KEGG   Crotalus tigris (Tiger rattlesnake): 120317491
Entry
120317491         CDS       T08476                                 
Symbol
KDM5A
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ctig01009]
    120317491 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ctig03036]
    120317491 (KDM5A)
Enzymes [BR:ctig01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     120317491 (KDM5A)
Protein phosphatases and associated proteins [BR:ctig01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120317491 (KDM5A)
Chromosome and associated proteins [BR:ctig03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120317491 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD JmjN zf-C5HC2 PHD_5
Other DBs
NCBI-GeneID: 120317491
NCBI-ProteinID: XP_039220071
LinkDB
Position
Unknown
AA seq 1692 aa
MSGDDDGLDGPHYVAEFVPPPECPVFEPSWEEFSNPLGFIGRIRPLAEKTGICKIRPPKD
WQPPFACDVQNFRFTPRVQRLNELEAMTRVKLDFLDHLAKFWELQGSALKIPVVERKILD
LYSLSKIVASKGGFEMVTKEKKWSKVASRLGYLPGKATGSLLKSHYERILYPYELFQSGV
SLMGIQKPNLDLKEKVEVEEVAVDVQSPPKQAARMNVVLKRTRRIKSQAEAGEMSRNTEL
KKLQIFGAGPKMMGLALGTKEKEDDVPRRRKGTRSEAFGMQMRQRKGALSVNFVDLYVCL
FCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQA
VREYSLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKD
FGSGFPVKDGRHKLMPEEEEYALSGWNLNNMPVLDQSVLAHINADISGMKVPWLYVGMCF
SSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEAVMRELAPELFETQPDLLHQLV
TIMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQ
CVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKEMTLMTEEEARLRECVIQMG
VLMSEEEVFELVPDDERQCAACRTTCFLSALTCSCNPERLVCLCHPNDLCSCPMQKKCLR
YRYPLEDFPSLLYGVKVRAQSYDTWVSRVTDALSANLSHKKDVIELKVMLEDAEDRKYPE
NDLFRKLRDAVKEAETCASVAQLLLSKKQKHRLNSDSGRTRTKLTVEELKAFVQQLFSLP
CVITQARQVKNLLDDVEEFHERAQEAMMDEVPDSSKLQTLIDMGSGLYVELPELPRLKQE
LQQARWLDEVRVTLSDPQRVTLDLMKKLIDSGVGLAPHHAVEKAMAELQEVLTVSERWEE
KAKVCLQARPRQSIAALENIVNEAKNIPAYLPNILALREALQRARDWTAKVEAIQNGSNY
AYLEQLENLSTKGRLIPVRLDALPQVDSQVAAARAWRERTGRTFLKKNSSYTLLQVLSPR
TDIGVYGSSKNRRKRVKELIEKEKEKDLDMESLSELEDGVEEYRDTAAVVAVFKDREQKE
VEAMHALREANLAKMTMVDRIEEIKFCICRKTASGFMLQCELCKDWFHSTCVTLPKTSSQ
KKGSSWPSKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQ
DRARQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLTSFQ
QSGFNRATSSVSSSPRQTMDYDDEETDSDEDIREAYGYDIKDNASVKSSSSLEPNLFCDE
EIPIKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSNTPRKQPRKSPLVPRSLEPPVLEL
SSGAKSQLEDLMMIGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDESMDEKPLKIR
GRDASERKRKRKLEKAEQFFGDLKQKSKELKKLEKPKKKKLKLTMDKTKELNKLAKKLAK
EEERKKKREKVAATKVELVKECTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQR
PCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAESEDYICINCARKQKQGAGSPPPPHFLLT
