Crotalus tigris (Tiger rattlesnake): 120317694
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Entry
120317694 CDS
T08476
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120317694 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120317694 (SMARCA2)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120317694 (SMARCA2)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120317694 (SMARCA2)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120317694 (SMARCA2)
Chromatin remodeling factors
BAF complex
120317694 (SMARCA2)
PBAF complex
120317694 (SMARCA2)
GBAF(ncBAF) complex
120317694 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
120317694
NCBI-ProteinID:
XP_039220424
LinkDB
All DBs
Position
Unknown
AA seq
1560 aa
AA seq
DB search
MSTPTDPTTMPHPGPSPGPGPSPGPILGPSPGPGPSPSSVHSMMGPSPGPPSVPHPMPSM
GPGDYSQEGMHQMHKPIDGLHEKGMVEDLHNSSMKAANMRPPLPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMQPSQPGPMMPAEQQVMSQPSRGPSPFSPVQLH
QLRAQILAYKMLARGQPIPDNIQLAVQGKRSLPGIQQQQTLYRACAALPIVGQGVASGMP
GLTAAMAPKTWPEGQGVDMNASSTPQKLAVPPPSGRPSPAPAATQPPAVMPGPSVPQPAA
SQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDL
RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKL
EKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQK
KETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQA
AKEKKKRRRRKKKVEDNTEGIGSGLGPDGELIDESSQMSDLPVKVTHTETGKVLLGPEAP
KASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEDEDEDESSRQETDEKRHLDPNIEDVSE
RDAKQIIETARQDVDDEYSMQYSARGSQSYYTVAHAISEKVEKQSSLLINGTLKHYQVQG
LEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMDHKRLNGPYLIIVPLSTLSNWTYE
FDKWGPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVD
EGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQ
WFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMA
ALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAE
HLGYSSGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNF
AYLRLDGTTKSEDRATLLKKFNEPNSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH
QDLQAQDRAHRIGQQNEVRVLRLCTVNTVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSH
ERRAFLQAILEHEEENEEEDEVPDDETLNQMIARNEEEFELFMRMDMDRRREDARNPKRK
PRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIED
GNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLTKQMNAII
DTVINYKDSSGRQLSEVFIQLPSRKEYPEYYELIRKPVDFKKIKERIRNHKYRSISDLEK
DVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKLVKEDESEEDSNEEEEDEEDESES
ESKSVKVKIKLNKKEDKNRDKGKGKKRQVRLKAQPVVSDDDTDEDQDENDQSEASGSDDE
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaccaactgatcctactacaatgcctcatccaggcccttcaccagggccagga
ccatctccgggaccgatcctaggtcccagcccaggacccgggccatcaccaagctcagta
catagcatgatgggaccaagtcctggacctccaagtgttccacatccaatgccatctatg
ggaccgggtgattattcacaggaaggcatgcatcaaatgcacaaacctattgatggtttg
cacgaaaaagggatggttgaagacctacataacagttccatgaaggctgcaaacatgcga
cctcctcttcctggcatgggaccacctcagagtccaatggatcaacacagtcaaggttat
atgtctccgcatccgtctcccctgggagcacctgagcacgtgtctagtccaatgtctgga
ggaggtccaactccaccccagatgcagccaagtcagccaggacccatgatgcctgcagag
caacaagtgatgagccaacccagtagaggcccttcacctttcagtcctgttcagttgcat
cagctccgagctcagattttagcatacaaaatgctggctagaggacagccaatccctgac
aacattcagcttgctgtacaagggaaaaggtcactgcccgggattcagcagcaacagact
ctttacagagcatgcgcagctcttcccattgttggacaaggagttgcttcagggatgcca
ggacttacagctgccatggctccaaagacttggccagaagggcaaggagtggatatgaat
gcttcaagtacaccccaaaaactggctgtgccacctccaagtggaaggccgtcacctgcc
cctgctgctacccagcctccagctgtaatgccaggtccttctgtaccacagcctgcagct
agtcagccttcacctattgttcagctgcagcaaaaacagaatcgtatcagccccatccaa
aagcctcaggggctggatcctgttgaaattcttcaggaacgggaatataggcttcaggct
cgaattgcacacagaattcaggaattagagaatttgcctggttctttacctccagatctg
aggactaaagccacagtggagctgaaagcgcttaggctactgaatttccaacgccagctg
