Crotalus tigris (Tiger rattlesnake): 120318299
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Entry
120318299 CDS
T08476
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120318299 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120318299 (LMO7)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120318299 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
LIM
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
120318299
NCBI-ProteinID:
XP_039221657
LinkDB
All DBs
Position
Unknown
AA seq
2013 aa
AA seq
DB search
MDGREDRRAAFVEARRWVEAVTGKSFGSKGFRAALENGILLCDLINKIKPGIIKKINRLS
TPIAGLDNINVFLKACENLGLKEAQLFHPGDLQDLSNRVTVKQEETDRRVKNVLITLYWL
GRKAARSPSYYGPHLDLKAFEKLLGQALTKALGESYSPKQSGRDSGYGDFWCTERIDPLS
LSTNHKRDDSLDSLDSFGSRSSTSFSSDLTLKGGSEDFESDTDSETRARMHDPGKDDMSY
RRVALIEPKPAAEFNRFLPSKTKPPTYMPAPLRKKRIEKNEDNRRSWASPVFTEPDGNFS
SNHRRILGPGMERKSATYILSDFSNYLEEEEEEEEKTTGIPDIEADDLYARKISAAVSAV
KLSSHKFLPKSWAPGEELHWKKAQRISFSKQWYKEIQGFSNLADAEEEDAKVQPSHSIMD
SLGIRCQEDAQPTKPTTEIAAGELPSQFLFLRALQKYSEGHLSSDHRTEVDPSSGPRLIT
CRKYNYLRPGCDQRIHEIRDFYPDLENDDLFVRKTGASHANPVVLQDFEYFRRSCQQSPR
IEGEIVLQPRDGEEEIFPDLEKDDFTVRKAQLQKKEVPLSGAPDKYQPALFPDPWSLPPE
IQAKFLCLLEKSTLKSERESRGKVLSPSSRQKKDDMLTRKMELLCLGGNVQRKSFFPGVC
SKQDMEKWETIREASRIRHKKRQMVDRLLQKISEEHGSKSLNDVSADELQTIRQMRYEEL
QKIKTQLREQDQQWQDDLAKWKSRRRSHTSDLQRKKEEREEIERRALESSERRSKTLKEM
QRDRERRDQAPLRNSWQEMEQSYFSNEDVFREEKASPKVCVPTEANGGLKREDDHELKDQ
KPERGVKDEPLTSIDSLAGVRMEPPLPSSRSSNAQTGSGQVSASLPRSYQKTDTARLTSV
VTPRPFGAPMRGIASLPRSFTMDAAMKYNGGMEGPRNAQSGHSRGSEAQTGGSQQGQGQM
EQRVAEGSKTRTSRLLEEQRRRTPELDPKSDHHTGPDSMTIRSSAPKERTLSGTEESRQH
EQYSDMRISINQKPGSSRSFGFAVYQNPSGVFVKSIEEGSPADFCQLKVGDEILSLGGTS
VSHLEQGEWEAAICQALENGCLVMDVRRHGRKDWGKDQPFPPFARHKILNLTSMATKIIG
TSENKWIDATSGDHASTQSQQMSKKELHSHLQNDGSETKVNGMQDDASCCEQKDTEPISL
KNLKRRSQFFEQGASGSLYNSWVYLCGGQEPAILDLPVPPIAAPSRWTWDQEEERKRQEK
WQAEQERLLQEQYKREQERLKEEWLKAQREAEKDISSYLKEEQTNLTCPALTGSVQEVPT
FLWERNGSNKTDCHSSERNWEEESRPEYQGKDSELARSSLQQQGVLQVEQKRKLQGIENG
KGWNGQDTVYYAKEPSYPEEVPQKSQVEVVKEPRHWEETSQNLLMEPINEPKYGGETSQN
LLFEPIKEPGYQEDTSQKLLLEPLKEPRFWEEKSHKTHVEITKELRYQEEPSPNLLMEPI
KEPRYREEASCELLMEPIKEPRYRGETSKDLLMEPIKEPRYREETSKDLLMEPIKEPRYR
EETSKDLLMEPIKEPRYREEASKDLLMEPIKEPRYQEEASQKLLVEPIKEPRYWEEASQD
LLIEPIKEPSYQEEASRDFLMEPVKEPRYRKEVSRDFLMEPVKEPRYREEASRDFLMEPI
KEPRYQEETSKDLLMEPIEEPRYREEAFQKPLVEPVKEVSVQRFQYQRHYESPRLSNEQG
KYFSVDRNKSRSTTDLDNPQPSGLKKKFSEQSWNATNSLKRSQKEQGLSSAELERQQILQ
EMRKKTSLHTDSSWIRQRSSSMHKEPFSLAGNRMRRGESLDNLDSSRTNSWRPHSWVNQS
ASSTSLSSSQELGQHVAPVVSTSNRAYMRTPSSSLPSPSSASMKTSSLPHIPPSPTVPQA
PSPTSSSQSGTQQRNRSVSGKRMCSSCRNALGKGAAMIIESLGLCYHLHCFKCVACEGDL
GGSQAGAEVRIRNSELFCNSCYLRFKTGQATTM
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgagaggacaggcgcgcagccttcgtcgaagcccgccgctgggtcgaggca
gttactgggaaaagtttcggaagcaagggttttcgcgctgctttggaaaatggaatcctt
ctctgtgatctaattaacaagatcaaacctggcatcattaaaaagatcaatcgactgtca
acaccaatagctggactggataatatcaacgtcttcttgaaagcctgcgaaaaccttgga
ttaaaagaagctcagctttttcatcctggtgaccttcaggatttatctaatcgagttacc
