Crotalus tigris (Tiger rattlesnake): 120318289
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Entry
120318289 CDS
T08476
Name
(RefSeq) low-density lipoprotein receptor-related protein 1-like
KO
K04550
low-density lipoprotein receptor-related protein 1 (alpha-2-macroglobulin receptor)
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120318289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120318289
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ctig04090
]
120318289
Membrane trafficking [BR:
ctig04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120318289
CD molecules [BR:
ctig04090
]
Proteins
120318289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
cEGF
Vgb_lyase
SGL
EGF_LRP2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
120318289
NCBI-ProteinID:
XP_039221640
LinkDB
All DBs
Position
Unknown
AA seq
2426 aa
AA seq
DB search
MLPHRVEVGLLLLSLGILHMLIGIAPVFTLEVEDAIKVKPPNSPRAEWVLQPRPTPPKGR
DPNAWNRLKDQSFAPKTCSPKQFACKDQITCISKGWRCDGEKDCPDGSDESPDICPHNKV
SRCHPNEYNCLGTDLCIPMTKLCNGERDCVDGSDEGPHCRELLANCSSMGCQHHCAPTLN
GPVCYCDSSSQVAEDGKSCKDFDECSIYGTCSQTCTNHDGSYTCSCVEGYLLQPDHKSCK
AKNEPVERPPILLIANSQNIMATYLNGGPVSNISPTSTKQTTAMDFNYIEDKVCWVHVGD
SSPQTVLKCAKIPNLKGFVEEWTINISLNLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNK
SGVTCVTLLDLELYNPKGIALDPTMGKLFFTDYGQIPKVERCDMDGQNRTKLVDTKIVFP
HGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTIIQGILIEHLYGLTVFENYLYATNSD
NANTQQKTSVIRVNRFNSSDFQVVTRVDKGGALHVYHQRRQPKVRSHACEVDQFGKPGGC
SDICLLGNSHKTRTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGMDMGAKVPD
EHMIPIENLMNPRALDFHAETSFIYFADTTSYLIGRQKIDGTDRETILKDGIHNVEGIAV
DWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIEERMIHPRAIVVDPLNGWMYWTDWEE
DPKDSKRGKIEKAWMDGTNRSVFITSKTVLWPNGLSLDIPSKMLYWVDAYYDRIEMIMLD
GTERKMVYDGSELSHAFGLCHYDHFLFWTEYRSGSIFRLDQNTKAVTLLRNERPPLFEIR
MYDAQQQQVGSNSCRVNNGGCSSLCLAIPSGRRCACAEDQILGPDSVTCQANPSYVPPPQ
CQPGEFACKNSRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCENNRCIPNRWL
CDGDNDCGNNEDESNSTCSARTCPTNQFSCASGRCIPNSWTCDLDDDCGDRSDESASCAY
PTCFPLTQFTCHNGRCININWRCDNDNDCGDNSDEAGCSHSCSSNQFKCNSGRCIPVHWT
CDGDNDCGDYSDETHANCTNLATRPPGGCHIDEFQCRLDALCIPMRWHCDGDTDCMDSSD
EKNCEGVTHVCDPNVKFGCKDSARCISKAWVCDGDNDCEDNSDEENCEALVCKPPSHTCA
NTTSICLPPEKLCDGNDDCGDGSDEGQLCDLCSLGNGGCSHDCAVAPGEGIACSCPLGME
LGADNKTCQIQSYCAKHLKCSQKCEQFKYNVKCSCYEGWMLESDGESCRSLDPFKPFIIF
SNRHEIRRIDLHKGDYSVLVPGLRNTIALDFHLNQSSLYWTDVVEDKIYRGKLHENGALT
SFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRSTLLAGDIEHPRAIA
LDPRCGILFWTDWDASLPRIEAASMSGQGRRVIHKETGSGGWPNGLTVDYLEKRILWIDA
RSDAIYSALYDGTGHIEVLRGHEYLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVT
VVQRTNTQPFDLQVYHPSRQPVAPNPCEANGGKGHCSHLCLINYNGTYSCACPHLMKLDK
DNATCYEFKKFLLYARQMEIRGVDIDNPYYNYINSFTVPDIDNVTVVDYDALEQRIYWSD
