Crotalus tigris (Tiger rattlesnake): 120317794
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Entry
120317794 CDS
T08476
Symbol
SHARPIN
Name
(RefSeq) sharpin isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04217
Necroptosis
ctig04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120317794 (SHARPIN)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120317794 (SHARPIN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120317794 (SHARPIN)
Enzymes [BR:
ctig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120317794 (SHARPIN)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120317794 (SHARPIN)
Multi subunit type E3
LUBAC complex
120317794 (SHARPIN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
IBR
ubiquitin
IBR_1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
120317794
NCBI-ProteinID:
XP_039220601
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MAAAPDSSSAAAAPGGLVVLASARALSSPPLAPPGAREAQRLLRLQLSAAPGPERFRLGL
RGGPDSGPEPGLVEEYGLREISYEARSGTCHELKVLARPDHPLLFHFEDEQEAQAWWAAV
SSSLREVQKEGSTGLTGRPPAQPLATPTALPVETAKKEDLVVHLSAAIELGNEEEAMRCA
SLLAQQHTALHIQLKESCYPASQISMKVQVEDASCSANITARVHTHTTIAALRHQVFQDY
GFHPTVQRWIIGQCLCVDNRTVGSYGIRKDGDTAFLYLLSAKGANLSEQRYKEDKDWVVL
QPPPSSIPGSSDGRHRGIASSLPNKGGKEPNRKTDIGEITRFLDSVHMSKILPCRTRSPT
IPAAGPNSPVQAGWSCPTCTFINKPTRPGCEMCSTDRPAGYVVPGSYRPDEVERWRMQQE
KEGILQYQKAREQERRQNFQQLCQLEDEALVPNQEEMECRICYLKVEPGNGVMLRECLHS
FCRDCLRQLVNCNQDPQVSCPFRDDSYACTSHLQDREIRALVTWAEYERFLEHRLAVAES
RAQNSYHCRMADCLGWCVYEDDVNEFRCPICWALNCLVCKAIHEGMNCKQYQDKLRSQAH
NDAAARETNNMLKTLVQLGEAMHCPACRIVVQKKGGCDWIRCPVCQTEICWVTKGPRWGP
GVRVLSGEKARRAKVFLLGRGLRHPLPREQARPLPALVLSQTTQPLSLVVLWGAHRSSAW
VR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgccggactcgtcctcggcggccgctgcgcccggcgggctggtggtgttg
gcctcggctcgggccttgtcctcgccgcctctggctccgccgggcgcccgggaggcgcag
cgcctgctccgactccagctgagcgcggctcccggcccggagcgcttccgcctcggcctg
cgcggcggcccggactccggccctgagccgggcctggtggaggagtacgggctgcgtgag
atctcctacgaggcccggagcggcacctgccacgagctgaaggtcctggcccggcccgac
cacccgctgctctttcacttcgaggacgagcaggaggcgcaggcctggtgggcggcggtc
agcagctccctccgcgaggtgcagaaagaaggaagcactgggctcactggacgcccccct
gcccagcctttggccaccccgaccgcccttcccgtggagacagcaaagaaagaagacctg
gtggtccatctttctgcagccatcgaacttggaaacgaggaggaggccatgcggtgcgct
tccttgcttgcccagcagcacacagccctgcacatccagctgaaggagtcctgctaccct
gccagccagatcagcatgaaggtgcaagtggaagacgcctcctgctccgccaacatcacg
gcccgggtccacacgcacaccacaatcgctgccctcaggcaccaggtctttcaggattat
ggattccaccccactgtccagcgctggattattgggcaatgcctgtgtgtggacaaccga
acggttgggtcctatggaatccggaaggatggcgatacggccttcctctacctgctctca
gctaagggagccaacctctccgagcagcgttacaaggaggacaaggactgggtggtgctc
cagccacccccctcctccatccctggcagctctgacggccggcacagaggcatagccagt
tctttgccgaacaaaggcgggaaagagcccaacaggaagacggacattggagagatcact
cgcttcctggactctgtgcatatgagtaaaatccttccgtgccgcactcgatcccccacg
atcccagctgctggccccaattctcctgtgcaggccggctggtcatgtcccacctgcacg
ttcatcaacaagcccacccgccccggctgcgaaatgtgcagcactgaccgccctgctggc
tatgtggtccctgggagctaccggccagacgaggtggagcgctggcggatgcagcaggag
aaggagggcatcctgcagtatcagaaggctcgggagcaggagcggcggcagaatttccag
cagctgtgccagctggaggacgaggctttggtgcccaaccaggaggagatggaatgccgg
atctgctacctgaaggtggagccgggcaacggggtgatgctgagagagtgtctgcacagc
ttctgcagagactgcctgcgccagctggtcaactgcaaccaggacccccaggtgtcctgt
cccttccgggacgattcctacgcctgcaccagccacctccaagaccgggagatccgggcg
ctggtgacctgggccgagtacgagcgcttcctggagcaccggctggctgtggccgagagc
cgggcgcagaacagctaccactgccggatggccgactgcctcggctggtgcgtctacgag
gacgacgtcaacgagttccgctgccccatttgctgggccctgaactgcctcgtctgcaag
gccattcacgagggcatgaactgcaagcagtaccaggataagttacgctcccaggctcac
aatgatgctgctgcccgggagactaacaacatgctgaagacgctggtgcagctgggggag
gccatgcactgccccgcctgccgcatcgtggtgcagaagaagggcggctgcgactggatc
aggtgccccgtctgccagacagagatctgctgggtgaccaaagggccacgttgggggccg
ggggtacgtgtcctcagtggggagaaggcaaggagggccaaagtcttcctgctggggagg
gggctaaggcaccccctgcccagggagcaggccaggcccctccctgctcttgtgctgtcc
caaaccacccagccgctgagcctagttgtcctctggggagcccacaggtcttctgcctgg
gtccgatag
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integrated database retrieval system
