Crotalus tigris (Tiger rattlesnake): 120317681
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Entry
120317681 CDS
T08476
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120317681
Membrane trafficking [BR:
ctig04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
120317681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
120317681
NCBI-ProteinID:
XP_039220385
LinkDB
All DBs
Position
Unknown
AA seq
1419 aa
AA seq
DB search
MYFLSGWPKRLLCPIEAQEPPLGIQADPQRTLFAVLSPSQLSIWYNRPSVLIVSYKETLK
AVSQFGHYDQAEWKPDSTMIAVSTANGYILFFNLLSARDKYLYEPVYPKGSPHLKGTPYY
KEEQCAPSLNLEKKQVLDLQAAITSLQSMLEDLIIATADGLLHLIHWNGLTNGRKAINLC
TVPFSVDLHSSRGSFLGFESVHIRNMEYCATLDGFAVVFNDGRVGFITPMSSGFPAEQLH
GVWAQEVFDGTCVAINNKYRLMAFGCANGSVQVYTIDHSTGAMQLSHKLELTPKQYPDIW
NKTGAVKLIRWSPDNCVVMVTWECGGLSLWSVFGAHLICTLGGDFIHRTDGTKKDPLKIS
SMSWGSEGYHLWVIDANNFGNSVTESKNKGQHFGILQFQFIKSALAVNPCISSQEQVLLQ
GEDRLYLNCGDVVQAQNPRSSSAHAEHKTVRERGQFSYENLDSQGLSTLLGHRHWHVVQI
HNIYLXINWPIRFSAIDKMGQNVAVVGKYGFAHYSLLSKKWKLFGNITQEQNMTVTGGLA
WWNDFIVIACYNLSDRQEELRVYLRTANLDNAFAHITKVQAETLLLSVFRDIIILFRADC
SICLYSIKRKSDGPNPTTSIQVLQEVSMSRYIPHPFLVVSVTLTSVRTETGISLKMPQQA
CEAESIMLNLAGQLIMVQRDRSGPQIREKESSPNQRKLLPFCAPVVLAQSVENVWTTCRS
NKQKRHILEALWLSCGGSGMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLAVLFEDA
LVLGAVNDTVLYDCLYTHSSAVEHLEVLFPFCIVERTSQIYLHHILRQLLVRNLGEQALL
LAHSCAALPYFPHVLELMLHEVLEEEATSRDPIPDPLLPTVAKFITEFPLFLQTVVHCAR
KTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTA
LEKGKWDLCRHMIRFLKAIGSGESETPPATPTTQEPTSSGGFEFFRHRSISLSQSGETLP
AGKFNLQKTLSMPSGPSGKRLSKESDCAENMYIDMMLWRHARRLLEEIRLKDLGCFAAQL
GFELIGWLCKERNRAAHVDDFVTALKKLHNDFLWPFPIIPVCSINSPLKNGKCRTVIGEQ
LLKSQSADSFLNMEIDSGLPDVPRSHSWFGAISSSQREMDTASSHGPQMQEAFLSPLLSK
VGDEGSIGSATDLTETSSIVDGDWTMVDENYSTLSLTQSELEHISLELASKGPHKSQVQL
RYLLHIFMEAGCLDWCMVIGLILRESSVVNQVFSLAQSSEVDGEMLQNIKTGLQAVESWA
SVDCPGYKPFLTIIKPQLQKLSEISEEQVPLEVFQPTNLSRVAEQASPRVEENRISANHS
ASPQNEAGPNTSIRHDEDMLGLEKEDHPLQEGSYDCTVS
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcctcagcggctggcccaagaggctgctctgccctatagaggctcaggagccc
ccgctcggtattcaagccgacccgcaaaggactttgttcgccgtgttgtccccgtcccag
ctcagcatctggtacaacaggcccagtgtgctaattgtaagctacaaagaaacactaaaa
gctgtgtcgcagtttggacattatgaccaagctgaatggaagcctgacagtaccatgata
gctgtttcgactgcaaatggatacatattatttttcaatcttctttctgcaagagacaaa
tacttgtatgagccagtgtatcccaaaggaagcccccatctgaaaggaacaccgtattat
aaggaagaacaatgtgctccatcattaaatctagagaagaaacaagtgctagatttacaa
gcagctattaccagtttacagtccatgctagaggatctgatcattgctacagctgatggt
cttctccatcttattcactggaatggcttgacgaatggaaggaaagccataaatctctgt
acagtaccattttcagtggatctacattcatctagaggttcttttttgggttttgaaagt
gtgcacataagaaatatggaatactgtgctactcttgatggatttgccgtagtgtttaat
gatggtagagttggttttattacaccaatgtcaagtggattcccagcagagcaactccat
ggtgtttgggcacaggaagttttcgatgggacttgtgtggctataaataacaagtacaga
ttaatggcatttggctgtgcaaatgggtctgtgcaagtgtatacaatagatcattccaca
ggggccatgcaattgtctcacaaactggaactaacacccaagcaatatcccgatatttgg
aacaaaacaggagctgttaaactcatcagatggtctcctgataattgtgttgttatggtg
acctgggaatgtggaggcctgtctttatggagtgtatttggagcccatcttatttgtact
ctaggaggtgactttattcatcgaactgatggtactaaaaaggaccctttaaagatcagc
tctatgagctggggatcagaaggctatcatttatgggtaatcgatgcaaataattttggg
aattcagtgactgagagcaaaaacaaaggacagcattttggtattttgcaatttcagttc
