Crotalus tigris (Tiger rattlesnake): 120317571 Help Entry 120317571         CDS       T08476                                  Symbol COL5A1 Name (RefSeq) collagen alpha-1(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism ctig  Crotalus tigris (Tiger rattlesnake) Pathway ctig04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ctig00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     120317571 (COL5A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ctig00536]     120317571 (COL5A1) Glycosaminoglycan binding proteins [BR:ctig00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120317571 (COL5A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  120317571 NCBI-ProteinID:  XP_039220181 LinkDB All DBs Position Unknown AA seq 1652 aa AA seqDB search RGPPSVPGKRAAHQVGLPSLWSASSLQGDIQQLLIVSDHQAAYDYCEHYSPDCDTAVPDV PHSQDPNPDEYYPDGAGNLEVEGETYYYEYPYYEDLDDTGKATPTTVQPVETDGAAREVT ETTESPTPPPTPPPVVEKTQEEIPKEEDELLLEEYNYGPITDEYYTPIPYEDLNYEDLDN FDKLPEEGIEAEVPTSTVITYNETDTTGRVSEGGEDPDKDFSVTEYGEGYYDGYFDRTDS PDIGPGMPANQDTIYEGISGPRGEKGQKGEPATIEPGMLLEGPAGPEGPAGLPGPPGTTG PAGPMGDPGERGPPGRAGLPGADGLPGPPGTLLMLPFRFSGGGDGGSKGPQISAQESQAQ AILQQARLALRGPAGPMGLTGRPGPMGPPGGGGIKGESGDMGPQGPRGVQGPPGPSGKPG RRGRAGSDGARGMPGQTGPKGDRGFDGLAGIPGEKGNRGDPGPSGPPGAPGEDGDRGDDG EVGPRGLPGEPGPRGLLGPKGPPGPPGPPGITGMDGQTGPKGNVGPQGEPGPPGQQGSPG AQGLPGPQGPIGAPGEKGPLGKSGLPGMPGADGPPGHPGKEGPPGEKGSQGPAGPQGPLG YPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGVKGDRGEIGPPGPRGEDGPEGPKG RGGPNGESGPLGPSGEKGKLGIPGLPGYPGRLGPKGSIGFPGFPGANGEKGGRGTAGKPG PRGQRGPTGPRGERGQRGITGKPGPKGNSGGDGPPGPPGERGPPGPQGPTGFPGPKGPPG PPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQG LPGLAGKEGTKGDPGPAGLPGKDGPAGFRGFPGDRGLPGPVGPVGLKGNEGPPGPPGPAG SPGERGPAGAAGPIGLPGRPGPQGPSGPAGEKGTPGEKGPQGPAGRDGIQGPVGLPGPAG PVGSPGEDGDKGEIGESGQKGSRGDKGEQGPPGPIGPQGPIGQPGLAGADGEPGPRGQQG LFGQKGDEGPRGFPGLPGPVGLQGLPGPPGDKGETGDVGQMGPPGPPGPRGPGGPPGADG PQGSVGGIGNPGAVGEKGEPGEAGGPGLPGDTGPTGPKGERGEKGEAGPSGAAGPPGPKG PPGDDGPKGSPGPVGFPGDPGPPGESGPAGQDGPPGDKGDDGEPGQMGSPGPTGEPGPSG PPGKRGPPGPAGPEGRQGEKGTKGEAGLEGPPGKTGPVGPQGPPGKPGPDGLRGIPGPVG EQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPG PQGGSGPKGEQGIQGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTGPKGETGHPGLPGPPG PPGEVIQPLPIQSSKRTRRNIDASQLMDDVNSDNYVDYNDGMEEIFGSLNSLKLEIEQMK HPLGTQHNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGETCIFPDKK SEGSKMARWPKEQPATWYSRYKRGSLLSYVDADGNPIGVVQMTFLRLLSASAHQNVTYNC FQSVAWHDATAGNYEKALRFLGSNDEEMSYDNSPFIRAALDGCAAKKGYQKTVLEISTPT VEQVPIVDIMFNDFGEASQKFGFEVGPACFMG NT seq 4961 nt NT seq  +upstreamnt  +downstreamnt ggagggggcctccgagtgttccagggaagagggctgcccatcaggtggggcttccgtcat tgtggtctgcctcttccctgcagggcgacatccagcagctgctcatcgtctcagatcatc aagccgcctatgactactgtgaacactacagcccagactgcgacacagcggtgccggatg tgcctcattcgcaggacccaaaccctgatgaatactacccagacggggccgggaacttgg aagttgaaggagaaacttactattatgaatacccctactatgaggacctcgatgacacag ggaaagccaccccgaccactgtccaacctgtggaaactgatggagcagccagggaagtga ctgaaaccactgagagccccacccctccgcccacccccccaccggtggtggagaagaccc aggaggagattcccaaggaagaggatgaactgctgttggaggaatacaactacgggccca ttacggacgagtactacacgccaatcccttacgaagacctcaactatgaagacctggaca atttcgataagctcccagaagagggcattgaggcagaagttcccaccagcacggtcatca cctacaatgaaacggataccacaggaagagtaagtgaaggtggagaggatcctgataaag atttctctgtcactgagtacggggaaggatactatgacggttacttcgacaggactgact cccctgacattggacccgggatgcctgctaaccaggataccatttatgaagggatcagtg ggcctcgaggcgaaaaggggcagaagggagagccagcgaccatagagccaggcatgcttc tcgaaggaccagctggcccagaaggcccagccgggcttccaggtcccccgggaacaacgg ggccagcgggcccaatgggagatcctggagaaaggggtccacccggacgtgcaggacttc ctggtgctgatggtttgccaggcccacccgggacgttgctgatgctgccgttccggttca gcgggggtggagacgggggctcgaaagggccccaaatctctgcccaggagtcccaagcac aagccatcctgcagcaggccaggctggctctgaggggacccgctggcccaatgggactga ccggaagaccaggccccatggggcccccaggtggtggaggaatcaaaggtgaatcgggag acatgggacctcagggtccacgaggggtgcagggccctccgggtccatcaggaaaaccag gacgacggggacgggctggcagcgatggtgctcgagggatgccaggccaaacggggccga agggggaccgcggttttgatggcctggctgggatccctggagaaaagggcaacaggggtg atcctggcccctcgggccccccaggcgccccaggtgaagatggtgacaggggtgacgatg gagaagttggacccagaggtctccccggtgaacctggcccccgtggtttgcttggaccga agggacctccggggccaccaggacctccgggcattactgggatggatggacagactggcc ctaaggggaatgtgggccctcaaggtgagcctggacccccaggtcaacagggaagtccag gcgctcagggtcttcctggtcctcaaggtccaattggagcccccggagaaaagggtcctc tgggaaaatccggtcttcctggcatgcctggagcagatggtcccccgggccatcctggca aagaagggcctcccggtgagaaggggagccagggtccagctggccctcagggcccacttg ggtatcccggcccccgtggagtgaagggggccgacggcatccgtggcttgaaaggaacga agggcgagaagggtgaagatggcttcccaggattcaaaggcgacatgggcgttaaaggcg accggggtgaaattggcccccctggtcctcgtggggaggatgggccagaaggcccgaaag gtcgcggtggccccaatggagagtcaggccctctaggtccatctggagaaaagggaaaac ttggcattcctggtttgcctggataccctggaagacttggccccaagggctccattggat ttccagggttccccggagccaacggagagaaaggaggaaggggcaccgctggcaaacctg gacccagaggacagcgaggacccacgggtcctcgaggagaacgcggccagcgaggcatca cagggaagcctggtccaaagggcaattctggtggggacggacctccgggaccgccaggtg aaaggggacctccaggccctcaaggaccaaccggatttcctggaccaaaagggcccccgg gtcctccgggaaaagatggattgccaggccaccctgggcagagaggcgaaacgggcttcc aagggaagacgggtccacctggacctccaggtgttgttggtccacagggccccacaggag aaacaggcccgatgggtgaacgtggccatccgggccctcccgggccccccggtgaacagg