Crotalus tigris (Tiger rattlesnake): 120317265 Help Entry 120317265         CDS       T08476                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism ctig  Crotalus tigris (Tiger rattlesnake) Pathway ctig04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ctig00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     120317265 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ctig00536]     120317265 (COL3A1) Glycosaminoglycan binding proteins [BR:ctig00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120317265 (COL3A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  120317265 NCBI-ProteinID:  XP_039219645 LinkDB All DBs Position Unknown AA seq 1458 aa AA seqDB search MMSCVQRAVLFFFTVSQFSVILAQQQEVEFGECSHLGQLYADRDVWKPEPCQICVCDSGS VLCDDIRCIEEELPCANPEIPFGECCPVCPTATDSPPDGTRVQGPQGPRGEPGTPGTPGR NGSPGTPGLPGDPGQPGPPGVCQNCPSFTGNNFSPQYDYDVKAGPGPGVITGGTGFPGPP GPSGPPGPVGQPGSPGPHGYQGQPGEPGQAGAPGAPGPPGMIGPPGPSGKDGEPGRPGRP GERGLPGLPGHKGPSGMPGMPGMKGHRGFDGRDGSKGDAGAPGLKGENGLPGENGSPGPM GPRGLPGERGRAGPPGTSGGRGNDGSPGAAGQPGPPGPPGPSGFPGTPGFKGETGPPGSA GSSGPPGPKGDAGPPGQSGGAGPPGPGGRDGNPGAKGPPGAAGIPGAPGLSGARGPPGPS GVNGIPGQRGPSGEPGKNGAKGEPGARGERGENGTPGGAGPPGEEGKAGAPGQPGTNGVP GAAGERGSPGFRGPAGANGAPGEKGPPGERGGPGSTGPRGVPGEPGRDGSPGLPGMRGLT GSPGGPGADGKPGPSGSPGESGRSGPPGPAGPRGQPGVMGFPGPKGNEGSPGKNGERGSS GPPGGPGLPGKDGESGAQGPPGPAGGPGERGEQGATGPPGFQGLPGPSGAPGESGKPGDP GPKGENGVPGLPGGKGENGIPGERGTPGPAGPPGARGGPGPAGPEGGKGPGGPTGPPGGM GPPGLQGMPGERGASGNPGPKGEKGEPGGRGGDGVPGKDGLRGPVGSIGPPGPSGQPGDK GEPGPAGPHGPSGPRGGPGDRGEHGPPGPAGFPGAPGQNGEPGGKGERGLPGERGESGPP GIAGPSGGPGAQGPAGSAGPKGERGGPGPAGSPGFPGSRGLPGPPGNSGASGPPGNAGPP GKDGHSGPPGSTGPPGPPGGSGPKGEPGAPGEKGTPGAKGSDGIPGPAGNTGIPGQRGIV GLPGTRGPSGSPGPAGPKGEDGKPGSNGSPGERGSPGPGGSPGLSGAPGEPGRDGNPGSD GLPGRDGSPGPKGDRGENGPAGVPGSPGHMGPPGNAGAPGKTGERGHSGPSGPAGPAGPA GARGAPGPAGPRGDKGEAGERGSNGLKGHRGLPGGPGSPGPVGPLGPPGQSGSPGPAGAR GPPGPSGPPGKDGRVGYAGPIGPPGPRGNRGESGQAGPPGHGGPPGPPGQPGAPGPCCNG GPNGDGKGFSYYGDQPSEGKIDMGEVLASLKSVNSQIENIISPDGSRKNPARNCRDLKFC HPELPSGEYWIDPNQGCKLDAIKVFCNMETGETCLSANPSSVPKKNWWTSPGPEKKHNWF GESMNGGFQFSYGDPDLPEEVADVQLAFLRILSSRASQNITYHCKNSIAYMDEASGNVKR ALKFMSSTDSEIKAEGNNKFTYTVLEDGCTKHTDEWGKTVFEYITRKTMRLPIIDIAPFD IGAPNQQFGVDIGPVCFL NT seq 4377 nt NT seq  +upstreamnt  +downstreamnt atgatgagctgtgtgcagagagccgttttgttcttctttactgtgtcacaattctccgtc attttggcacaacaacaagaggttgagttcggagaatgcagtcaccttggccaactgtat gctgaccgagatgtgtggaaaccagaaccatgtcaaatttgtgtgtgcgactcagggtct gttctttgtgatgacattcgttgtatagaggaagagttaccatgcgcaaatccagagatt ccatttggagaatgttgccctgtttgtccaacagcaacagactcacctcctgatggaaca cgagtccagggcccccaaggccccaggggagaacccggcacacctggtactcctggaaga aatggatcccctggtacccctggcctgccaggagaccctggtcaacctggcccccctgga gtctgccaaaattgcccaagttttactggaaataacttttctcctcagtatgactatgat gtcaaggctggaccaggcccaggcgttataactggtggtactggctttcctggcccaccg ggtcctagtggtcctcctggtcctgttggtcagccaggttcacctggacctcatggatac caaggtcaacctggtgaacctggacaagctggagctcctggtgctcctggccccccagga atgattggaccccctggaccttctggaaaagatggagaacctggaagacctggaagacct ggagaacgtggattacccggccttcctggccacaaagggccttctggaatgcctggaatg cctggaatgaaaggtcataggggttttgatggaagagatggttccaaaggtgatgcaggt gctcctggtctaaagggtgaaaatggccttcccggagaaaatggatccccaggaccaatg ggacccagaggtctgcctggtgaaagaggacgagctgggcctccaggaacttcaggtggt cgtggtaatgatggtagtcctggagcagctggccaacctggtccaccaggccctcctgga ccttcaggatttcctggtactccaggttttaagggtgaaacaggtcctcctggttctgca ggctctagcggacctcctggaccaaaaggagatgccggtcctcctggccaatctgggggt