtacatccctctctgcccgctcaccctggccgatgtgctgtgtgcc
cccgttcccttcatcgtgggggtccactccagttacttcgacatctacgacctcccgcgc
gacgtcatctgcgtggacctggacaccaataccatcttccagtgcgaagagcggaaactg
ttgtcatcacgctctctaccccggaagctgtgtaaagtgctgctggcgtcgttaaactcg
cactaccaacaactggatgagatgtacaaccgtcctgtggaggaggcctccttggagttc
ctgctgaccgactacgacgtcatttacgggcgccggaaacagctggaactggacatccga
ggggcgtttctacgattcatggcttgtcttctgaaaggctatcgtagctacctccgaccc
atcacccaggccccttcggagaaaacccgggactccagcagtctgtttttcctgcaaggc
ttcctgaagtcccgcgagcgagcctaccaaaaattctacgggcagcttttgcgcacgcag
ctcttcacgcagtttatagaggaatgctctttcgtcagtgaccgccacgcttgcttggag
tttttcgattcttgtgtcgacaaggtgcaggtggatttagagaaagcagaggagactccg
ctaattgaattggacgacgtccagggcagcgaacacaccgtgtttattatgcccccggaa
gagcccaccgggcccaacggcttggagcttctgccgagttacaaatatgacggcttcccc
atgctccagaccaagctgtttcagcggcctcaggaccagctcatgcccccgctgtgccaa
gcccgcaccagcgcccccagcagccctgcccctcgccggacccagcaggaaattaaagtg
gcccagaaagtcgcgcagaaatattcctctgtgccggatatgtgggctaagtgcctgctg
ggtcactgctatgctttgtggtttatcacgctgcctgcctacgtccgaatggtggcgccg
aaggtacaagcactgcatgtcgcatacgaagtgctgaaacagatggagaccaaagaggtg
gtcctgccggacgaggtgtgttaccgtatcctgatgcagctctgcggccagtacgggcaa
ccaatactctccgtccaagtcatgctggaaatgaaacgggccgggatcgtccccaacacc
attacctacggctattacaacaaggccattttggagtgcaagtggccgtccagtagccat
ggtggccgtcttcgctgggccaagctccgcaacgttgtcctgggggccgcccagttccga
cagcctctgcgccaacgtcaacaccagcagcaggaggtagagttgcagagtttcggcctt
ccaacagacagcaaagaagccaaattccccaaatatcaaccccgcaccggcttgcagcgg
cagaccacctggtccgggagcagcttacgagagaatccacaacctgcttccctcgcaaag
agcggcagcctgacttttcccaaacaggaaacgccggcgggcataatcccagccaggaaa
acgctgggtagtcccagagctgaaagcaataatatgctgtcaacacttcctccctggctg
cgcggtgcacgggacgggcccggaagttcggagggcagcagtctttccgacatcagcagt
ttcttgacggacgagagcgacaggttaacactgagcagcgtggagaccggacaaccagag
ggagctactccagggtcaggccaggctactgaaaaccgtcgcctggggagtacccctcgc
cggagtctgactgctaaacttcagcagtttctgtcccccattaagcgaccgtctctgaag
cacggttccagcggggagctctcacacgggcgcggcggatccgagcagcgagaatactcc
tctcgccagagtctgctggagggtcacttactgctccccccggaacgtccaagatccaca
gcctcagagagttcggcctctctgggtagcgagtacgatctctcggatacgtccgtctgc
agtttcaacctccggaaatccagtgatcggttgtcggagcctccggcagttgaggtgctt
ctttccagttgttcgcgatgccaagcttgcaatttgctggtgtacgacgaagaggtgatg
gccgggtggagttcggacgactccaacctgaacaccacctgccccttttgcggacgtctc
tttgtgcccttcctcagcatcgagattcaagatttccagatggtttctctcagcaacgct
gatgcttctgacacaagttcagtgtcctccgactggccccgggacaacgaagcccccttg
ccagggagccaaggcccggtgctcagcgatcggtcccagtgcctcctgctggacgaggca
gagacagatccccggcggaaatccaggaacgggtccctatgcaacggcttcagcgaaccc
ccggggcctcaggggcctgccatccacgtggaacagctggcgttcgcctacctcagcccc
ctggttctgcgtaaggagctggagaccctcctagagaacgaaggagctgtgttcttatct
cagccagagctggtggacaaccatcccatcatctactggaacctggtgtggtatttccag
cggctgggcctctgcagcggcctgcctcagttgcttctggcttccaagcacgtccaaatg
gcctcccaggtgccgactccggagggccctttcgtcaacgtacgcttgctctgggacgtg
ctgagttccgatcccgacagctttccccctctctacgttctatggaggctgcatggccag
attcccacacggttgcagaattggcgcaagcataaccacccattctcgctctccttcctg
gaagccgtcattaactatcttggcctgggcgaggtccacaaagccatcgtcctcttcata
gaaaaagtggcaggttgtgccaaccctggactcttacagaggagcatttaccgtgaattt
ctctttctgaaaatagccgcgctgggcagagagcgagtggacatcgctgaatttgacaag
aagtacaagtcggccttttcgaagctggccagcagcatggggaaggagcccctcaagcag
cagagggcccagcctctcaccaccaaggccatcgattgccggaagagttttggggccaac
ctggagtgctag
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