Crotalus tigris (Tiger rattlesnake): 120317546 Help Entry 120317546         CDS       T08476                                  Symbol RC3H2 Name (RefSeq) roquin-2   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism ctig  Crotalus tigris (Tiger rattlesnake) Brite KEGG Orthology (KO) [BR:ctig00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:ctig03000]     120317546 (RC3H2)    04121 Ubiquitin system [BR:ctig04121]     120317546 (RC3H2) Transcription factors [BR:ctig03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     120317546 (RC3H2) Ubiquitin system [BR:ctig04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     120317546 (RC3H2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4_3 zf-C3HC4 zf_CCCH_4 zf-C3HC4_4 Prok-RING_4 zf-RING_10 zf-C3HC4_2 Motif Other DBs NCBI-GeneID:  120317546 NCBI-ProteinID:  XP_039220153 LinkDB All DBs Position Unknown AA seq 1196 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKACLSKLHRKACPFDQTAIHTD IDVLPVNFALLQLVGAQVPERQAVKLSNLGENQHYELAKKCVEDLALYLKPLSGSKGVAS LNQSTLSRPMQRKLVTLVNCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIALEAGLRISPEQW SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRLHLEFLANI DPNPDAASPTWEQLENALVAVKTVVHGLVDFIQNYSRKGPEIPQPQPNSKYKTSLCRDLR QQGGCPRGTNCTFAHSQEELEKYRLRNKKIGATVRPFLLLGKASIPSAVPIIGNADPAGK AASSTNGSPSPESGAPQLIPRCTNTPLLRTLEHVKKGGKAVANGQNPTLSPTEPLPEHKT GSPPKTPVNQTAATSAGPVPPPPPPLPPSPALAGSEISPLAPKPSPFATRLPIYPAHSET LPYFQDPRAHLSYEAPPYPQTGYYPGPAAVPTGVPPCLPRFVRSSSISESSLPPASLQYN EPYGTFPSRDRLTAAYQQAQPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNS LPPMEVTHPSVYHNLVRERYGSLDSYCSVPCQVPVEQRTVPWAREPCGHLKPAYEDPLRK KPEQWAPCHIPKVPLVTTSSLPAAAPSPSSPSPFFSVDFSCEFSKNASGSSDPRYEDGQP CQYSPWSCSTLSSCISAVEAEPKDVLAKSSTVLLDLDSGDPKRPAHLFETQRKAKEEDPI IPFSDGPIISKWGAISRSSRTGYHTTDPVQATASQGSTTKPISMSDYIPSISSVDLRWSC YAPESISSAPFLERDQFVSPGEPAPPKPSSTGDLLSTELQQAKSNSVLLQREANALATQQ KWDALSEGSALTLKLLSKETELRNGQADSPEDSTGTKANRDIELELSSLDTDEAEGPVEQ MKEMLGLQLGISGQSANLFNGSALENGHLAEQSQVDARQAKRPVLHEELAHLEKQTGVLP AASCFSPPTETAGSRISLPLMTSASMGSLLLKTAHGLVDGPNDFLRPIANGKMVNT NT seq 3591 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaggccgcccagtggacggagttcctgtcctgtcccatctgctacaatgag tttgacgagaacgtgcacaagcccatcagcctgggctgctcccacaccgtctgcaaggcc tgcctgagtaagctgcatcgcaaggcctgccctttcgaccagaccgccatccacaccgac atcgacgtgcttcccgtcaactttgcgctgctccagttagtgggagcccaggtgcctgaa cgccaggctgtcaagctaagcaacctgggagaaaaccaacactacgaactggcaaagaaa tgtgtggaagacctcgccctttatttgaagcccctgagcggaagtaagggtgtggctagc ttaaatcaaagcacgctgagccggccgatgcaacggaagctggtgaccctggtgaactgc cagctggtggaagaagaaggccgcatcagggcgatgcgggcagctcgctccctcggggag aggaccgtcaccgagctgatcttgcaacaccagaaccctcagcagctctcggccaatctc tgggctgctgtccgggccagggggtgccagttcctcgggccggctatgcaggaggaagcc ttgaaactggtcctgctggccttggaagacggctcggccctgtcccgcaaagtcctggtg ctgtttgtggtccagcgcctggagcccaggttccctcaggcatcgaaaaccagcatcggc cacgtggtgcagctgctctaccgggcgtcctgcttcaaggtcaccaagcgggacgaggac