YKLPMEDLKKTS
NT seq 5079 nt   +upstreamnt  +downstreamnt
atgtcgggggacgacgacggcctcgatgggccgcactacgtggcagaattcgtgcctccg
cccgagtgccccgtcttcgagcccagctgggaggagttcagcaaccccctcggcttcatc
ggccgcatccgacccttggctgagaaaacgggcatctgcaagatcaggccgcccaaggat
tggcagcctccttttgcatgtgatgtgcaaaattttcgttttactccacgggtgcagcgc
ttgaatgaactggaggcaatgactagagtgaagttggatttcttagatcacctagccaaa
ttctgggaacttcaagggtctgcattgaaaattccagtagtagaaagaaaaatattagat
ctttattcactgagtaagattgttgccagtaaaggaggatttgaaatggtcactaaagag
aagaagtggtctaaagtggcaagccgattaggttatttaccaggaaaagcaacaggttca
cttttgaagtcacactatgaacggatcttatatccttatgaacttttccagtctggtgtc
agccttatgggcatccaaaagccaaacttggatctaaaagagaaagtggaagttgaagaa
gttgctgttgatgttcagtctcctccaaagcaagctgcaagaatgaatgttgtgctgaaa
agaaccagacgcatcaagtcccaggcagaggcaggagagatgagtagaaatactgaattg
aagaagcttcagatatttggagcaggaccaaagatgatgggattggcattggggacaaag
gaaaaggaagatgatgttcctcggagacgcaaaggtaccagatctgaggcttttggtatg
cagatgaggcagcggaaaggggcactatctgtcaactttgttgacttatacgtctgcttg
ttttgtggtcggggaaacaatgaggataaattattgctctgtgatgggtgtgatgacagt
taccatactttttgcttaatacctcctttgcctgatgttcccaaaggtgactggagatgc
cccaaatgtgttgctgaggagtgtaacaaaccacgggaagcctttggctttgaacaagct
gttcgagagtacagcctccaaagctttggtgagatggcagataacttcaagtcggattat
ttcaatatgccagttcatatggttcctacagaattggtggagaaggaattttggcgactt
gtgagcagcattgaagaggacgtaattgtggaatatggagctgatatctcatccaaagat
tttggaagtggctttcctgtaaaggatgggaggcacaagctaatgccagaagaggaggaa
tatgctctttctggttggaatcttaataacatgccagtcctggaccaatccgtccttgca
cacatcaatgctgatatttctggcatgaaagtgccttggctttatgtgggaatgtgcttt
tcttctttctgttggcacattgaagatcactggagctattccatcaattacctgcattgg
ggggaaccaaagacgtggtatggagtgccttcccatgcagcagaacaactggaggccgtt
atgcgagaactggctcctgagttgtttgagacccagcctgatcttttgcaccagttagtc
actatcatgaaccccaatattcttatggaacatggtgtgcctgtgtaccggaccaatcag
tgtgctggcgaattcgttgtgactttcccccgtgcctatcattctggatttaatcaaggc
tacaattttgctgaagctgtgaacttttgcactgctgactggcttccaattggacggcag
tgtgtgaaccattatcgacgcctgagacgtcattgtgtgttctctcatgaggaactaatc
ttcaagatggctgccgatcctgagtgtttggatgttgggctggctgccatggtctgcaag
gaaatgactctcatgacagaagaggaggcgcgcttaagggagtgtgttatacagatggga
gtgctgatgtcggaggaggaggtgtttgagctggttccagatgatgagcggcagtgtgca
gcctgcaggaccacctgtttcttgtctgcccttacatgttcctgtaatcccgagcggctt
gtttgtttgtgtcatccaaatgatttgtgttcatgccctatgcagaagaagtgtctgaga
tatcgatacccactggaagacttcccttctttgctatatggagtgaaagtcagagcacaa
tcttacgatacttgggtcagcagggtcacagatgcgttgtctgccaatctcagccacaaa
aaagatgtgattgagctgaaagtaatgttagaagatgctgaagacaggaaatatccagag
aacgacctcttccgtaagctaagggatgctgtgaaagaggcagagacttgtgcttcagta
gcccagctgcttttgagcaaaaagcaaaagcacagactgaattcagacagtggaaggaca
cggactaaactgactgtagaagaactgaaagcttttgttcaacagttgttcagtcttcct
