Crotalus tigris (Tiger rattlesnake): 120317966
Help
Entry
120317966 CDS
T08476
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctig00535
]
120317966 (COL14A1)
Proteoglycans [BR:
ctig00535
]
Extracellular matrix (ECM) proteoglycans
Others
120317966 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_3
DUF4992
Motif
Other DBs
NCBI-GeneID:
120317966
NCBI-ProteinID:
XP_039221013
LinkDB
All DBs
Position
Unknown
AA seq
1881 aa
AA seq
DB search
MGRTDTHQSKVMSWFLFGFIAVSLQLSDPVLSQVAPPSRLRYTVIGPDSIQISWKAPKGR
FDGYKLLITPSSGGKTNELMLQNNANKAIIQGLIPDQSYIVQIVAFAQDQESKAAQGQFR
IKDLEKKKDTSGKPKPKEVGKPKPPMPTEDTELMPLPKPEENQFKCKTPAFADIVILIDG
SWSIGRFNFRLVRLFLENLIIAFNVDSEKTRIGLAQYSGDPRIEWHLNSYNTKEAVLDAV
RNLPYKGGNTLTGLALTFILENNFKPEAGSRPGVPKIGILITDGKSQDDVIPPAKNLRDA
GVELFAIGVKNADENELKEIASEPHTTHVYNVADFNLMNSIVEELTKTVCLRVEEQEKEI
KGSLVATLGAPTDLVTSEVTARGFHVSWTHAPGKVEKYRVVYYPTKGGQPEEVVVDGTVS
TAVLKNLMSLTEYQIAVFAIYVSSASEGLRGTETTLALPMASDLELYDVSHNSMKVKWNA
VAGATGYMILYAPLIDGLAAEEKEMKIGVSSTHVELEGLLPNTEYTVTVYAMFGEEASDP
LTGQETTLPLSPPRNLKFSNVDHSSVKITWDPASPKVKGYRIMYVKTDGTETNEEEVDQV
SAYTLKSLTSLTEYTVAVFSLYSEGQSEPLTGSFTTKKVPSPEFLEITEVSTESLTISWK
PPSSDVALYRLAWIPLTGEEADEIILSGDVDTYEIEGLLPNMEYEVSLMALFDDESESDV
VAVLGTTLEILTTEVTTITIASTTTTQPTTAVIRTGMKNLMVEDETTSSLKVKWDITDLS
VSQFRVTYLKADGGHGEETVTVPARQNNVLLQSLLSDTEYKIMVTPIYADGEGVSLSAPG
KTLPLSPPQNLKVSDEWYNRLRISWDAPRSPTMGYRIVYKPVNISGPALETFVGDDVNTI
LILNLLSGTEYNVKVFASYPTGFSEALTAVAKTLRLGVTNLGAYQTRMTSLCAQWQPHRH
ATAYRIVIESLTDGAIEEEPLGWGASRHCFYQLFPGTKYNISVYAQVQEFEGPAVSIIGA
TLPYPTEPPPTPSTTTPQPTIPPAKEVCKAAKADLVFLVDGSWSIGDANFNKIIGFLYNT
VGALDKIGPDGTQVAIAQFSDDPRTEFKLNAYRSKETLLHAIQHIAYKGGNTKTGRAIKH
AQQILFTLESGTRKGIPKVLVVITDGRSQDDVNQVSREMQLDGFSIFAIGVADADYAELV
NIGSKPSERHVFFVDDFDAFKKIEDELITFVCETASATCPLVNKDGNSLAGFKMMEMFGL
VEKEFATVEGVSMEPGTFNAYHCYGLHKDALVSQPTKYVHPEGLPSDYTITFLFRILPET
PLEPFALWEILNESYEPLVGVILDNDGKTLTFFNYDYQGEFQTVTFEGSDIKKMFYGSFH
KLHIVISKTTAKVVIDCKEVGEKSISAAGNITSNGIEVLGRMVRSRGPRDSSAPFQLQMF
DIVCSTSWANRDKCCELPALRDEEGCPALPHSCSCSEVSKGSPGPAGPPGGPGLRGPKGS
RGDDGPKGPDGPRGEIGTPGPQGPPGPQGPSGLSIEGPPGPTGEKGDRGETGHPGLQGIP
GPTGSPGRDGSQGPRGLTGKDGPSGPPGSSGPVGIPGAPGVPGIMGNVGPQGDAGPPGLP
GVKGEKGERGDLQTHAMVRAVARQVCEQLIQTHLARYNSILNQIPSNSISTRTIPGPPGE
PGRQGLPGPQGEQGSPGSPGFPGNPGQPGTPGERGSPGEKGERGNPGIGNQGPRGPPGPA
GPPGESRTGTPGPSGSPGPRGTAGRTGPPGSQGTPGQPGYCDPSSCAGYGAGGGYGHPTD
QDIPVVPLTHNSYQLYDSEDPYEDQQEPYPGSYAYPHIAQPEFTPVDEEMEAAGISHFPR
RISKRSISSTKRNRSIKKTSQ
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaacggacacccatcaatcaaaggtcatgagctggttcctctttggcttcata
gctgtgtctcttcaactgagtgatcccgtcttaagtcaagtggctccaccatcaagatta
agatatactgttattggtcctgacagtattcagatttcatggaaagcccctaaagggagg
tttgatggatataaacttctcatcactcctagttcaggagggaagacaaatgagttgatg
cttcagaacaatgcaaacaaggcaattattcaaggtcttatccccgatcagagttacatc