gtcaaacaagaagaaactgaccgaagagtaaaaaatgttttgattaccttgtactggctg
ggcagaaaagcagcccgcagcccttcctattatggcccccaccttgatttgaaagccttt
gagaaattgcttggacaagccttgaccaaggccttgggggaatcctacagccccaaacaa
agtgggagagatagcggatacggggatttttggtgcaccgaacgtattgatccgctttca
ttgtccaccaatcacaagcgggacgattccttagacagcttggattcttttggctccaga
tcttccaccagcttctcttcggatctcactctgaaaggtggcagtgaagattttgagagt
gacacggattctgagacacgcgccagaatgcacgaccctggcaaagatgacatgtcctac
cgccgagttgccttaattgaacccaagcctgctgcagaattcaaccgtttcctgcccagc
aaaaccaagccaccaacttatatgccagctcccttaaggaagaagagaatcgagaagaac
gaagataacagaagaagctgggcgagtcccgtatttactgaaccggatggaaatttttcg
agcaaccacagaagaattttggggcccgggatggaacgcaagtcagcaacttacattctt
tcagacttctccaactatttggaggaggaagaagaggaggaggagaaaaccacgggcatc
ccagacattgaagccgatgacctttatgctcgcaaaataagtgctgctgtatcagctgta
aaactttcctctcataaattcctccctaagtcttgggctccgggtgaagagttgcactgg
aaaaaagcacaaaggatatctttttccaaacagtggtataaggaaattcaaggattcagt
aacttggcagatgctgaagaggaggatgcaaaagtccagcccagccacagcatcatggac
agcttgggcatcagatgccaagaagatgctcaacccaccaagccaaccactgaaattgct
gcaggcgaactgccaagccagtttttatttcttcgagccctgcaaaagtattcagagggc
cacctgtcttctgaccatagaaccgaagttgacccatcttcagggcctcggctcataaca
tgcagaaaatataattaccttaggccaggctgtgaccaaagaatccacgagattagagac
ttttacccagatctggaaaacgacgatttgttcgtccgtaagaccggtgcctcccacgcg
aatccagtcgttctccaagattttgagtattttaggaggtcttgtcaacaaagtccacgg
atcgaaggagaaattgtgcttcagcccagagatggggaagaggaaatatttccagattta
gaaaaagatgacttcactgttcgcaaagctcaactgcaaaagaaagaagtgcctttatcg
ggtgcccctgacaaataccagccagccctcttcccggacccttggagtctgcccccagaa
atccaggccaaatttctatgcttgctggagaagtccacccttaagagtgaacgtgaaagc
agaggaaaagtcttatctccttcttcaaggcaaaagaaagacgatatgttgacccgaaaa
atggagctgctctgcctaggagggaacgtgcaacgcaagagcttctttccaggagtgtgt
agcaaacaagatatggaaaaatgggaaaccatcagagaggccagcagaatcaggcataag
aaacggcaaatggttgacaggctgttgcaaaagatttctgaggaacatgggagtaaatcc
ttgaatgacgtcagtgcagatgagctacaaacgatccggcagatgcgttacgaagagctc
cagaaaataaaaactcagctgcgggaacaagatcagcagtggcaagatgatctggcaaaa
tggaaaagtaggcgcaggagccacacctctgatctgcaaaggaaaaaggaggagagagaa
gaaattgagcgaagagctttggaaagctcggaacggcgcagtaaaaccctgaaagaaatg
cagagagacagagagaggcgagatcaagctcctctgaggaactcttggcaagagatggaa
caatcgtatttctcaaacgaagacgtctttagggaagagaaagcatctcccaaagtctgt
gttccaaccgaggcaaatggaggcttgaaaagggaagatgatcatgagctaaaggaccag
aaaccagaacgtggggtgaaggatgagcctctcacctcaatagacagcctggctggagta
aggatggagcccccattgccaagttcccggtcatcaaatgcccaaactggatctggtcag
gtttcagcatctctaccaagaagttatcagaagaccgacaccgccaggttgacatcggtg
gtcaccccgaggccttttggggcccctatgagaggaatcgcctcgcttcccaggtccttt
acgatggatgcagccatgaaatacaatggaggaatggaggggcccaggaatgctcagtca
gggcacagcaggggctctgaagctcagacaggagggtcacaacaaggccaaggccagatg
gagcaacgagttgcagaaggcagcaaaaccaggacaagccgcttactggaggagcagaga
aggagaacacctgagttggaccctaaatcagatcatcacaccggtcctgattcaatgacc
attagatcttctgctcccaaagagagaaccctttcaggcactgaggagtcaagacagcac
gagcaatacagcgatatgagaatcagtataaatcagaaaccaggcagcagtcgtagcttt
ggatttgccgtgtaccagaatccttctggtgtctttgtaaaatcaatagaagaagggagc
cctgcagatttttgtcagttgaaagttggggatgaaatcctgtcccttgggggcaccagt