atcaaaagtgcactcgcagttaatccttgcataagcagccaggagcaggtcctccttcag
ggagaagatcgcttatacttgaactgtggtgatgtagtgcaagctcagaatcctagaagt
tcctcagcacatgctgaacataagactgtcagagaaagaggccaattttcatatgagaac
ttagattctcagggtttaagcactttattagggcacagacattggcatgttgtacagatt
cacaatatatatttataaatcaactggcctataaggttttcagccattgataagatgggg
cagaatgtagctgtagttggcaaatacggctttgcacattactctctgctttccaaaaaa
tggaaattgtttggcaacattacccaggaacaaaatatgactgttactggaggcttagca
tggtggaatgacttcattgtcattgcatgttacaacttaagtgaccgccaggaagagcta
agagtatatttacgaacagccaatctggacaatgcatttgctcatatcaccaaagtgcag
gcagaaacattattgctcagcgtctttcgggacatcataattttgttcagagcagactgt
tccatttgcctttatagtattaaaagaaaatctgatggccctaatcccactacaagtatt
caggttctgcaagaggtgtctatgtcacgttatattcctcaccctttccttgttgtgtct
gttactttaacatcagtaagaacagagacaggtatcagcttgaaaatgccacagcaggcc
tgtgaagcagagagcattatgttaaatttagcaggacagttaatcatggtacagagggat
cgatcaggtcctcagatacgagaaaaggagagtagtcccaaccaaaggaaacttctgcca
ttttgtgctcctgttgtacttgcccagtctgtagaaaatgtttggacgacctgccgttct
aacaaacagaaacggcacatattggaggctctatggctcagctgtgggggatcaggtatg
aaggtctggcttcctttgtttcccagggaccatcgcaaaccacattcctttctttcaaga
cggatcatgctgcctttccacattaatatctaccccttggctgttttgtttgaagatgcc
ttggttcttggtgctgtcaatgacactgtgctttacgactgtttatacactcacagcagt
gctgttgaacatttagaggtcctcttccccttctgtattgttgagagaacatctcagatc
tacctccatcacattttacgccagcttttggtgaggaacctaggtgaacaagccttgctt
ttggctcactcttgtgccgcattaccgtattttcctcatgtactagaactgatgctccac
gaagtgctggaagaagaagctacctcgcgggatcccattcccgatcctctccttcccact
gtggctaaatttattacagagttccccctcttcctacagactgttgttcattgtgctaga
aaaacagaatatgccctgtggaattatctctttgctgctgttggaaatccaaaagacttg
tttgaagagtgtttaatggcccaggatttagacacagctgcatcttaccttattattctg
cagaatatggaagttccagcagttagtaggcagcatgcaactctgctattcaatacagct
ttggagaaaggaaagtgggatctttgtcggcacatgatcagatttctgaaagccattggc
tctggagaatccgaaactcctcctgctacaccaacaactcaggaacctacttcaagtggt
ggctttgaattcttcagacatcgcagtattagcttgtctcaatctggagagacacttcca
gctggcaaatttaacttgcaaaaaaccttgagcatgccatctggcccgtctgggaaaaga
ttgagtaaggaaagtgattgtgctgagaacatgtatattgacatgatgttgtggagacat
gctcgacgtcttctggaagaaatcaggcttaaggatcttggttgttttgctgcgcagctg
ggctttgagttgataggctggttgtgcaaagagcgtaaccgagctgcccatgtggacgat
tttgtgactgccttgaagaaattacacaatgattttctttggccatttcccattatccca
gtgtgctccataaattcacctctgaagaatggaaaatgtaggacagtaataggtgaacaa
ctcttaaaatcacagtctgctgacagctttttaaacatggaaatagacagtggcctccca
gatgtaccaaggagtcatagctggtttggtgccatcagctcctcccaaagagagatggac
acagcatcctcccacggccctcaaatgcaggaggcatttctctcacctttgttaagtaaa
gtgggtgacgaggggagcattggctctgccacggacctgacagaaacaagctctattgtg
gatggagactggactatggtggatgaaaattattccaccttgagtctgacgcaatctgaa
ttggaacatatctctttggagctggccagcaaagggccacacaaatcacaagttcagctg
cggtatttgcttcatattttcatggaagcaggatgcctggactggtgcatggtcataggc
ctcatccttcgagaatcctcagtcgtcaatcaagtgtttagtctagcgcagtcttcagag
gtcgatggggagatgttgcagaacattaagacaggactgcaggcagtagaaagctgggct
tctgtagactgtcctggctataagccatttttaaccattatcaagccacaactgcagaaa
ctgagtgagatatcagaggaacaggtgccactggaagtctttcagcctacaaatctatca
agggtggctgaacaagccagtccaagggtggaagagaaccggatttcagctaaccacagc
gctagccctcaaaatgaggctggtcctaatacttcaattcgacatgatgaggacatgctt
ggactggagaaggaagaccatccccttcaggaaggcagttatgattgtactgtctcctga
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