gacttcctggcttggctggaaaagaaggaacgaagggtgacccaggcccggccggcttgc ccgggaaagatggcccagccggtttccgaggcttccccggcgaccgaggactccccggcc cggtgggacctgtggggctgaagggcaacgaagggccaccggggcctcctggaccagcag gctctccaggggagcgaggtcctgcaggagcagctggcccaattggtctgccaggacgtc ctggaccccaagggccctctggccctgcgggtgagaaagggaccccgggtgaaaaaggcc ctcaaggcccagctggacgagatggcattcaaggaccagttggacttccgggccctgccg gcccggttggctccccaggggaagatggagacaagggtgaaattggtgaatcagggcaga aaggaagcagaggtgacaaaggagaacagggtccaccgggtcctattggtccacagggcc caattggccaaccaggtttagcgggagctgacggggagcctggcccacgaggacagcagg gcctttttggacagaagggggatgaagggcctagaggatttcctggccttccaggaccgg ttgggttgcagggcttacctggacctccaggtgacaagggagaaactggagatgttggtc aaatgggtcccccaggccctcccggacccagaggcccaggtgggccccctggagctgatg gaccacaaggctcagtcggagggattggaaatccaggggccgttggtgaaaagggagaac ctggagaagcaggggggcctggcctacccggagacactggaccaacgggtcctaaaggag agaggggggaaaaaggggaagcaggcccctctggggctgctggccccccaggccccaaag gtcccccaggagatgatggccccaaagggagcccgggtccagttggctttccaggtgatc caggtcctccgggggagtctggtccagctggtcaggatggcccaccaggtgataagggag atgatggtgaacctggccaaatgggctccccgggtccaaccggagagccagggccttctg gaccaccaggcaagagagggccacctgggccagcgggacccgaaggccgccagggagaga aaggcaccaagggtgaagctggattggaaggacctcctgggaaaacgggtcctgttggtc ctcagggacctccaggaaagccaggtccagatggacttcggggaatacctggcccagtgg gtgagcaaggccttccgggttccccaggcccagatggacctcctggcccgatgggcccac ctggattacctggcctgaaaggggattcgggtccaaagggagaaaagggtcatcccgggt tgattggtcttattgggcctcccggcgagcaaggagaaaagggagaccgaggattgccag gacctcaaggaggatcagggcctaaaggagaacagggtattcaaggtccgtccggccccc ttggcccccctggccctccagggctgccggggccccccggtccaaaaggtgctaaaggat cttccgggccaaccggtccaaaaggagaaactggccatcccggcctaccaggacctcccg gtcctccaggagaggtcatccaaccccttcccatccagtcctccaaacggacgcgcagaa acattgatgccagccagctgatggatgatgtcaattctgacaattacgtggactacaatg acggcatggaggagatcttcgggtccttgaactctctgaaactggaaatcgagcagatga aacaccccttgggcacccagcacaacccagctcggacctgcaaggacctgcagctttgcc acccggacttcccggacggagaatattgggtagacccaaatcaaggctgttcccgggatt ccttcaaagtttactgtaattttactgctggtggggaaacttgcatcttcccagataaga agtctgaggggagcaaaatggcccgttggcccaaagagcagccagctacgtggtatagtc gctacaagcgagggtctttgctctcctacgtggacgctgacggcaaccccatcggagtgg ttcagatgactttcctgcggctcctgagtgcatccgctcaccaaaacgtcacctacaact gcttccagtctgtggcgtggcatgacgccactgcgggcaactacgagaaggccctgcgct tcctgggctccaatgacgaagagatgtcgtatgacaacagccctttcatcagggcggccc ttgacggctgtgcggcaaagaagggttaccagaagacggtcttggaaattagcaccccca cagtggagcaggtccccattgtcgacatcatgttcaatgactttggcgaagcatctcaga agtttgggttcgaggtgggaccggcgtgcttcatgggctga

DBGET integrated database retrieval system