VRTQTIKRAFINGTGVETVVSADLPNAHGLSVDWVSRNLFWTSYDANKKQINVARLDGSF
KNAVIQGLDKPHCLVVHPLKGKLYWTDGDSINVANMDGSNRSLLFTNQKGPVGLSIDYKE
NKLYWISSGNGTINRCNFDGSDLEVLETMKNQLRKATALAIMGDKLWWADQASEKMGTCN
KKDGSDAVVLRNSTTLVMHMKIYDEIIQQQGINPCSVNNGECSQLCLPTSDTTRSCMCTA
GYSLKSGQQSCEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHADNDT
IYWVDMGMSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARLN
GSFRYVVISQGLDKPRAITVHPEKGYLFWTEWGQYPRIERSRLDGTERVVLINSSISWPN
GISVDYEDGKLYWCDARTDKIERIDLETGDKREVVLSSNNMDMFSVSVFEDYVYWSDRTH
ANGSIKRGSKDNATEIVSLRTGIGVQLKDIKVFNRDRQKGTNVCAQNNGDCQQLCLYRGA
GQRTCACAHGMLAEDGVSCRDYDGYLLYSERTILKSIHLSDENNLNAPIKPFEDSEHMKN
VIALAFDYRHGSKGSNRIFYSDIHFGNIQQINDDGTGRRTLVENHHEIQVLGVKEEQEKP
GKQQVRENLGVQPVGYASLGYQQWCSLGEGKKGLKRTVPPKAINTCISQQIFTLGLCTKV
NPGFMTMTKIPVEGGVGERGTSLFVW
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccacagagtagaagtggggctgttgctgctttcactaggaattttgcacatg
ctaatagggatcgcccctgtttttactcttgaagtagaagacgcaatcaaagtgaaacct
cccaattccccgcgtgcggagtgggtgctgcagcctagacctacaccgcccaaagggaga
gacccgaatgcttggaaccggctgaaggaccagtcttttgcaccgaagacatgtagcccc
aaacaatttgcctgtaaagatcagatcacatgtatatccaagggctggagatgtgatgga
gagaaggactgtccagatggctctgacgagtcaccagatatatgtccacataacaaggtg
tcaaggtgccatccaaatgagtacaactgcctgggtactgatctttgcattcccatgacc
aagctttgcaatggcgaacgtgattgtgttgatggttcagacgaaggcccacactgtaga
gagcttctggcaaattgttcaagtatgggctgccaacaccattgtgccccaactctgaat
ggaccagtatgctattgtgacagttcctcccaagtagctgaagatgggaaaagttgcaaa
gattttgatgagtgttctatttacggtacctgtagccaaacctgcactaaccatgatggt
tcctacacatgcagttgcgtagaagggtatctgctccagcctgatcacaaatcttgcaaa
gccaagaacgaaccagtagaacgaccacccatcctgctcattgccaattcccagaacatc
atggctacctacctgaatggcggacctgtctctaacatcagccccaccagcaccaaacaa
actactgctatggatttcaactacatagaagacaaggtctgctgggtccatgttggcgac
agctccccccagaccgttctcaaatgtgccaaaatccctaatctcaaagggttcgttgag
gaatggactatcaacatctctctcaacttgcatcatgtggagcaaatggctattgattgg
cttactggcaacttctactttgtggatgacattgatgaccggatatttgtctgcaacaag
agtggggtcacctgtgttacactgcttgacttggagctgtacaatcctaaaggcattgcg
ctggatccaacaatggggaagcttttcttcactgattatggacagataccaaaggtggaa
cgctgtgatatggatgggcagaaccgtacaaaactggtggacaccaaaattgtcttcccc
catggtatcaccttggacttggtcaatcggcttgtttattgggctgatgcttaccttgac
tacattgaagttgtggactatgaaggaaaaaatcgacatacaattatccagggcattttg
atagagcatctctacggattgactgtctttgagaactacctgtatgccaccaattctgat
aacgccaatactcagcagaaaactagcgtcatccgggtcaatcgtttcaacagtagcgac
ttccaagtggtaacacgggtggacaaaggtggagctctacatgtctatcaccagcgacgg
caacccaaagtgaggagtcacgcctgtgaagtggaccagtttggaaaaccaggcggctgt
tctgacatctgtctccttgggaacagtcacaagacgcggacatgccgctgccggtcagga
ttcagcctcggcagtgatgggaagtcctgcaaaaagccagagcacgagcttttcctggtc
tatggcaaaggtcggccaggcatcattcgagggatggacatgggagccaaagtgcctgat
gaacacatgatccccattgaaaacttgatgaaccccagagcccttgatttccacgcagag
accagcttcatttacttcgctgacactaccagctacctgattggccgacagaaaattgat