gctggccctcctggtcctggaggacgtgatggaaatcctggtgccaaaggtcctccaggt gctgctggaattcctggtgctcctggcctaagtggagctcgtggtcctcctggtccttct ggtgttaatggaatccctggacaaagaggtccatctggtgaacctggtaaaaatggtgca aaaggagaaccaggagcaagaggcgaacggggtgaaaatggcacccctggtggtgctggt cctcctggagaagaaggcaaggcaggagcacctggtcaacctggcactaatggtgtacct ggagctgcaggagaaaggggttccccaggattccgcggtcctgctggtgctaatggagct ccaggtgaaaaggggccacctggtgagcgaggtggtccaggcagtaccggtccaagagga gttcctggagaaccaggacgggatggcagccctggcctgccaggaatgagaggcttaaca ggaagtccaggtggtccaggagcagatggaaaaccaggcccttctggatcaccaggagaa tcagggcggagtggtcccccaggcccagcaggtccacgaggtcaaccaggtgtgatgggc ttccctggtccaaaaggcaatgagggttcaccaggtaaaaatggggaaagaggatcttct ggaccacctggtggaccggggctacctggaaaggatggtgaatcaggagcacagggaccc ccaggacctgctggaggtcctggtgaaagaggagagcaaggagcaacaggcccacccgga tttcagggtctacctggtccttcaggagctcccggagagagtgggaaaccaggagatcca ggcccaaaaggtgaaaatggagttccaggacttccaggaggaaagggtgaaaatggcatc ccaggtgaacgaggcacaccgggacctgcaggtccccctggagctagaggtggtccaggc cctgctggccctgaaggtggaaaaggccctggtggtccaactggtcctcctggtggtatg gggcctccaggattgcaaggaatgccaggagagagaggagcttctggaaatcctggaccc aagggagaaaagggagagcctggaggcagaggaggagatggtgtacctggtaaagatgga ttacgagggcctgtaggatccattgggccacctggtccatctggccaacctggtgataag ggagaacctggacctgctggaccccatggcccatcaggtccccgtggtggaccgggtgat cgtggagaacatgggccacctggtcctgctggcttccctggagctcctgggcaaaatgga gagcctggtggaaaaggagagagaggtcttcctggtgaacgaggtgaatctggaccccca ggaattgcaggtccatcaggaggtcctggtgcacaaggtccagctggttcagcaggacca aaaggagaacgtgggggtccaggtcctgcaggttcacctggctttcctggctctcgaggc ttacccggtcctcctggtaacagcggagcgtcaggaccacctggcaatgccggcccacca ggcaaagatggacattctggcccacctggttctactggcccacctggtcccccaggtggt tcaggtccaaaaggtgagccaggtgcaccaggagaaaagggcacaccaggagcaaaagga tcagacggtataccaggtcctgcaggaaataccggcatacctggacagcgtggtattgtt ggattgccaggaacaaggggaccatcaggctctcccggcccggctggtcccaagggtgaa gatggcaaaccaggaagtaatggtagtccaggggaacgaggatctccagggccaggaggt tctcctggacttagtggggcaccaggagaaccaggcagagatggtaatcctggatcagat gggctcccaggtcgtgatggatccccaggaccaaagggtgatcgtggtgaaaatggtcct gctggtgtacctggatctccaggtcatatggggcccccaggtaatgctggtgcgcctgga aaaactggtgaaagaggacattcgggtccttctggtcctgctggtccagctggtccagcc ggtgctcgtggtgctcctggccctgctggtccacgtggtgataaaggtgaagctggcgaa cggggtagcaatggactcaagggtcaccgaggacttcctggtggcccaggatcccctggt ccagtgggtccactgggtcccccagggcaaagtggaagcccaggacctgcaggtgctaga gggcctcctggaccaagtggcccacctggcaaagatgggagagttggttatgcaggcccc attggccctccaggtcctcgtgggaacagaggcgaaagtggacaagcgggtccacccggt cacggtgggcctcctgggcctcctggtcaacctggagcacctggtccatgctgcaatggt ggtcctaatggtgatggtaaaggattcagctactatggagatcagccatctgagggcaaa attgacatgggagaggttttagcttcactgaaatcagtcaacagccagatcgaaaacatc attagccctgatggttcacgaaagaatcctgcccgtaactgcagagatctgaagttctgc catcctgaacttccaagtggagagtattggatcgatcctaaccaaggttgcaaactggat gccatcaaagtattctgcaacatggaaactggggaaacatgcctcagtgccaatccctca agtgttccaaagaagaactggtggacaagcccaggtcccgaaaagaagcacaattggttt ggagagtctatgaatggaggtttccagttcagctatggagatccagatcttccagaagaa gttgcagatgttcagctggcattcctcagaatcctttcaagccgagcctctcaaaacatc acctaccattgcaaaaacagcattgcctatatggatgaagccagcgggaatgtgaagaga gcactcaagttcatgagttctactgatagtgaaatcaaggcagaaggaaacaacaaattc acatacacagttctggaagatggctgtactaaacatactgacgaatggggtaaaaccgtc tttgaatacataacacgcaagacgatgaggttgccgataatagatattgcacctttcgac attggcgctcccaatcaacaatttggtgtggacattggcccagtttgcttcttataa

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