Crotalus tigris (Tiger rattlesnake): 120317492
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Entry
120317492 CDS
T08476
Symbol
SLC6A13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120317492 (SLC6A13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctig02000
]
120317492 (SLC6A13)
Transporters [BR:
ctig02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120317492 (SLC6A13)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120317492
NCBI-ProteinID:
XP_039220072
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MDYSVPGAVINGEIHAQLTGETKKKEAGNQTLDRDHWNNKLEYVLSVAGEIIGLGNVWRF
PYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTSQGGITSWRRLCPLFEGIGYAS
QVIVVLLNFYYIIVLAWALFYLFSSFTIDLPWGSCDHEWNTENCVEFQKNASLNVTLENA
TSPVIEFWERRVLNISDGIEHLGTVRWELSLCLLLAWIICYFCIWKGVKSTGKVVYFTAT
FPYLMLIVLLIRGVSLPGASKGILFYLYPDLTRLSDPQVWMDAGTQIFFSYAICLGCLTA
LGSYNKYHNNCYRDCIALCFLNSGTSFVAGFAIFSILGFMAEEQGVLISEVAESGPGLAF
IAYPRAVVMLPFSPLWACFFFVMVVLLGLDSQFVCMESLVTAVVDMYPEIFRKKNRRETL
ILLVSILSYFVGLVMITEGGMYVFQLFDYYAASGMCLLFVAIFETLCIGWVYGADRFYNN
IEDMIGYRPWSVIKYCWLFITPAVCLATFFFSLIKYTPLTYNKKYVYPWWGDTVGWLLAL
SSMICIPLWIVYKLSTIKGSLRERFHQLACPDEDLPQRKCPGHHLFPMTELDSHC
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggattacagcgtccctggggcagtgatcaatggagaaatacatgcacaactcactgga
gaaacaaagaaaaaagaagcagggaatcagacactagatcgggatcactggaacaacaag
ctggaatatgtgctgtctgtggcaggagaaatcattggtttggggaatgtttggcggttc
ccttatctctgttacaaaaatggtggtggtgccttcttcattccctacctcatcttcctt
ttcacctgtggaattccagtgtttttcctagagacagccctgggacaatataccagtcag
ggaggcatcacttcctggaggaggctatgccctctttttgaagggattgggtatgcttct
caagtgattgtggtgctccttaatttctattatattattgtcctggcttgggccttgttt
tacctcttcagttcattcaccatagatctcccatggggcagctgtgatcatgaatggaat
acagagaactgtgtggaattccagaagaatgcctctctaaacgtgacactggaaaatgcc
acctctcctgtcattgaattttgggagcggagagtgttaaacatttctgatggcattgaa
catttgggcacagtgcgttgggaattgtcgctctgtcttcttctggcctggatcatctgt
tatttctgcatttggaaaggggttaagtctacaggcaaggtagtatacttcactgccacc
ttcccatacctcatgctgattgttctgctgatcaggggagtttccttgcctggggcatct
aaagggatcctcttctacctttatccagacctcactcgactcagtgatcctcaggtatgg
atggatgcaggcactcagatcttcttctcatatgccatttgcctggggtgcctaacagct
ttgggcagctacaataagtatcataacaactgttacagggattgtatcgctctgtgtttt
ttgaacagtggcacaagttttgtggctggctttgccattttttccattctgggtttcatg
gcagaagaacaaggagtgcttatttcagaggtagctgagtcgggacctggtctggctttc
attgcctatccacgagctgttgtcatgctgcctttctccccattatgggcttgcttcttc
tttgttatggtggttctcctgggactggacagtcagtttgtctgtatggaaagcctggtc
accgctgtagttgacatgtatcctgaaatcttccggaaaaagaaccgcagagaaacttta
attcttcttgtctccatcctctcatactttgtgggtctcgtcatgatcacagagggtggg
atgtatgtcttccagctctttgactactatgctgccagtgggatgtgcctactcttcgtt
gccatttttgagactctgtgcattggctgggtatatggtgctgaccgtttctacaataac
atcgaagacatgattggctaccgaccatggtctgttattaagtactgttggttattcata
acaccagctgtctgtctggcaacctttttcttttctttgattaaatataccccactgaca
tacaacaagaaatatgtgtacccgtggtggggagacactgtcggctggctgcttgcactc
tcttcaatgatctgcatccctctctggattgtctacaaactttccaccattaaaggatcc
ctgagagagaggttccatcagcttgcctgtccagatgaagacttgcctcaaagaaagtgt
ccaggccatcatctcttccccatgacagaattagattctcactgttag
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