gtttcacacttggagcagggcgagtgggaagccgccatttgccaggccctggaaaatgga
tgccttgttatggacgtgaggcggcatggaaggaaggattggggcaaagaccagcctttc
ccgccatttgcaaggcacaaaatcctcaatcttaccagtatggctaccaaaattataggt
acatctgaaaacaaatggattgatgccacatcaggagatcacgcttcaacgcaaagtcaa
cagatgtccaaaaaggagttgcacagccatttgcagaatgatggttctgaaacaaaagtc
aacggaatgcaggatgatgccagctgctgtgaacaaaaagacacagaacctatttctttg
aaaaacttaaaaaggcgatcccagttttttgaacaaggagcatcaggttccctttacaat
tcatgggtgtatctttgtggaggtcaggagcctgcaatacttgatctccctgtcccaccc
attgcggctcccagccgttggacttgggatcaagaagaagaaagaaaaaggcaagagaaa
tggcaagcagagcaggagcgcttactccaggagcagtacaagcgtgagcaagagaggctt
aaggaagaatggctgaaagcccagcgggaggcagaaaaagacatctccagttacttaaag
gaggaacagactaacctgacgtgccctgctctaaccgggagtgtacaggaggtcccaact
tttttgtgggaaagaaatggaagtaacaagactgattgtcatagttctgaaagaaattgg
gaagaggaaagcaggccggagtaccaggggaaagatagtgagctagcgagaagcagctta
caacaacaaggagttttacaggtggagcaaaagagaaagttacaaggaatagaaaatggg
aagggatggaatggacaggacaccgtatactatgcaaaggaaccaagttatccagaagaa
gtacctcaaaaatcccaggtagaagttgtcaaggaaccaaggcattgggaagaaacatct
caaaatcttctgatggagccaattaatgaaccaaaatatggtggtgaaacatctcagaat
ctactctttgaacctatcaaagaaccagggtatcaggaagacacatctcaaaagttactg
ctggaaccactcaaggaaccaagattttgggaagaaaaatctcacaaaactcatgtggaa
ataaccaaggaattaagataccaggaagaaccatctccaaacctgctgatggaacctatc
aaggaaccaaggtatcgggaagaagcatcttgtgagctgctgatggaacctatcaaggaa
ccaaggtatcggggggaaacatctaaggacctgctgatggaaccgatcaaggaaccaagg
tatcgggaagaaacatctaaggacctgctgatggaaccgatcaaggaaccaaggtatcgg
gaagaaacatctaaggacctgctgatggaaccgatcaaggaaccaaggtatcgggaagaa
gcatctaaggacctgctgatggaaccaatcaaggagccaaggtatcaggaagaagcatct
caaaagctgttagtggaacctatcaaggaaccaaggtattgggaagaagcatctcaggac
ctgctgatagaacctatcaaggaaccaagttatcaggaagaagcatctcgagactttctg
atggaacctgtgaaggaaccaaggtatcgaaaagaagtatctcgagactttctgatggaa
cctgtgaaggaaccaaggtatcgagaagaagcatctcgagactttctgatggaacctatc
aaggaaccaaggtatcaggaagaaacatctaaggaccttctgatggaaccaatcgaagaa
ccaagatatcgtgaagaagcatttcaaaagccgctggtggaaccagtcaaggaggtgtca
gtgcaaagatttcagtatcaaagacattatgaatcaccaagactctccaatgaacaagga
aagtacttcagtgtggacagaaataaatccagatcaaccactgatttagacaatcctcag
cccagtgggctgaagaagaagttctctgagcaatcctggaatgccaccaactccctgaaa
agatctcagaaggaacagggcttgtcatccgccgagctggaaaggcagcagattcttcag
gaaatgagaaaaaagacctctctgcacacagacagcagctggatccggcagcgcagctcc
agcatgcacaaagagcccttcagtctggccggcaatagaatgaggagaggtgagagctta
gataatcttgactcttcaaggacaaactcctggagacctcattcctgggtgaaccaatct
gcatcttctacatctttatcaagcagccaagagttaggccagcatgttgctcccgtggtg
tccacctccaatcgggcctacatgcgcaccccgtcttccagcctgccctccccttcctct
gcatctatgaaaacgtcctccttgccccacatccccccatcaccaactgttcctcaagct
ccttcgccaacctcttcttctcagtctgggacgcaacagcgcaacaggtcggtgagtgga
aagcgaatgtgttccagctgcagaaacgctctgggcaaaggagcggctatgatcatcgaa
tctcttggcctttgctatcacttacattgttttaagtgtgttgcttgtgagggggatctt
ggcggatcacaagccggagcagaagtccgtatccgaaacagcgaactcttctgcaacagc
tgctatctcagatttaaaactggacaggcgaccaccatgtga
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integrated database retrieval system
