Crotalus tigris (Tiger rattlesnake): 120317590
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Entry
120317590 CDS
T08476
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04136
Autophagy - other
ctig04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120317590 (ATG4D)
04136 Autophagy - other
120317590 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctig01002
]
120317590 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120317590 (ATG4D)
03029 Mitochondrial biogenesis [BR:
ctig03029
]
120317590 (ATG4D)
Peptidases and inhibitors [BR:
ctig01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
120317590 (ATG4D)
Membrane trafficking [BR:
ctig04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120317590 (ATG4D)
Mitochondrial biogenesis [BR:
ctig03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120317590 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
120317590
NCBI-ProteinID:
XP_039220221
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MNSVSPTSVQYLSQEELHRSDGRQFFNPRASSQGGSYPGFFSRSATCSQYSEPDEVDKIK
SKLLSTWNNMKYGWTLRIKTNFSKLSPIHLFGRVYHFGEQEDVEHFQKDFASHIWLTYRR
DFQQLEGTAWTTDCGWGCMLRSGQMLLAQGLLVHLLSKDWIWSDVLITTNLTDMQPVKAA
SLPCPSVSHLHQASSIPINRTIGPWELWAHRHTCRSDELEKEYYHRKIISWFADQPQAPF
GIHKLVDLGHNSGKKAGDWYGPSVTAHILRKAVDCSIEAGNLVIYVSQDCTVYKGDVAHL
AKKNNSRTPWDPEAEWKAVIILVPMRLGGETFNPAYVECIKELLKLDFCIGIIGGKPKHS
LYFVGYQDDFLLYLDPHYCQPFVDTTKENFPVETFHCNYPRKTSFTKLDPSCTIGFYVRH
RMEFEHLCLDLTRILNYAATKEKYPMFSVVEGCAQEYGLEELCAHFAQQTVQVQRHSKRD
RIKKPSAEEFVIL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgtgtcacccacctcagtgcagtacttaagccaggaagagttgcaccgttca
gatggaaggcagttttttaatccccgagccagcagccagggagggagctatccagggttt
ttctccagaagtgccacctgcagccagtatagcgaacctgatgaagtggacaagatcaag
agcaagctcctctctacctggaacaatatgaaatatggttggactctcagaatcaaaacc
aatttcagcaagctttccccaatccatctgtttggacgtgtctatcactttggagaacag
gaggacgtggagcacttccagaaagactttgcctctcatatctggctgacttaccgtcga
gattttcagcagctcgaaggcactgcatggaccactgattgtggctggggctgtatgttg
cgcagtgggcagatgctgcttgctcaaggtctccttgtccatcttcttagcaaagactgg
atctggtcagatgtccttatcactaccaatttgacagatatgcagcccgtgaaagctgcc
tctctgccctgtcccagtgtctctcatctgcaccaagcttcatccatccccattaatagg
accataggcccctgggagttgtgggctcatcggcatacctgcagatctgatgaactggag
aaggagtattatcaccgtaagattatttcatggtttgcagatcagccacaagcacccttt
gggattcacaaactagttgatcttgggcataattcagggaaaaaagctggagattggtat
ggcccatctgttactgcccacatcctcaggaaagcagtggattgctctatagaagcaggc
aatctggtaatatatgtatctcaggattgcacagtatacaaaggggatgtggcacaccta
gccaagaagaataacagcaggactccatgggatcctgaggcagaatggaaagcagtcatt
atcctagtgcccatgcgattgggtggagagacttttaatcctgcctatgtggagtgcatc
aaggagctgttgaaattagatttctgcattggaattattggagggaaaccaaaacactca
ctctactttgttggatatcaagatgacttcctgttatacttggatccccattactgccag
ccttttgtggatactactaaggagaattttcctgtagagactttccactgtaattaccct
cgaaaaacatcattcacaaagttggatcccagctgtactattgggttctatgtacgtcac
agaatggaatttgaacatctctgcttggacttaactcggatcctaaactatgcagctacc
aaagaaaaatatcccatgttctcggttgtggagggctgcgctcaagaatatggtttggaa
gagctgtgtgcccattttgcccagcaaactgtgcaagtccaacggcatagtaaacgggac
aggataaagaagccctcagctgaggaatttgtcatcttatga
DBGET
integrated database retrieval system
