Crotalus tigris (Tiger rattlesnake): 120317350
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Entry
120317350 CDS
T08476
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120317350 (PRDM4)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120317350 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
MLVIN_C
SET
zf-C2H2_jaz
PyrI_C
zf-C2H2_6
Mu-like_Com
Motif
Other DBs
NCBI-GeneID:
120317350
NCBI-ProteinID:
XP_039219824
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MTWIKCLPLVLLRIRTQPQKDLGLSPYELYGVSFMPGNISMDSLVTRDKVIRHYVHKLSQ
YLDHCRKQGLLIQTPPLEFPVHKFEVGQWILIRMWKEEKLQPKWEELFHVLLTSETAVRM
KEKGMNEMSLSPVGMEQLAASSVSNALAVAGNHIALTSSPTHNAIPAPGLPVAIPNLGPS
LPSALSLMLPMGIGDRGVMCGIPERNYTLPPPPYPHLESSYFRHILPGLISYLADRPPPQ
CIHPNNISVDSNSALSVSNNPSDLDPYQPNGSVGLEAGIVSMDSRSVNAHNTQSLHPSDG
HDVALDTTITIESVSRVTSPISSDRMAEELRMSDVGGDHSQIANGSRNHEPLAVDGSLTS
ETVGHNGVIPIHGNSLELPVVMETDHISGRVNGMPDRTLGDSIHTVAMSSNSVSVALSTS
HNLTSLESVSLHEVGLSLEPVTVSSINQEVGLGQNHVDVSSDNLAFVPSSLQMEDSNSNK
ENMATLFTIWCTLCDKAYPSDCPDHGPVTFVSDTPIESRARLSLPKQLNIRHAVMGPEDG
GQYCQLSTCLGSPSLGVWARETIPVRTCFGPLIGQQSHSVEVADWTDKAANHIWKMYHNN
VLEFYIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPDHELLFYYSR
DYARQIGVPEHPDVHTCHCGKECASYAEFKVHLSSHLHSHFPSQEHSSTHGSGHSKERKW
KCSMCPQAFISPSKLHVHFMGHIGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCAL
CEKSFTQKAHLETHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLTHTQERQIKCPQCEKL
FLRTNHLKKHLNSHEGKRDYVCEKCSKAYLTKYHLTRHLKICKGPTSTLSAQEEEEEGSS
EEEELINSTTNENCQLGTTMYVTADTLSCHK
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgacttggataaaatgtttacctttagtattgttgcgaataagaacacaaccacagaaa
gatttaggattgtctccttatgagttgtatggtgtgtcatttatgcctggaaacatttcc
atggactctttagtaacaagggataaagtaataagacattatgtgcataaactgtcgcag
tatcttgatcattgcaggaaacaaggcttgctgatccaaacaccccctttggaatttcct
gtccacaagtttgaggtgggacagtggatcctgatccgaatgtggaaggaggagaaattg
caacctaagtgggaagaactattccatgtgttgctgacctctgaaactgcagttcggatg
aaagaaaaagggatgaatgaaatgagtctgagccctgtggggatggaacagctggcagct
tcttctgtgagcaatgccctagctgtcgcaggaaatcacatagctttgacctcttcaccc
acccataatgctataccagcaccagggttaccagttgcaattccaaatttggggccctca
ttaccatctgctttgtctctgatgcttccaatgggcattggagatcgaggagtgatgtgt
ggtataccagagagaaattataccctacctccaccaccttaccctcatctagaaagcagc
tactttagacacattctacctggtctcatatcttacttagctgacagacctccacctcag
tgtattcaccccaacaatatcagtgttgatagtaactcagctttatctgtctccaataat
ccttcagacttagatccctaccaacccaatggatccgtgggtcttgaagcaggcattgtc
tccatggattctcgttcagtgaatgcacataacactcaaagtttgcatcccagtgatggc
cacgatgtagctctggatacaacaatcaccatagaaagtgtttcaagagttaccagtcca
atctctagcgacagaatggctgaagaacttaggatgagtgatgtaggtggagatcattca
cagattgcaaatggcagccgtaatcatgagcctttagcagtggatggcagtttaacctca
gaaactgtagggcataatggtgtcatccctatccatggtaacagtttggaacttcctgtt
gttatggagactgaccacatttcaggccgtgtcaatgggatgcctgaccgaacacttggg
gattctattcataccgtggccatgagcagcaattctgtcagtgttgcgctttctacctca
cataatctcacttccctggaatctgtctcattacacgaagtgggtctcagcttggagcct
gtaacagtatcctccattaaccaggaagtaggcctgggacaaaatcatgttgatgtctcc
tcagacaatcttgcttttgtgccatcatcattgcaaatggaagattccaattccaataag
gagaatatggctacattgtttacaatatggtgcaccctgtgtgacaaggcttacccatca
gattgcccagatcatgggccagtgacttttgtttctgacactccaatagagagcagggcc
agactttctctcccaaaacagctaaatatccgccatgctgtcatgggacctgaagatggt
gggcagtattgtcaattatcaacttgtcttggatctccttccttaggtgtctgggctcgg
gaaactattcctgtccgtacctgctttggaccactcattggtcaacagagtcactcagta
gaagtagctgactggacagataaagcagctaatcacatttggaagatgtatcacaataat
gttctggaattctacatcatcacaacagatgaaaatgaatgtaattggatgatgtttgtg
cggaaggccaggaaccgggaagaacagaatctggtagcctaccctcatgatggaaagatt
tacttctgcacttcacgtgacatccctccagaccatgagctccttttttactatagtcgt
gactatgcccggcagattggtgttcctgagcatcctgatgtgcacacttgtcactgcgga
aaagaatgtgcctcttacgcagagtttaaggtccatctgagtagtcatctccacagccac
ttccccagtcaagaacacagcagtacccatggatcaggacacagtaaggaaaggaaatgg
aaatgctctatgtgccctcaagcttttatatcaccttctaagcttcatgttcacttcatg
ggacatataggcatgaagccacacaagtgtgatttctgtagcaaggcctttagtgaccct
agcaatttgcgtactcatcttaaaatccatacaggtcaaaaaaactatcgctgtgcactc
tgtgaaaaatcttttactcagaaggcacacctagaaacacatatggttatccacactgga
gaaaaaaatctgaaatgtgattattgcgataaactatttatgcggcgtcaagatctcaag
cagcatgtgctcacccatacacaagagcgtcaaatcaaatgtccacaatgtgagaagcta
tttttaaggacaaatcacctaaagaaacatttaaactctcacgaaggaaaaagggattat
gtgtgtgaaaagtgctctaaggcttacttaacaaaataccaccttactcgccatctaaaa
atttgtaaaggaccaacctctactctctcagcccaagaagaggaggaggaaggttcttcg
gaggaggaagaattgataaattctacaacaaatgaaaattgccaactcggaaccaccatg
tatgtgacggctgatacactttcttgtcacaaataa
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