gttcaaatagtggcctttgctcaagatcaggagagcaaagcagcgcaaggccagttccga
attaaagatctagagaaaaagaaggacacttcgggcaaaccaaaaccaaaagaggtgggc
aaaccgaagcctcctatgccaacagaggatacagaattgatgccccttccaaaaccagaa
gaaaaccaatttaaatgcaaaactccagcttttgccgacatcgttatcttgattgatggg
tcctggagtattggcagattcaacttcagacttgtgcgtcttttcttggaaaatctgatt
attgccttcaacgtggattctgaaaaaacaagaataggcctggcacaatatagtggtgat
cccaggatagaatggcatctgaattcctacaacacaaaagaggctgtcttagatgcagtg
cgaaacctcccctacaagggtggaaataccttaacaggccttgccttaacttttattttg
gaaaacaactttaagccagaggcaggttcaagacctggagttcccaaaattggcatactc
atcaccgatgggaaatcccaagatgatgtaattccacctgcaaaaaatctgagagatgct
ggcgtcgaactgtttgccataggtgtaaagaatgctgatgaaaatgaactgaaggagatt
gcttccgagccacacaccactcacgtctacaatgttgctgacttcaatttaatgaactcc
attgtggaagaacttacaaagactgtgtgcctgagagttgaagaacaagaaaaagaaatc
aaagggtcgctggttgccacccttggagcacctacagatttggtcacatctgaagtgacc
gccagaggattccatgtgagttggactcatgcaccaggcaaagtggaaaagtaccgagtt
gtctattatcccaccaaaggagggcaaccagaagaggtggtggtagatggaacggtttca
acagcagtactgaaaaatttgatgtctttaacggagtatcagattgctgtgtttgccatc
tatgtcagctctgccagtgaaggtctccggggtactgagacaacacttgcattgccaatg
gcgtccgatttggagttgtatgatgtctcacacaacagtatgaaagtaaagtggaatgca
gtagccggtgcaactggttatatgattctgtacgcgcccctcattgatggcttagcagca
gaggaaaaggagatgaaaattggagtaagctccacacatgttgaacttgagggtctgcta
cccaacacagaatacacagtcactgtttatgcaatgtttggggaagaagccagtgatcct
cttacaggacaagaaacaacattgcctttaagtcctccacgaaatttgaagttttcaaat
gtggatcacagctcagtcaaaataacttgggatccagcttccccaaaagtcaaaggatat
cgcattatgtacgttaagacagatgggaccgaaaccaatgaggaagaggtcgatcaagta
tcagcctatactttgaagagcttgacatcgcttactgaatatactgtagccgttttctcc
ctctatagtgagggtcaatctgagccactcaccggcagctttaccacaaagaaagttcca
tcacccgaatttttggaaattactgaagtatctactgaaagcttaacaataagctggaag
ccaccatcctctgatgtggctctttaccgtctagcctggatcccattgacgggcgaagaa
gctgatgagatcatcttaagtggagatgtggacacctatgagattgaaggcttgttaccc
aatatggaatatgaggtgtctttgatggccctctttgatgatgaaagtgaaagtgatgtt
gttgctgtacttgggaccacacttgaaatactgactactgaagtaactaccataactata
gcaagtactactactactcagcctacaacagcagtcattcggacaggaatgaaaaatctc
atggttgaagatgaaactacctcaagtttaaaagtcaaatgggacattacagacctcagt
gtttcgcagttcagggtgacctatctgaaggctgacggtggtcatggggaggaaacggtt
acagtccccgcaaggcaaaacaatgtgcttcttcagtctttgctctcagacactgaatat
aaaattatggtcaccccaatctatgctgatggagaaggagtcagtttgtcagctccagga
aaaactctgcctctttctcctccacaaaatctgaaagtctctgatgaatggtataatcga
ttaaggattagctgggatgcgcctcgatcccccacaatggggtataggattgtatataaa
cctgtgaatatttctggaccagcacttgaaacctttgtgggcgatgatgtcaacactatc
cttatcttgaatttgcttagtgggacagagtataatgttaaagtatttgcttcttaccca
actggatttagtgaagccttaacagctgttgccaaaacattgcgtttgggtgtgacaaac
ttgggagcttatcaaacccgaatgacaagcttatgtgcccaatggcagccccatagacac
gcaactgcttacagaattgtaatagaatctcttactgatggggcaatagaagaagaaccg
ttaggttggggggcatctaggcattgcttctatcaactctttcctggcacaaaatataat