ggaacagatcgggaaacaattctgaaagacggcattcataacgtagaaggcattgctgtg
gactggatggggaacaatctctactggactgatgacggacccaagaaaaccatcagtgtt
gcccggctagaaaaagctgcccagaccaggaagacactcattgaagaaaggatgattcac
ccacgagccattgtggtggatcccttgaatggatggatgtattggacagattgggaagaa
gatccaaaggacagtaaaagaggaaagatagaaaaggcttggatggatggcaccaatcgc
agtgtattcatcacttccaagaccgtgctgtggcctaatgggctgagcctggacatcccc
tctaagatgttgtactgggttgatgcctactatgatcggattgagatgatcatgctggat
ggcacagaacgcaagatggtttatgatggaagcgagttgagtcatgcctttgggttgtgc
cactatgaccatttcctcttctggacagagtaccgaagtggtagcatctttcgtttggac
cagaataccaaggctgttacactgttgcgcaacgagcgcccaccgctctttgagattcgc
atgtatgatgctcagcaacagcaagttggctctaacagttgccgagtgaacaatggaggc
tgcagcagtctttgcttggctatcccaagtggcagacgttgtgcctgtgcagaagaccag
attttgggaccagattctgtcacttgtcaagccaatccatcttacgttccacctccacaa
tgccagcctggggaatttgcttgcaagaatagtcgatgtatacaggagcgatggaaatgt
gatggggacaatgactgcctggacaacagtgatgaggcacctgaactctgccatcagcac
acatgcccttcagaccgcttcaaatgtgagaataatcgttgcatccccaaccgctggcta
tgtgatggggataatgattgcggcaacaatgaagatgaatctaattccacatgctctgct
cgtacgtgtcccaccaaccagttctcctgtgccagtggccgttgcatccctaactcttgg
acctgtgacttggatgatgattgtggggatcgctctgatgaatcagcatcatgtgcctac
ccgacttgtttccctctgacccagtttacttgccacaatggccgctgcatcaatatcaat
tggagatgtgacaatgacaacgactgcggggacaacagtgatgaagctggctgcagccat
tcctgctccagcaaccagttcaaatgcaacagcgggcgctgcattcctgtccattggacc
tgcgatggggacaatgactgcggagactacagcgatgagactcatgccaactgcaccaat
ctggcaacccgcccacctggaggctgccatatagatgagttccaatgccgactggacgca
ctctgcattcccatgcgctggcactgtgatggtgacactgactgtatggactctagtgat
gagaagaactgtgagggtgtcactcatgtctgtgatccaaatgtgaagtttggctgcaag
gattctgcacggtgtatcagcaaagcttgggtatgcgatggagacaatgattgtgaggac
aattctgatgaagagaattgtgaggctttggtgtgcaaaccaccctcccacacatgtgcc
aatacaacatctatctgcctcccccctgagaagctgtgtgatggaaatgatgactgcggg
gacggttctgatgaagggcaactgtgtgatctttgctctttgggcaacgggggctgcagc
cacgactgtgcggtagcaccaggagagggcattgcctgctcatgccctctaggaatggag
cttggtgctgataacaagacctgccagatccaaagctactgtgccaagcatctcaagtgc
agtcaaaagtgtgagcagttcaagtacaacgtgaagtgctcttgctatgaaggatggatg
ctggagtctgatggtgagagctgtcgcagtttggacccgtttaaacctttcatcatcttc
tccaatcgccatgagatccggcgtattgacttacacaagggagattatagcgtcttagtg
cctggcttgaggaacaccattgccttggactttcatctgaatcagagctccctctattgg
actgacgtggtagaagacaagatataccgagggaaattgcatgagaatggagccctaact
agctttgaggtggtgatacaatatgggctagctactcctgaaggacttgctgtggactgg
attgctggcaacatctactgggtggagagcaacctggaccaaattgaagtggctaagcta
gacgggacaatgaggagcaccttattggctggggatatcgagcatcctcgtgctattgcc
ctagacccacgatgcgggattctcttctggacagactgggatgccagccttcctcgcatt
gaggcagcttctatgagcggccagggccgacgtgtcattcacaaggaaacagggtcaggc
ggctggccaaatgggctcacagtggactacctggaaaagcgtatcctgtggattgatgcc
agatcggacgcaatctactctgccctctatgatggcacaggccacattgaggtgcttcga
ggccatgagtatctgtcacatccctttgctgtcaccttgtacggtggtgaagtgtattgg