tcttccctgatgcagctgaaggaggagttccgcagctacgaggccttgcggagggagcac gacgctcagatcgtccacatcgccctggaagccggtctccggatctctcccgagcagtgg tcctccctcctgtacggggacctggcccacaaatcccacatgcagtccatcatcgacaag ctccagtctccggaatcctttgccaaaagcgtgcaggaattaaccattgttctgcagcga acgggggaccccgccaacctgaatcggcttcgtctccatttggaattcttggcgaacata gatcctaacccagatgcggcgtctccaacttgggagcagctggaaaatgccctggtggcc gttaagacagttgtccatggccttgttgacttcatccagaactacagtaggaaaggccct gaaattccacagcctcagccaaatagcaagtacaaaaccagcctgtgccgtgaccttaga caacagggcgggtgtccgcgcgggaccaactgcacctttgcccactcgcaggaggagctc gagaagtatcggctgagaaacaagaaaatcggtgccacggtgagacccttcctgctgctt gggaaagccagcatcccaagcgccgttcccatcatcggaaacgcagacccggcgggaaag gcggcgtccagcaccaacgggagtcccagcccggagagcggtgccccccagctgatcccc cgttgtaccaacacccctttgttacggactctggagcacgtgaagaaaggggggaaggcc gtggcaaacggccagaaccccactttgtctcccaccgagcctctgcccgaacacaaaacc ggatcccctccgaaaacgcctgtgaaccagaccgcagctacctcagcaggccccgtccct cctcctccccctcctcttcctccctctccagcccttgcaggcagcgagataagccccctc gcccccaaacccagcccttttgccacccgcctgcccatctacccggctcactcagagacc ctgccctatttccaggatcctcgggctcatctctcctatgaagctccgccttatccgcaa acaggatattatccaggccctgcggcggtccctacaggggtgcccccctgcctccctcgc tttgtgagatccagcagcatctccgaatcctctctcccgccggcctctctacagtacaat gaaccttacggcacgtttccttctcgggacagacttaccgccgcttaccaacaggcacaa ccgcagccctacgggccggtgccaccggttccttccgggatgtacgccccggtttatgac agccggcgtatttggcgaccaccgatgtaccagagggacgatatcatccggagcaactcc ttacctcccatggaagtcacccacccctccgtctatcacaatttggtgcgggaaagatat ggctctttggacagctactgttcggtgccctgccaggtgccagtggagcagaggactgtg ccttgggcaagggaaccttgtggacatctgaagcctgcctacgaggaccctctccgaaag aaaccggaacagtgggcgccttgccacatcccgaaagtgcccctggtgacgacgtcctct ctccctgcagctgcaccgtctccatcctccccttcccctttcttcagcgtggacttcagt tgtgaattcagcaagaacgccagcggctcgagcgaccccaggtacgaagacggccagccg tgccagtactcgccctggtcctgcagcaccctcagctcctgcatcagcgcggtggaggcc gagccgaaggacgtcctggctaaatccagcacggtcctcctagatctggacagcggagac cccaagaggccggcccacctctttgaaacccagaggaaggcgaaggaggaggaccccatc atccctttcagcgacgggccgatcatttccaagtggggcgccatctccaggtcatcacgg acaggctaccacaccacggaccctgtccaggcgactgcttcccaaggaagcactaccaag cccatcagcatgtcagattacatccccagcatcagctccgtggacttgaggtggagctgc tacgcgcccgagtccatttcctcggcccctttcctagaacgggaccagttcgtgtctccc ggagaaccggctcccccaaagccctccagcaccggagatctcctgagcaccgaattgcag caggccaagagtaactcggtgctgctccagagagaggccaacgccctggccacgcagcag aagtgggacgccctgagcgaaggcagcgccctcaccttgaagctcttgagcaaggaaacg gagctgaggaacggccaggccgactcccccgaggacagcacgggcaccaaggccaaccga gacattgaactggaactttcatcgctggacactgatgaggccgaggggccggtagagcaa atgaaagagatgctgggcctgcagctcggcatcagcggtcagagcgctaacctcttcaac gggtcagctctggagaacggtcaccttgcggagcagtcccaggtggacgccaggcaggcg aagcggcctgtcctgcacgaagagcttgctcatttggagaagcagacgggggtcttgcca gcggcgtcctgtttcagcccacccacggagacggcaggcagcaggatctctctgcccctc atgacgtccgccagcatgggcagccttcttctgaaaacagcccatggcctcgtggacggg ccaaatgactttttaaggccgattgcaaacggcaaaatggtgaacacgtga

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