tgtgtcatcactcaggctcgtcaagtaaagaacctgctggatgatgtcgaagagtttcac
gagcgtgcccaagaggctatgatggatgaggtcccagactcatccaagttgcagacgctg
atagacatgggctctggactctatgtggaacttccagaattacctcgcctaaagcaagag
cttcaacaggcacgttggctggatgaagtgcgggtgactctttcagatcctcagagagtc
accttggatttgatgaagaaactgatagactcaggggtgggcctagcaccacaccacgca
gtggagaaagccatggctgaattgcaggaggtgcttacagtttcagagaggtgggaggaa
aaagccaaagtctgcctacaagcaagacctcgacaaagtattgccgctctggagaatatt
gtgaatgaagcaaagaatattccagcttacctgcccaacattctggcattgagagaagcc
ctgcagcgtgctcgagattggacagccaaagtggaggccattcaaaatggaagtaattat
gcgtatctagagcaacttgagaatctgtctacaaaaggccgcctcatacctgtccgtctt
gatgcacttccccaagttgactcacaggtagcagcagcccgtgcgtggagggaacgcaca
ggccgaacttttctgaagaagaattctagctacacacttctacaggttcttagccctcga
actgacattggtgtatatggaagcagtaagaacagacggaaaagagtaaaggagctgata
gagaaggagaaggaaaaagatcttgacatggaatccttgagtgaattagaagatggagta
gaagaatacagggatactgcagctgtggtggctgtcttcaaagaccgggagcagaaagag
gttgaagccatgcacgccctcagggaagccaacctggccaagatgacgatggtggatcgc
attgaagaaatcaagttctgcatctgccgcaagacggccagtggattcatgctacagtgt
gaactctgcaaagactggtttcatagcacttgcgtgacccttcccaaaacgagctcccaa
aagaagggctccagctggccttccaaagaagtcaagttcttgtgcccgctttgcatgcga
tctcgaaggcctcgtcttgagacaattttatctctactagtgtccttgcaaaaactccca
gtacggttgccagagggggaagcattgcagtgcctgacagagcgagctatgagctggcaa
gatcgggcacggcaagccctggccaccgatgaactatcttctgcattggccaaactttct
gtgttgagccagcgaatggtagaacaggcagcacgcgagaaaacggagaagataatcagc
gcggaactccagaaggcagctgccaatcctgatttacaggggcatttgactagttttcag
caatctgggtttaatcgggctacaagtagtgtatcttcatctcctcgacagactatggat
tatgatgatgaggagacagattcagatgaagacataagagaagcatatggctatgacata
aaggacaatgccagtgtaaagtcttctagcagtctggagcccaacctcttctgtgatgaa
gaaattccaatcaaatctgaagaagtagtaacacacatgtggacagctccctctttctgt
gctgaacatgcatattcatcagcttcaaaaagttgttctcaaggttccaataccccaaga
aagcaaccccgtaaaagccctttagttcctcgcagtttagaacctcctgtgcttgaactg
tcttctggagccaaatcacagctggaagatctaatgatgataggagatctcttagaagta
tctcttgatgaaacccaacacatctggcggattttgcaggccacacacccgccctctgaa
gatagatttcttcatatcatggaggatgagagcatggatgagaagccattaaaaatccga
ggaagagatgcttcagagaggaaaaggaagcgcaaactagagaaggcagagcagttcttt
ggtgacctgaagcagaagtctaaagagctgaagaagttggagaaaccaaagaaaaagaag
ctgaaactgacaatggacaagacaaaggagctgaacaaactggccaaaaagctggctaaa
gaagaagaacgaaagaagaagcgtgagaaagtggctgcaacaaaggtagagctggtgaaa
gagtgcactgaaaaaaagagggagaaaaaagttttggacatcccctccaagtatgactgg
tcaggagcagaagagtcagatgatgaaaatgctgtgtgtgctgcacaaaactgccagagg
ccctgcaaggacaaggtagactgggtgcagtgcgatggtggctgcgatgaatggtttcac
caagtttgtgttggtgtctcaccagaaatggcagaaagtgaagattatatctgtattaac
tgtgcaagaaaacagaagcaaggagcaggtagtccaccaccacctcatttcctgctgacc
tacaagctacccatggaagacctcaagaagacaagttag

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