cgacaagaagtagtggcgtgcatgcgtcgtgacacaactttggagactgctctgaactcc
aaggcatacaaacgcagcaagcggcagaccctgagggaagcccgaatgactgagaaactt
gagaaacaacagaaaatagagcaggagagaaaacgtagacagaagcaccaggaatatctc
aatagcattttacaacatgctaaagattttaaagaataccatcggtcagtggctggaaaa
attcagaagctttccaaagctgtggctacttggcatgccaacacagaacgcgaacagaag
aaagaaacagagaggattgagaaagaacgaatgagaaggctgatggctgaagatgaagaa
ggctatcgcaaactcattgaccagaaaaaagacagacgtctagcctatctgctacagcaa
actgatgaatatgtggccaatttgacaaatttggtgtgggaacacaagcaagcacaagct
gccaaagaaaaaaagaagaggagaagaagaaagaagaaggtagaagacaacacggaggga
ataggatctggacttggtcctgatggagaactcatagatgagagcagtcagatgagtgat
ctcccggtcaaggtaactcatacagaaacaggcaaagttctccttggaccagaagctcct
aaagcaagtcaattggatgcttggttagaaatgaacccaggctatgaagttgcccccaga
tcagacagtgaagatgaaagtggatcagaatatgaagaagatgaagatgaagatgagtca
agtagacaagaaacagatgaaaagagacatctggatcccaacattgaagatgtttcagaa
agagacgctaaacaaatcattgagacagccagacaagatgtggatgatgaatatagcatg
cagtacagtgccagaggatctcagtcttactacacagtggctcatgcaatttctgagaag
gtggaaaagcagtcctctctccttatcaacggcaccctgaaacattaccaggtccagggc
ctggaatggatggtttccttgtataataacaatttgaatggaattttagctgacgaaatg
gggctaggaaagaccatacagacgattgcgctcatcacttacctgatggatcacaaaagg
cttaatggaccttatctcatcattgttcccctctcgactttatccaactggacatacgag
tttgacaaatggggcccttctgtggtgaagatttcttacaagggtacacctgctatgcgc
cgatcgcttgtaccacagctacgtagtgggaaatttaatgttcttttgactacatatgaa
tacatcataaaggacaaacacattcttgctaagattcggtggaaatatatgattgtagat
gaaggtcaccgaatgaagaaccatcactgtaaactgactcaggtgctcaatactcattat
gtggcaccaagaaggatcctcttgacaggaacgccattgcaaaacaaactacctgaactt
tgggctctccttaattttctcctccccaccattttcaagagctgcagcacttttgaacag
tggttcaatgctccttttgccatgactggagaaagggtggatttaaatgaagaggaaact
attctgattatccggcgtctccataaagttctaagacctttcttgttaagaaggttgaag
aaagaggtcgaatctcagttaccagaaaaggttgaatatgtgataaaatgtgatatggca
gccctgcagaagattctgtatcgccacatgcaagccaagggaatccttcttactgatggc
tcggagaaagacaagaagggaaaaggtggagccaaaacactcatgaataccatcatgcag
ctgaggaaaatatgcaatcacccatatatgttccaacatattgaggaatcctttgctgaa
catttgggttattcgagtggtgttatcaatggagctgagctttatcgggcttccgggaag
tttgagctacttgatcgaattctaccaaagttacgcgccactaatcatcgtgtgcttctt
ttctgtcaaatgacatcccttatgactattatggaagattactttgcttttcgaaacttt
gcttatttgcgacttgatggaacaacaaagtcagaagatcgagcaactctgctgaagaaa
ttcaatgagcctaattcccaatactttatttttctgctgagcacaagagcaggaggtctg
ggtttgaaccttcaggcagctgatactgttataatttttgacagtgattggaatccacac
caggacttgcaggcacaagacagagctcatcgaatcggacagcagaacgaagttcgagtc
ttacgattgtgcacagtgaacactgtcgaggagaaaatcttggcagctgcgaagtataaa
ctgaatgtggatcagaaggttattcaggctggcatgtttgatcaaaaatcttcaagccat
gagcgaagagcttttctccaagccatattggaacatgaagaagaaaatgaggaagaagat
gaagttcctgatgatgagactctgaatcaaatgattgcacggaatgaagaggaatttgaa
cttttcatgcgaatggacatggataggcgcagggaggatgctcgaaatccaaaacgcaaa
ccgcgcttgatggaggaagacgagttgccatcttggatcatcaaagatgatgctgaagtt
gaaaggcttacatgtgaagaggaggaggaaaaaatatttgggagagggtcccgtcaacgt
agggatgtggactacagtgacgctttgacagagaaacagtggttacgggcaattgaagac
ggcaacttggaagaaatggaagaggaggttcggcttaaaaaacgtaaaaggagaagaaat
gtggacaaggattcgggcaaagaagacggcgagaaggcaaaaaagaggagaggaaggccc
ccggctgaaaaattgtcacccaatccacctaaattgacaaagcaaatgaatgccataatt
gatacagtgatcaattataaggacagttcaggacggcagttaagtgaagtcttcattcag
ctgccttctcgaaaagaatatccagaatattatgagttaattagaaaaccagtggacttc
aaaaaaattaaggaaagaattcgtaatcataaatatcggagtatcagtgacttggagaag
gatgtgatgttgttgtgtcacaatgcccagaccttcaacttagaaggatcacagatctat
gaggattccattgttcttcagtcagtcttcaaaagtgcacggcagaagcttgtgaaagaa
gatgaaagtgaggaagacagcaacgaggaagaagaagatgaggaagacgagtcagaatcc
gaatcaaaatctgtgaaagtgaaaattaagctaaacaaaaaagaggacaaaaaccgagat
aaagggaaaggcaagaaacggcaggttcggctcaaagcccaaccggttgtgagtgatgat
gatactgatgaggatcaagatgaaaatgaccagtcagaagcaagtggaagtgacgacgag
tga
DBGET
integrated database retrieval system
