Crotalus tigris (Tiger rattlesnake): 120318166
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Entry
120318166 CDS
T08476
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120318166 (SUPT6H)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120318166 (SUPT6H)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120318166 (SUPT6H)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120318166 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
Tex_YqgF
SH2
Tex_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
120318166
NCBI-ProteinID:
XP_039221449
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYDEDGEVVSRPPKKFVEDEDEEEEEENLDDQDEQGNLKGFINDDD
DEEEEEEEEASDSGDSEDDVGRKKRKRNFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDKEEDYGQEEHEKEAIAEEIFQDGEGEEGGDGGDGHLAAAEDEEDEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEDEYDYE
PEETEGEIRVRPKKTAKKRVSRRSIFEIYEPSELESSHLTDQDNEIRVTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFAMPTISLQESSDYLDRGQSSSSFSRKGPSTIQKIKEAL
NFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWHWDEKWTQLKIRKQNLTRLFEKMQAY
QYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAK
ASRKKHKRIREDGEEEEGEGEDGEDEEQKGPELKQASRRDLYTICQAAGLDGLAKKFGLT
PEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGACYMVALQIAREPLV
RQVLRQTFQERAKINVAPTKKGKKDVDEAHYAYSFKYLKNKPVKELRDEQFLKIFLAKEE
NLLTIDISVDMKGVEGYGSDQTYFEEIKAFYYRDEFSHQVQEWNRQRTLAIERALRHFLY
PQMAKELMNRLLLEAKECVMKACSRKLYNWLKVASYRPDQQVEEEEDFLDESQGKGIRVL
GIAFSSARNHPVFCALLNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDTETLKKFLLG
KKPHVVIIGGENRDAQMLVEDVKRIVHELEQGQQLSSIGVELVDNELATLYMNSKKSEAE
FRDYPPVLRQAVSLARRIQDPLVEFAQVCSQDEDILCLKLHPMQDHVEKEQLLNALYCEF
INRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGAHLLKILKQNNTRLENRTQLVTMCH
MGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAED
ANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRSPYR
SPNSEEVFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQ
QDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFVPTKFLSDKAVKRPEERVKVGMT
VHCRIMKIDIEKFSADLTCRTSDLMDRSNEWKLPKDAHYDFAAEAADHKQEEELKRKQQR
TTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVVIRPSSKGENHLTVTWKVCDNIYQHVD
VREEGKENAFSLGATLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYHECNGGDRKR
LEELLIKTKKEKPTFIPYFICACKDLPGTFLLGYQPRGTPRIEYVTVTPEGFRYRNHIFP
TVNGLFRWFKDHYQDPVPGVTPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQ
MFSAIAAVTGQGQNANATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLLTPSYS
YTTPSQPITTPQYHQLQASTTPQSTQSQPSSQQPSSSSGQRQPPKSSSQAPIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSVAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcgtggaaagcgaagctgaggaatcagaggaggagtatgacgaagacggg
gaagtggtctcgagacccccaaaaaagtttgtggaagatgaagatgaggaggaggaagaa
gagaacctggatgaccaggacgagcaagggaacctgaaaggcttcatcaacgacgatgac
gacgaggaagaggaggaggaggaagaggccagcgattccggagactcggaggatgacgtc
ggccgcaagaagaggaaacgcaattttgacgaccgcctggaggacgatgacttcgacctc
attgaagaaaacctgggcgtcaaagtgaaacggcaaaaattcaggcgggtacggaaaatg
tccgacgacgaagacgacaaggaggaggactacggccaggaggagcacgagaaggaagcc
attgcggaagagatcttccaagacggggaaggcgaggaggggggcgatggaggcgacggg
cacctggccgcggctgaggatgaggaggacgaagaggaagacgagtctgacatcgatgac
ttcattgtggacgatgatgggcaacctctgaagaagcccaaatggaggaagaagctcccc
ggatacacagacgcagccttgcaggaagcccaggagatcttcggcgtggactttgactac
gatgagtttgagaaatacaacgaatacgatgaggagatggaggacgagtacgactacgag
ccggaagagacggagggcgagatccgcgtccggcccaagaagacggccaagaagcgggtc
agccgccgcagcatctttgagatctacgagcccagcgagctggagagcagccacctgacc
gaccaggacaacgagatccgggtgaccgacatgcccgagcggttccagctgcgctccatt
cccgtcaagagcgcggaagacgacgagctggaagaggaagcagactggatctaccggaac
gccttcgccatgcccaccatctccctgcaggagagttcggactacttggaccgtggccag
agcagcagcagtttcagccgcaaaggtcccagcaccatccagaagatcaaggaggccctc
aacttcatgaggaaccaacattttgaggtccccttcatcgccttttaccggaaggagtac
gtggaacccgagctgcacatcaacgacctctggagagtctggcactgggacgaaaagtgg
acccagctgaagatccgtaagcagaacctgacccggctcttcgagaagatgcaggcctac
cagtacgagcagatctctgctgacccggacaagcccctggctgacggcatccgggccctg
