Crotalus tigris (Tiger rattlesnake): 120317703
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Entry
120317703 CDS
T08476
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120317703 (NELFCD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120317703 (NELFCD)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
120317703 (NELFCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
120317703
NCBI-ProteinID:
XP_039220444
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MEEPEYFGGGVAEWGDDTDGAGQDDEYGGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKR
YFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGAEPIHVQETVENHLKSLLIKHFD
PRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEI
TSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQAIMSIL
AQEEQGGSAVRRIAQEVQRFAHEKGHDASQITLALGTAASYPRACQALGAMLSKGALNPA
DITVLFKMFTSMDPPPVELIRVPAFLDLFMLSLFKPGAKINQDHKHKYIHILAYAASVVE
TWKKNKRVSINKDELKSTSKAVETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVL
KWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPLVLQLLVKLFETEHSQLDVME
QLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTSD
FVQLFLPILENDSIAGTIKTEGEHDPVTEFIAHCKSNFIMVS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaggagccggagtactttgggggcggcgtggcggagtggggcgacgacaccgacgga
gcagggcaggatgatgaatatggaggcgaagatgatgctgaggttcagcaggaatgcctt
cataaattttccacccgagattacatcatggagccctccatttttaatactttaaagcgg
tacttccaagcaggtggttctccagagaatgtgattcagctcttatcggagaattacact
gctgtggctcaaacagtgaatcttttggctgaatggcttattcagacaggtgctgaacct
attcacgtccaggaaacggtggaaaaccacttaaaaagtttgctgattaaacactttgat
ccacgtaaagcagattccattttcacagaggagggagagactccagcatggctcgagcaa
atgatagcacacacaacatggcgagacctcttttacaagctggctgaagctcatccagac
tgtctcatgctgaactttactgtcaagcttatctccgatgctggataccaaggggagatc
accagtgtatcaacagcttgccagcagttggaagttttttctcgtgtactgcggacatct
ctggctactatcttagacggtggagaagaaaatctggagaagaacttaccagagtttgct
aaaatggtgtgccatggtgaacacacatatctttttgctcaagctataatgtccatatta
gcacaagaagaacaagggggctctgctgtgcgtagaattgctcaagaagtccagcgattt
gctcatgagaaagggcacgatgccagtcagatcaccctagcgttgggcactgcagcttcc
tatccccgtgcctgccaagcccttggtgccatgctgtcgaaaggagctctgaatccagca
gacatcacagtcctcttcaagatgttcacaagcatggatcctcctcctgtagaactgatt
agagttccagcttttttagatctctttatgctgtcactgtttaaaccaggagcaaagatc
aatcaagaccataagcacaaatatatccacattttggcctatgcagctagtgtggtggaa
acatggaaaaagaacaagagggtgagcatcaataaagatgagctcaagtccacttcaaaa
gcagttgaaacagttcacaatctttgctgcaatgagaataaaggcgcctcggagcttgtc
gcagagctaagtaccctgtatcagtgcatcagatttccagttgtagccatgggggtatta
aaatgggttgactggacggtgtcagaaccccgatatttccagcttcagacagatcacact
ccggtgcatttggccctgttggatgagatcagcacctgccaccaactgctccatcctcta
gttttgcagcttctggtcaaactttttgaaactgagcactctcagcttgatgtcatggaa
cagctggaacttaagaagactcttctggacagaatggttcacttgttgagccgtggctat
gtcctcccagtggtcagctatatccggaaatgcctggagaagttggacacggatatatct
ctgatcagatattttgtgactgaggtactggatgtgattgctcctccctacacctctgac
ttcgtgcagctttttcttccaattctggaaaatgatagcattgcaggaacaattaagaca
gaaggtgaacatgacccagtgacagagttcatagctcactgcaaatcaaatttcatcatg
gtcagctga
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