Crotalus tigris (Tiger rattlesnake): 120318505
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Entry
120318505 CDS
T08476
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04120
Ubiquitin mediated proteolysis
ctig04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120318505 (SYVN1)
04120 Ubiquitin mediated proteolysis
120318505 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120318505 (SYVN1)
Enzymes [BR:
ctig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120318505 (SYVN1)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120318505 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
New_glue
zf-RING-like
zf-ANAPC11
FAR1_N
zf-HC5HC2H
zf-Nse
zf-C3H2C3
zf-RING_Vps41
Endonuclease_7
Prok-RING_4
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
120318505
NCBI-ProteinID:
XP_039222136
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MFRTAIMMAASLALTSAVIAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLIVLLAILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTVFIKYLLHSIDLQSENPWDNKAVFMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQPPPEQQEGGQHPPPHQA
PLMPQPPNFPQGLLPPFPPGMFPLWPPMAPFPPMPGVQPPNNTDGASVAASSPPGAQGAG
TTRPSGDSATTSDAAASAGTMPGFPFPPPPWMGMPFPPLFGFPPMPVPPSGFAGLTEEEL
RAMEGHERQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGMPRAPPAPASASTPSTA
PPETPTSPESNASEPTTSTTQPADSTSSQDTSPDKAEGPMQPSSPDEDPSSPEEPNAAEL
RRRRLQKLELPSSPSH
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgttccggaccgccatcatgatggctgccagcctggccttaacctccgccgtgatagct
cacgcctattacctgaagcaccagttctaccccaccgtggtgtaccttaccaagtcaagt
cccagcatggcggtgctctacattcaggcttttgtgttggtgttcctactaggcaaattc
atgggcaaagtgtttttcggacaactccgagcggcagaaatggagcatctgctcgaacgc
tcgtggtatgccgtgaccgagacctgcctcgcctttaccgtcttcagggatgactttagt
cctcgttttgtggctctcttcaccctcctcctcttcctcaagtgcttccattggctggct
gaagaccgggtggactttatggagagaagtcccaacatatcttggctcttccatttccgc
attgtctctcttatcgtgcttttggccattttagactttctgttcgtcagccacgcctac
cacagcatcctgacccggggggcctctgtccaactggtctttggctttgagtatgccatt
ctcatgacgatggtgctgaccgtcttcattaaataccttctacactccatcgacctgcag
agcgaaaatccctgggacaacaaggccgtcttcatgctctatacagaactcttcacaggt
ttcatcaaggtccttctctacatggcctttatgacgattatgatcaaagtacacaccttc
ccgcttttcgccatccggcccatgtacctggcaatgaggcagttcaaaaaggcagtcacg
gatgcaattatgtctcgtcgggcgatccgcaacatgaacacactgtaccccgatgccacc
ccggaagagctgcaggccatggacaacgtttgcatcatttgccgggaggagatggtgacg
ggtgcgaaacgcctgccttgcaatcacatattccataccagctgcctccggtcctggttc
cagcgccagcagacctgccccacctgccggatggacgtcctgcgcgcctccctgcccacc
cagtcgcagccgccccccgagcagcaagaaggggggcagcatccgcccccccatcaggcc
ccactgatgcctcagccgcccaactttccccaaggcctcctgcctccgtttcctcccggg
atgttccctctgtggccacccatggctcccttccctccaatgccgggcgtccagcccccc
aataacaccgacggtgcctccgtggctgcgtcttctccaccaggagcccaaggggcaggc
accaccagacccagcggggattcggccaccacgtcggacgccgcggcctccgcagggacc
atgccggggttccccttccctcctcccccttggatggggatgccgttcccccctctcttt
ggcttccctccgatgccggtccccccctcaggatttgcagggctgacggaggaggagctg
cgggccatggagggccacgaacggcagcacttggaagcccggctgcagtgtctccagaac
atccacactcttctcgacgcagccatgctccagatcaaccagtatctcactgtgctggca
acaattgggatgcctcgagctcccccagcacctgccagtgcttcaaccccttcgacggcc
ccccctgagaccccgactagccctgagtcaaatgccagcgaacccaccacctcgaccacc
cagccagcggacagcacctcttcgcaagacacatctccagacaaagcagagggtccgatg
cagccctccagccccgatgaggacccctcctccccggaagagcccaacgccgcggagctg
cgcagacgccgccttcaaaaactagaactgccttcttctccgtctcattga
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