accgactggcgcacaaataccttggccaaggctaacaagtggacaggccacaatgtcacg
gtcgtgcagcgaaccaacacacagccctttgatttgcaggtctatcacccctctcgccag
cctgtagctcccaatccttgtgaggccaatggaggaaaaggccattgttcccacctctgt
ctcatcaactacaatgggacttactcctgtgcttgcccccacctgatgaagctggataag
gacaatgccacttgctatgaatttaagaagttcttgctttatgcacgccagatggagatc
cgaggtgtggacatagacaacccatattacaattacattaactccttcactgtgcctgac
attgacaatgtcactgtggttgactatgatgctctggaacaacgtatctactggtcagat
gtccgcacacaaaccatcaagcgggcgttcatcaatggaacaggcgttgaaacagttgtt
tctgcagatttacccaacgcccatggcttgtctgtggactgggtctcaaggaaccttttc
tggaccagctatgatgccaacaagaaacagattaatgttgcccgactagatggctccttt
aagaatgctgtgattcagggactggacaaacctcattgtttggtggttcatcctctcaaa
gggaaactctactggacagatggagacagcatcaatgtcgccaacatggatggaagcaac
cgtagtcttctcttcacaaaccaaaaagggcctgttgggctctccattgactacaaagaa
aacaagctctactggataagctctggcaatggcaccatcaatagatgcaatttcgatggc
agcgatttggaggtgttggagactatgaagaaccaactgcgcaaagccacagcattggct
ataatgggtgataagttgtggtgggctgaccaggcctctgaaaaaatgggcacctgcaac
aagaaagatggatcggacgcagtcgtattacgcaacagcaccactcttgtaatgcacatg
aaaatctatgatgagatcatccagcaacagggtatcaacccttgcagtgtgaacaatggt
gaatgctcacaactctgccttcctacatcagacactactcgttcctgcatgtgtacagct
ggctacagcctgaagagcgggcagcaatcctgtgaaggtgtcggctccttcctcctctac
tcagtacatgaaggtatccgtggcatcccattagatcccaatgacaagtctgatgcactg
gtgccagtctctgggacttcgctggctgttggcattgatttccatgctgataatgacact
atctattgggtggacatgggtatgagcacaatcagtcgagccaaacgggaccagacctgg
agagaggatgtcgtgaccaatggcattggccgagtggaagggattgctgtggactggatt
gcaggaaacatttattggacagaccagggctttgatgtcattgaagtcgccaggctcaac
ggttcattccgctatgtagtgatttcacagggattggataagccacgtgccattacagta
cacccagagaaaggataccttttttggacagagtggggccagtaccctcgtattgaacgt
tctcggctggatggaacagagcgtgtggtcctcatcaacagcagcatcagctggcccaat
gggatttctgtcgattatgaagatgggaaactttactggtgtgatgctcggacagataag
attgaacgcatagacctagagactggcgataagagggaggttgtcctatccagtaacaac
atggatatgttctcggtatctgtctttgaggattatgtctactggagtgacaggactcac
gcaaatggttccattaaaaggggcagcaaggacaacgcaacagaaattgtgtctctacgc
acaggaataggagtacagctgaaggacatcaaggtgttcaacagagacaggcaaaagggt
accaatgtgtgcgcgcagaataatggtgactgtcagcaattgtgtctgtatcgaggagca
ggtcagcggacatgtgcctgtgcccatggaatgctcgctgaggacggcgtaagctgccgt
gactacgatgggtacctgctctattcagaacggaccattctcaaaagtatccacttatcc
gatgagaacaatctcaacgcacccattaagccatttgaagacagtgagcacatgaaaaac
gtcatcgccttggcctttgattaccgccacggcagcaagggcagcaaccgcatattctac
agtgacattcattttggcaatatccagcaaatcaatgatgatggaactgggcgaagaact
ctagttgaaaaccatcatgagattcaggttttgggggtaaaggaggaacaggaaaagcca
ggaaaacagcaggtcagggaaaatttgggagttcagccagtgggatatgcatctttggga
taccagcaatggtgtagtttaggggaaggaaagaaagggctaaaaagaacagttcctcct
aaagctattaatacgtgcatctctcaacagatatttactttagggctgtgtactaaggta
aatccaggttttatgaccatgactaagattccagtggaaggcggggtcggggagagggga
acgagcctttttgtctgg
DBGET
integrated database retrieval system