gacaccaccgacatggagaggctgaaggacgtgcagtcgatggacgagctgaaggacgtc
tacaaccacttcctgctctactacggccgagacatccccaaaatgcagaacgccgccaag
gccagccgcaagaaacacaagcggatccgggaggatggcgaggaggaggaaggcgaggga
gaggatggagaggacgaagagcagaaggggccggagctcaagcaggcctcccgccgggac
ctgtacaccatctgccaagcggccggtctagacgggctggccaagaagttcgggctgacc
cccgagcagtttggggagaacctccgggacagctaccagcgccacgagaccgagcagttt
cctgcagaacccctggagctggccaaggactacgtctgcagccagttccccagccctgag
gccgtgctggagggggcctgctacatggtggccctgcagatcgcccgggagcccctggtc
cgacaggtgctgcgacagactttccaggaacgggccaagatcaacgttgcccccaccaag
aagggcaagaaggacgtggacgaggcccattacgcctactccttcaagtacctgaagaac
aagccggtcaaggagctgcgagacgagcagttcctgaagatcttcctggccaaagaggag
aacctgctgaccatcgacatctccgtggacatgaagggcgtggagggctacggcagtgac
cagacctacttcgaggagatcaaggccttctactaccgcgacgagttcagccaccaggtg
caggagtggaaccgccagcgcaccctggccatcgagcgggctctgcgccacttcctctac
ccgcagatggccaaggagctgatgaacaggctgctgctggaggccaaggagtgcgtcatg
aaggcctgtagccggaagctgtacaactggctgaaggtggcctcctatcgcccagaccag
caagtggaggaggaggaggacttcctggacgagagccaagggaagggcatccgggtgctg
ggcatcgccttctcctcggccaggaaccacccggtcttttgcgccctgctcaatggggaa
ggagaagtcacggatttcctgcgcctgccccatttcaccaagcggaggaacgcctggcgg
gaggaagagagggagaagaaggctcaggatactgagaccctgaagaagttccttctcggg
aagaaaccccacgtggtcatcattgggggagaaaacagggatgcgcagatgctggtggaa
gacgtgaagcggattgtccacgaactagaacagggccagcagctctcatccatcggcgtg
gagctggtggacaacgaactggccaccctttacatgaacagcaagaaatcggaggccgaa
ttccgggactacccgccggtcctgcgccaagccgtctccctcgcgcgacgcatccaggac
ccgctggtggagtttgcccaagtctgcagccaggacgaggacatcctctgcctgaagctg
caccctatgcaggaccacgtggagaaggagcagctgctgaacgccctctactgcgagttc
atcaaccgggtgaatgaggtgggcgtggacgtcaaccgggccatcgcccacccccacagc
caggccctcctgcagtacgtctgcggcctggggccccggaagggcgcccacctgctgaag
atcctgaagcagaacaacacccggctggagaaccggactcagctggtcaccatgtgccac
atgggccccaaagtctttatcaactgcgccggcttcatcaagatcgacacggcctcgctg
ggagacagcacggattcctacatcgaggtgctcgacggctccagggtccacccggagacc
tacgaatgggcgcggaagatggccgtggatgctctggaatacgacgagtcggccgaagac
gccaaccccgccggggccctggaggagatcctggaaaacccggagcgtctgaaggatctg
gacctggatgccttcgcggaagagctggagaggcagggctacggcgacaaacacatcacc
ctgtacgacatccgagcggagctgagttgccgctacaaggacttgcgcagcccgtatcgc
tcacccaactccgaggaggtcttcaacatgttgaccaaggagaccccggagaccttttac
atcggtaaactgatcatctgcaacgtgacgggaatcgcccatcgtcggccgcaaggagaa
agctacgaccaggctatccggaacgacgagacgggcctctggcagtgccccttctgccag
caggataacttcccggagctgagcgaggtttggaaccatttcgatagcggctcctgcccc
ggtcaggccattggggtgaaaacccgtctggacaacggggtcaccggcttcgtccccacc
aaattcctcagcgacaaagcggtcaaacggccggaggaaagagtcaaggtggggatgacc
gtccattgcaggatcatgaagatcgacattgagaagttcagtgctgacctgacctgcaga
acctcggacctgatggaccggagcaacgagtggaagctgcccaaggacgcccactacgac
tttgcggccgaggccgctgaccacaagcaggaggaagagctgaagaggaagcagcagcgg
accacgtacatcaagcgggtgatcgcccacccctccttccacaacatcaacttcaagcag
gccgagaagatgatggagaccatggaccagggcgacgtggtcattcggcccagcagcaaa
ggggagaaccacctgacggtcacctggaaggtctgcgacaacatctaccagcacgtggac
gtgcgggaggagggcaaggagaacgccttcagcctgggggccaccctctggatcaacacc
gaggagtttgaggacctggacgagatcgtggcccgctacgtccagcccatggcctccttc
gcccgcgatctgctcagccacaaatactaccacgagtgcaacgggggagatcggaagaga
ctggaggagctgctgattaagaccaagaaggagaagcccaccttcatcccctacttcatc
tgcgcctgcaaggaccttccggggacgttcctgctgggctaccagccccgagggacgccc
agaatcgagtatgtgacggtgacgccagaggggttccggtaccgcaaccacatcttcccc
acggtcaatggcctcttccggtggttcaaggatcactaccaggaccccgtgccaggtgtc
actcccagcagcagcagccgaacccggacgcccgcctccatcaacgccacccctgccaac
atcaacctcgcagacctgacccgagccgtcaacgccttgccgcaaaacatgacctctcag
atgttcagcgccatcgctgccgtgaccggccagggccaaaacgccaacgccacccctgcg
cagtgggcttccagccagtacggctacgggggcagcggcggaggcagcagcgcataccac
gtcttcaccacgcccgcccagcagccggtggccacccctttgctgacccccagctactcc
tacaccaccccgagccagcccatcaccaccccccagtaccaccagctccaggccagcacc
accccccagtccacccagtctcagccatcctcacagcagccttcctccagctccgggcaa
cggcagccccccaagtccagctcccaggcgcccatcgactggggcaagatggccgaacag
tggctgcaggagaaggaggccgagcgccggaagcagaagcagcggctgacccctcggccc
tcgcccagccccatgatcgagagcacgcccatgtccgtggccggcgacgccaccccgctc
ctggacgagatggaccggtag
DBGET
integrated database retrieval system