atcagtgtttatgcacaagttcaggaattcgaagggcctgctgtcagtataataggggca
acactgccatacccaaccgaaccgccaccaactccttcaaccaccactccacagcctacg
attcctccggcaaaggaagtttgcaaagctgcaaaggctgacctggtatttttggtggat
ggatcttggagtattggagatgcaaatttcaacaaaataattggctttctatataacact
gttggtgctcttgacaagattggtcctgatggaactcaggtggcaattgcccagttcagt
gatgatccaaggacagaatttaaattgaatgcctacagaagcaaagaaactctactgcat
gccattcagcacatagcctacaaagggggaaacaccaaaacaggcagagcaattaaacat
gcacaacagattttatttactttggagtctgggaccaggaagggaatcccaaaagtttta
gtagtgatcacagatgggcgatctcaagatgatgtgaaccaagtttccagagagatgcaa
ctagatggattcagtatatttgccattggagtagcagatgctgattacgcagaactggtt
aacattggcagcaagccaagcgagagacacgtgttctttgtggatgactttgatgccttc
aagaagattgaagacgaactgatcacttttgtctgtgaaacagcctctgcaacttgccca
ctggtgaataaagatggcaatagtttagcagggtttaaaatgatggagatgtttggcttg
gttgaaaaagagtttgcaactgtggaaggagtatctatggaacctggaacgtttaatgcc
tatcactgttacggactgcataaggatgctttggtctctcagccaaccaaatatgtacat
ccagaaggtcttccatcagattacaccataacgtttctcttccgcatccttcccgaaaca
cctctggagccatttgcactgtgggagattttaaatgaaagctatgagccattggttgga
gttattttggataatgacggcaaaactttgactttcttcaattatgactaccaaggggaa
ttccagacggtaacttttgaagggtctgacataaagaaaatgttttatggaagtttccat
aagctgcatatcgttatcagcaaaaccaccgctaaagtagtgattgattgcaaggaagtg
ggtgagaagagtatcagtgcagcaggaaatatcacttctaatgggattgaagtcctggga
aggatggttcgatcaagaggaccaagagacagttctgcaccattccagctgcagatgttt
gatatcgtttgctccacttcatgggccaatagagataagtgctgtgaacttccagctttg
agagatgaagaaggctgccctgcccttccacattcttgctcctgctctgaagtcagcaaa
ggatctcctgggccagcaggaccccctggtggtccaggtctccgaggtccaaaaggtagc
cgtggtgatgatggtccaaagggacctgatggacctcgaggtgaaattggtactccgggt
ccccaagggcctccaggcccacaagggccaagtggactttcaattgaaggacctccggga
ccaaccggagaaaaaggagataggggagaaactggacacccaggtcttcagggtattcca
ggacctacagggtcaccgggacgtgatgggagccaaggtccaaggggcctaacaggcaaa
gatggaccaagtggacctccaggttcctcaggaccagtgggaatacctggtgctccaggt
gtcccaggaattatgggtaatgttggcccacaaggagatgctggaccacctggacttcct
ggagtaaaaggcgagaaaggtgaacgtggagatcttcagacccatgcaatggtacgggca
gtagctcgtcaggtgtgtgaacagcttatccaaactcatctggctaggtacaactcaatc
ttaaatcagattccaagcaactcgatctccacgcggactatcccggggccccctggagaa
ccaggacgacaaggcttacctggaccacagggagagcaaggatctccaggaagcccaggt
tttcctggcaatcctgggcaacctggaacaccaggagaaagaggctcaccgggggaaaag
ggagaacgaggtaacccaggtatcggaaaccaaggcccacgaggtcctccagggccagca
ggacctccaggtgagagtcgaactggcactcctggaccttcagggtcacctggtcctaga
ggaacagcaggtcgcacaggtcctcctggatcacagggaacacctggacagccagggtac
tgtgatccttcctcttgtgctggttatggagcaggtggtggctacgggcatccaacagat
caagacattccagttgtgccattaacccataactcctaccaactgtatgattctgaggat
ccttatgaagatcaacaagagccctatccaggatcctatgcttatcctcacattgcacaa
ccagaattcacaccagtggatgaagaaatggaggctgctggaataagccactttccgagg
agaatctccaaaagaagcatcagctctacaaaacgcaatcggtcaattaaaaaaacctca
caatga
DBGET
integrated database retrieval system
